CF835257

Overview
NameCF835257
Unique NameCF835257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:233..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.606e-13
Identity = 48/174 (27.59%), Postives = 86/174 (49.43%), Query Frame = 3
Query:  132 LWLVFTLVWVMALSFVSRGRHKQ--LPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDR--MVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAF 641
            L  +F +  V  +  V + +H +  LPP P  +PVIGNL ++G  PH+S  +LA+  G +M L  G V   V+SS   A+ +L+ HDL  C R  +V   ++S  F      +++ P    W+  RK     +F  +K+     +  ++   L+  + ++      +D+ ++ F
Sbjct:    5 LLCLFLITLVSLIFVVKKIKHSKWDLPPSPPTFPVIGNLHQVGELPHRSFQRLAERTGHVMLLHFGFVPVTVISSREAAEEVLRTHDLKCCTRPKLVGSRLISRGFK----DISFTPYGEEWRERRKFLVRELFCFKKVQYFGYIVEEECNLLVKKLTESAVGRPPVDLSKSLF 174          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.740e-13
Identity = 50/144 (34.72%), Postives = 76/144 (52.78%), Query Frame = 3
Query:  108 MDLLI--NCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQ 530
            MDLL+    +L L    +  +A+S + RGR  +LPPGP P P+ GN L++G    H++L  LAK  G I  LR+GQ   VVVSSP +AK +L    + F  R     ++   F      + +      W+ +R+I  +  FT++
Sbjct:    1 MDLLLLEKTLLGLFIAAITAIAISKL-RGRRFKLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSR--TRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNK 141          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.578e-13
Identity = 44/150 (29.33%), Postives = 83/150 (55.33%), Query Frame = 3
Query:  189 RHKQLPPGPRPYPVIGNLLELGAKPHKSLAKL-AKI-HGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRA--GKAIDV 626
            +H+  P  P   P+IG+L  +G+ PH S   L AK  H  +M +++G V T+VVS+P  A+A+L+ HD     R  P   ++    ++   +A+ P    W+  RK+ N H+ +++ + + +  R ++++ ++A + D   A  G A+D+
Sbjct:   52 QHRLPPTPPGKLPIIGHLHLIGSHPHVSFRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASR--PRNPVADIIRYNSTDVAFAPYGVYWRTARKVVNTHLLSAKMVFSKRREREEEVRLVVARIRDAAEASPGTALDM 199          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13
Identity = 49/144 (34.03%), Postives = 76/144 (52.78%), Query Frame = 3
Query:  108 MDLLI--NCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQ 530
            MDLL+    +L L    V  + +S + RG+  +LPPGP P P+ GN L++G    H++L +LAK  G I  LR+GQ   VVVSSP +AK +L    + F  R     ++   F      + +      W+ +R+I  +  FT++
Sbjct:    1 MDLLLLEKTLLGLFLAAVVAIVVSKL-RGKRFKLPPGPLPVPIFGNWLQVGDDLNHRNLTQLAKRFGDIFLLRMGQRNLVVVSSPDLAKEVLHTQGVEFGSR--TRNVVFDIFTGEGQDMVFTVYGEHWRKMRRIMTVPFFTNK 141          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12
Identity = 56/175 (32.00%), Postives = 88/175 (50.29%), Query Frame = 3
Query:  114 LLINCILWLVFTLVWVMALSFVS--RGRHKQLPPGPRPYPVIGNLLELGAK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVG 629
            LL+   L  +F  +  +A  F+S  RG+  +LPPGP P P+ GN L++G    H++L  LAK  G I  LR+GQ   VVVSSP++AK +L    + F  R     ++   F      + +      W+ +R+I  +  FT++ +   Q+ R     +  A V+D  +  KA   G
Sbjct:    4 LLVEKTLLALFAAI--IASIFISKLRGKRFKLPPGPVPVPIFGNWLQVGDDLNHRNLTDLAKKFGEIFLLRMGQRNLVVVSSPNLAKEVLHTQGVEFGSR--TRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVV---QQYRTGWEAEAAAVVDDVKKNPKAATEG 171          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.776e-12
Identity = 47/140 (33.57%), Postives = 71/140 (50.71%), Query Frame = 3
Query:  114 LLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQ 530
            LL+   L   F  + V  L    RG+  +LPPGP P PV GN L++G    H++L  LAK  G I+ LR+GQ   VVVSSP ++K +L    + F  R     ++   F      + +      W+ +R+I  +  FT++
Sbjct:    4 LLLEKTLLGSFVAILVAILVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDILLLRMGQRNLVVVSSPELSKEVLHTQGVEFGSR--TRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNK 141          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.776e-12
Identity = 54/163 (33.13%), Postives = 88/163 (53.99%), Query Frame = 3
Query:  141 VFTLVWVMALSFVSRGRHKQ-LPPGPR-PYPVIGNLLELGAKPHKSLAKL-AKI-HGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKA 617
            V  L+  +A S  S GR K  LPP P    P++G+L  +G + H SL +L AK  H   + LR G V T++VSSPS A+A+++ HD     R  P ++ S    ++   +A+ P+   W+  RK+ N H+ +++K+ + +  R +++      V DN R   A
Sbjct:   35 VLLLLASLAKSTSSSGRGKPPLPPSPPGTLPIVGHLHHIGPQTHISLQELVAKYGHNGFLFLRAGAVPTLIVSSPSAAEAVMRTHDHICASR--PWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGREEEV----CLVVDNLREAAA 191          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.319e-12
Identity = 48/140 (34.29%), Postives = 70/140 (50.00%), Query Frame = 3
Query:  114 LLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQ 530
            LL+   L   F  V V  L    RG+  +LPPGP P PV GN L++G    H++L  LAK  G I  LR+GQ   VVVSSP ++K +L    + F  R     ++   F      + +      W+ +R+I  +  FT++
Sbjct:    4 LLLEKTLLGSFVAVLVAILVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPDLSKEVLHTQGVEFGSR--TRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNK 141          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.319e-12
Identity = 47/140 (33.57%), Postives = 71/140 (50.71%), Query Frame = 3
Query:  114 LLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQ 530
            LLI   L  +F  +    L    RG+  +LPPGP P P+ GN L++G    H++L  LAK  G I+ LR+GQ   VVVSSP +AK +L    + F  R     ++   F      + +      W+ +R+I  +  FT++
Sbjct:    4 LLIEKTLVALFAAIIGAILISKLRGKKFKLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGEILLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSR--TRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNK 141          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.319e-12
Identity = 45/154 (29.22%), Postives = 82/154 (53.25%), Query Frame = 3
Query:  147 TLVWVMALSFVSRGRHKQ--LPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDR---MVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVE 593
            TL+ ++  S + R   K   LPP P   PVIGNL +L    H+SL  L+  +GP+M L  G+   ++VSS  +A  +++ HDL   +R    V + ILS         +A+ P    W+ ++ I   ++  ++ + + +++R ++IK ++  +E
Sbjct:   12 TLLALLLKSILKRTATKNFNLPPSPWRLPVIGNLHQLSLHTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILS-----GGRDVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLE 160          
The following BLAST results are available for this feature:
BLAST of CF835257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
C71BG_ARATH1.606e-1327.59Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
TCMO_GLYEC2.740e-1334.72Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
C71C1_MAIZE3.578e-1329.33Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
TCMO_PHAAU7.971e-1334.03Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
TCMO_ZINEL1.360e-1232.00Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_POPTM1.776e-1233.57Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
C71C3_MAIZE1.776e-1233.13Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
TCMO_POPKI2.319e-1234.29Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_HELTU2.319e-1233.57Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
C71AK_ARATH2.319e-1229.22Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O20_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835257 ID=CF835257; Name=CF835257; organism=Citrus sinensis; type=EST; length=660bp
TTTTTTGGGTATCCATAAGAAGCACATGTAAACCAATGCGTGAAAAAACC
TATGTATAGATACGGGGTTACAGTGTGCTAAACCAAAATATCAACTTCAA
TTCAAAGATGGATTTGTTAATTAACTGCATACTGTGGCTTGTATTCACAT
TGGTTTGGGTGATGGCTTTAAGTTTCGTTTCCAGAGGACGACACAAACAG
CTTCCACCGGGACCGAGGCCTTATCCAGTGATCGGAAACCTTCTGGAGCT
AGGTGCTAAACCTCACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGGC
CCATAATGAGTCTAAGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCT
CCAAGCATGGCCAAAGCCATCCTTCAAAATCATGATTTATCATTCTGTGA
TCGAATGGTCCCTGAAGCAATCTTGTCACTGCCCTTCCCGCACCATGAAT
TCAGTTTGGCCTGGCTTCCAGTTTCAACAATGTGGAAAAATCTTCGAAAA
ATAAGCAACATGCATATTTTCACTAGTCAGAAACTCGATGCCAATCAAGA
GCTCCGGCGCAAGAAAATCAAAGACCTTCTTGCTCATGTTGAAGACAATT
GCCGTGCGGGTAAAGCAATAGATGTTGGCCAAGCTGCTTTCAATACTTCA
CTTAATTTAT
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