CF835272

Overview
NameCF835272
Unique NameCF835272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_ERWCT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Erwinia carotovora subsp. atroseptica GN=metE PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 4.610e-53
Identity = 104/164 (63.41%), Postives = 121/164 (73.78%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P +I GDVSRP+A+TV W+  AQS+T +PMKGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI +IQIDE ALREGLPL +S+   YL WAV +FR+     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E
Sbjct:  516 CVKPPVIIGDVSRPEAITVEWAKYAQSLTDKPMKGMLTGPVTILCWSFPREDVTRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLHRSDWDAYLAWAVDAFRLNAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE 679
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_DESVM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=metE PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 4.610e-53
Identity = 103/162 (63.58%), Postives = 126/162 (77.78%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            CV P ++YGDV+RP  MTV W + AQS+T +P+KGMLTGPVTI  WSFVR+D PR     Q+ALAI+DEV DLE AGI VIQIDE ALREGLPLR++ HA YLD AV +FR+ + GV+D TQIHTHMCY +F+DII  +  +DADVI++E SRS  +LL VF
Sbjct:  542 CVKPPLLYGDVARPGPMTVRWITHAQSLTQKPVKGMLTGPVTIACWSFVRDDVPRPVVFRQLALAIRDEVADLEAAGIGVIQIDEPALREGLPLRRAAHAAYLDAAVGAFRLASSGVRDATQIHTHMCYCDFHDIIDHVAALDADVISLEASRSRMELLDVF 703
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_PROMH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Proteus mirabilis (strain HI4320) GN=metE PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 6.021e-53
Identity = 100/162 (61.73%), Postives = 122/162 (75.31%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            CV P +I GD+SRP  +TV W++ AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV+DL+KAGI +IQIDE ALREGLPLR+ E   YLDWAV +F+++     D TQIHTHMCY  FNDI+ +I  +DADVITIE SRSD +LL  F
Sbjct:  519 CVKPPVIIGDISRPAPITVDWATYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVDDLQKAGIGIIQIDEPALREGLPLRRDEWQAYLDWAVDAFKLSAAIADDETQIHTHMCYCEFNDIMEAIAALDADVITIETSRSDMELLEAF 680
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BIFA0 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=metE PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 6.021e-53
Identity = 106/165 (64.24%), Postives = 124/165 (75.15%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P II+GDVSR + +TV WSS AQS TA+PMKGMLTGPVTILNWS+ R D    E   Q+ALAI+DEV DLEKAGI +IQIDEAALRE LPLR+S+ H  YLDWA+ +FR+ +  VQ +TQIHTHMCYS FNDII  I  MDADVI+ E SR D  +L    +
Sbjct:  527 CVKPPIIWGDVSRAQPITVAWSSYAQSRTAKPMKGMLTGPVTILNWSWPREDITHEEQTKQLALAIRDEVLDLEKAGIRIIQIDEAALREKLPLRESDWHREYLDWAIPAFRLVHSAVQPSTQIHTHMCYSEFNDIISDIDAMDADVISFEASRGDLVVLDAIHD 691
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_MYCTU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 7.864e-53
Identity = 99/159 (62.26%), Postives = 125/159 (78.62%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLL 479
            CV P I+YGDVSRP+AMTV W + AQS+T +P+KGMLTGPVTIL WSFVR+DQP  +T  Q+ALAI+DE  DL+ AGI VIQ+DE ALRE LPLR+++ A YL WAV +FR+   GV D TQIHTH+CYS F ++I +I D+DADV +IE +RS  ++L
Sbjct:  522 CVRPPILYGDVSRPRAMTVEWITYAQSLTDKPVKGMLTGPVTILAWSFVRDDQPLADTANQVALAIRDETVDLQSAGIAVIQVDEPALRELLPLRRADQAEYLRWAVGAFRLATSGVSDATQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVL 680
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_MYCTA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=metE PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 7.864e-53
Identity = 99/159 (62.26%), Postives = 125/159 (78.62%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLL 479
            CV P I+YGDVSRP+AMTV W + AQS+T +P+KGMLTGPVTIL WSFVR+DQP  +T  Q+ALAI+DE  DL+ AGI VIQ+DE ALRE LPLR+++ A YL WAV +FR+   GV D TQIHTH+CYS F ++I +I D+DADV +IE +RS  ++L
Sbjct:  522 CVRPPILYGDVSRPRAMTVEWITYAQSLTDKPVKGMLTGPVTILAWSFVRDDQPLADTANQVALAIRDETVDLQSAGIAVIQVDEPALRELLPLRRADQAEYLRWAVGAFRLATSGVSDATQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVL 680
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_MYCBP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=metE PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 7.864e-53
Identity = 99/159 (62.26%), Postives = 125/159 (78.62%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLL 479
            CV P I+YGDVSRP+AMTV W + AQS+T +P+KGMLTGPVTIL WSFVR+DQP  +T  Q+ALAI+DE  DL+ AGI VIQ+DE ALRE LPLR+++ A YL WAV +FR+   GV D TQIHTH+CYS F ++I +I D+DADV +IE +RS  ++L
Sbjct:  522 CVRPPILYGDVSRPRAMTVEWITYAQSLTDKPVKGMLTGPVTILAWSFVRDDQPLADTANQVALAIRDETVDLQSAGIAVIQVDEPALRELLPLRRADQAEYLRWAVGAFRLATSGVSDATQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVL 680
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_MYCBO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis GN=metE PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 7.864e-53
Identity = 99/159 (62.26%), Postives = 125/159 (78.62%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLL 479
            CV P I+YGDVSRP+AMTV W + AQS+T +P+KGMLTGPVTIL WSFVR+DQP  +T  Q+ALAI+DE  DL+ AGI VIQ+DE ALRE LPLR+++ A YL WAV +FR+   GV D TQIHTH+CYS F ++I +I D+DADV +IE +RS  ++L
Sbjct:  522 CVRPPILYGDVSRPRAMTVEWITYAQSLTDKPVKGMLTGPVTILAWSFVRDDQPLADTANQVALAIRDETVDLQSAGIAVIQVDEPALRELLPLRRADQAEYLRWAVGAFRLATSGVSDATQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVL 680
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_ECO5E (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=metE PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 7.864e-53
Identity = 104/164 (63.41%), Postives = 119/164 (72.56%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P I+ GDVSRP  +TV W+  AQSMT +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI +IQIDE ALREGLPLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E
Sbjct:  516 CVKPPIVIGDVSRPAPITVEWAKYAQSMTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE 679
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_ECO57 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O157:H7 GN=metE PE=3 SV=3)

HSP 1 Score: 206.068 bits (523), Expect = 7.864e-53
Identity = 104/164 (63.41%), Postives = 119/164 (72.56%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P I+ GDVSRP  +TV W+  AQSMT +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI +IQIDE ALREGLPLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E
Sbjct:  516 CVKPPIVIGDVSRPAPITVEWAKYAQSMTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE 679
The following BLAST results are available for this feature:
BLAST of CF835272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_ERWCT4.610e-5363.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DESVM4.610e-5363.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PROMH6.021e-5361.735-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFA06.021e-5364.245-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTU7.864e-5362.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTA7.864e-5362.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBP7.864e-5362.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBO7.864e-5362.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO5E7.864e-5363.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO577.864e-5363.415-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835272 ID=CF835272; Name=CF835272; organism=Citrus sinensis; type=EST; length=513bp
GCTGTGTGAACCCATCCATCATCTATGGTGACGTGAGCCGTCCCAAGGCT
ATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACTGCTCGCCCAAT
GAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTGTCA
GAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCCATC
AAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCAAAT
TGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGCATG
CTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGTGGT
GTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTTCAA
CGACATTATCCACTCAATTATCGACATGGATGCTGATGTGATCACCATTG
AGAACTCTCGTTCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTC
AAGTATGGTGCTG
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