CF835275

Overview
NameCF835275
Unique NameCF835275
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13508 contig Csv1_Contig13508:328..993. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835275 vs. ExPASy Swiss-Prot
Match: CMTD1_MOUSE (Catechol-O-methyltransferase domain-containing protein 1 OS=Mus musculus GN=Comtd1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.096e-20
Identity = 57/152 (37.50%), Postives = 91/152 (59.87%), Query Frame = -1
Query:  216 LATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLVIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 671
            LA ALALP+ G+++  +++ E  +LG P+ ++A V  KID R  PAL  LD ++   +  G+FD   VDADK+N   Y++R ++L++ GGV+     LW G V+ P   P  K V   R+    LN+ +  D R+ I +LP+ DG+++  +I
Sbjct:  118 LALALALPEAGRVVTCEVDAEPPKLGRPMWKQAEVEQKIDLRLQPALQTLDELLAAGEA-GTFDIAVVDADKENCTAYYERCLQLLRPGGVLAVLRVLWRGEVLQP--QPRNKTVECVRN----LNERILRDARVYISLLPLDDGLSLAFKI 262          
BLAST of CF835275 vs. ExPASy Swiss-Prot
Match: CAMT2_DICDI (Probable caffeoyl-CoA O-methyltransferase 2 OS=Dictyostelium discoideum GN=omt6 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.349e-20
Identity = 57/153 (37.25%), Postives = 92/153 (60.13%), Query Frame = -1
Query:  216 LATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL-DLVIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 671
            L  ALA+ D+G+++A D++ E  +  L    KAGV HKI+ +  PA   L +L+ Q E+N  ++DF+F+DADK  Y  Y++  ++L++ GG+I  DN L +G  VA P+A +   +   R     LN  + AD R+   +LP+ DG+T+  +I
Sbjct:   85 LTAALAMGDEGRVVACDVSTEYTQHALKFWAKAGVDHKINLKIQPASKTLQELIDQGEEN--TYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGR-VADPNANVEPNLVAIR----ALNDKILADKRVTKSLLPIADGITLITKI 230          
BLAST of CF835275 vs. ExPASy Swiss-Prot
Match: CAMT1_DICDI (Probable caffeoyl-CoA O-methyltransferase 1 OS=Dictyostelium discoideum GN=omt5 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.349e-20
Identity = 57/153 (37.25%), Postives = 92/153 (60.13%), Query Frame = -1
Query:  216 LATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL-DLVIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 671
            L  ALA+ D+G+++A D++ +  +  L    KAGV HKI+ +  PA   L +L+ Q E+N  ++DF+F+DADK  Y  Y++  ++L++ GG+I  DN L +G  VA P+A +   +   R     LN  + AD R+   MLP+ DG+T+  +I
Sbjct:   84 LTAALAMGDEGRVVACDVSTDYTQHALKFWAKAGVDHKINLKIQPASKTLQELIDQGEEN--TYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGR-VADPNANVEPNLVAIR----ALNDKILADKRVTKTMLPIADGITLVTKI 229          
The following BLAST results are available for this feature:
BLAST of CF835275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
CMTD1_MOUSE4.096e-2037.50Catechol-O-methyltransferase domain-containing pro... [more]
CAMT2_DICDI5.349e-2037.25Probable caffeoyl-CoA O-methyltransferase 2 OS=Dic... [more]
CAMT1_DICDI5.349e-2037.25Probable caffeoyl-CoA O-methyltransferase 1 OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835275 ID=CF835275; Name=CF835275; organism=Citrus sinensis; type=EST; length=671bp
TTTTTTTTTTTTTTTTTCTTCCAACTGATTATTTTTAAACTACCCTTAGC
CAAGAGTCCATTTTGCATCGATAAAATAAAGTACAATAATTTGCATTATA
AAGAAAAATGCACAAGAGAGGGGAAAAAAATGGTAAAATCACATGTAGCA
TTATCTTCGAGGTACCGGTCATCGGCGGCGGACCCCCTCAAAGAATTGGT
TTAGGCATTTCACTTGATCCGACGGCAGATAGTGACTCCATCGCCAACGG
GGAGCATGCAAATTTCAATCCTGGGGTCAGCAGCAAGGGCCTTGTTGAGC
TCCAAGACAAAGTCTCGGTAATACCTAACGTACTTCCTAAGGGGAGCATC
AGGTGGTGCCACGACGGATCCGTTCCATAGGGTGTTGTCGTACCCGATCA
CCCCTCCAACCTTCACCAACTCAATCAACCTCTTGTGGTAGTTTAGGTAG
TTGTCCTTATCAGCGTCCACAAATATGAAGTCAAAGGACCCATGGTTCTT
CTCATCTTGGATCACCAGGTCAAGAACAGGCAGGGCAGGGCCTTCTCTGA
AGTCAATCTTGTGAGCAACACCAGCTTTTTGGATAACTGGCAGCCCCAAT
TCATAATTTTCTCTGTTGATGTCCATGGCCAAAATCTTGCCGTCATCAGG
AAGGGCAAGGGCAGTGGCCAA
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