CF835276

Overview
NameCF835276
Unique NameCF835276
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835276 vs. ExPASy Swiss-Prot
Match: MDMC_STRMY (O-methyltransferase mdmC OS=Streptomyces mycarofaciens GN=mdmC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.988e-29
Identity = 84/210 (40.00%), Postives = 118/210 (56.19%), Query Frame = 1
Query:  121 SDALYQYILETSVYPREPESMKELRELTAKHPWN-IMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAP-PDAPLRKYVRYYRDFVLELNKALAADPRIEICM 744
            S AL  Y    SV  RE   ++EL ++TA+ P    M    +E QFL +L++LV A+  +EIG +TGYS L  A ALP  G+I+  DI+ +   +G P  Q+AGV   ID R G A   L  L ++    G+FD +FVDADK  YL+Y+++ + LV+ GG++  DNTL+ G V  P  D P    VR        LN  L  D R++I +
Sbjct:    8 SPALLDYA--RSVALREDGLLRELHDMTAQLPGGRAMQIMPEEAQFLGLLIRLVGARRVLEIGTFTGYSTLCMARALPAGGRIVTCDISDKWPGIGAPFWQRAGVDGLIDLRIGDAARTLAEL-RERDGDGAFDLVFVDADKAGYLHYYEQALALVRPGGLVAIDNTLFFGRVADPAADDPDTVAVR-------TLNDLLRDDERVDIAL 207          
BLAST of CF835276 vs. ExPASy Swiss-Prot
Match: CAMT2_DICDI (Probable caffeoyl-CoA O-methyltransferase 2 OS=Dictyostelium discoideum GN=omt6 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.083e-26
Identity = 70/184 (38.04%), Postives = 112/184 (60.87%), Query Frame = 1
Query:  184 KELRELTAKH-PWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRI 732
            KEL + T ++   +IM T A++  F  +L++++NAK T++IGV+TG S L  ALA+ D+G+++A D++ E  +  L    KAGV HKI+ +  PA   L  LI D+    ++DF+F+DADK  Y  Y++  ++L++ GG+I  DN L +G  VA P+A +   +   R     LN  + AD R+
Sbjct:   36 KELIQFTKENIERHIMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTEYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGR-VADPNANVEPNLVAIR----ALNDKILADKRV 213          
BLAST of CF835276 vs. ExPASy Swiss-Prot
Match: CAMT1_DICDI (Probable caffeoyl-CoA O-methyltransferase 1 OS=Dictyostelium discoideum GN=omt5 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.640e-26
Identity = 69/184 (37.50%), Postives = 112/184 (60.87%), Query Frame = 1
Query:  184 KELRELTAKH-PWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRI 732
            KEL + T ++   +IM T A++  F  +L++++NAK T++IGV+TG S L  ALA+ D+G+++A D++ +  +  L    KAGV HKI+ +  PA   L  LI D+    ++DF+F+DADK  Y  Y++  ++L++ GG+I  DN L +G  VA P+A +   +   R     LN  + AD R+
Sbjct:   35 KELIQFTKENIERHIMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTDYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGR-VADPNANVEPNLVAIR----ALNDKILADKRV 212          
The following BLAST results are available for this feature:
BLAST of CF835276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
MDMC_STRMY9.988e-2940.00O-methyltransferase mdmC OS=Streptomyces mycarofac... [more]
CAMT2_DICDI2.083e-2638.04Probable caffeoyl-CoA O-methyltransferase 2 OS=Dic... [more]
CAMT1_DICDI4.640e-2637.50Probable caffeoyl-CoA O-methyltransferase 1 OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P07_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835276 ID=CF835276; Name=CF835276; organism=Citrus sinensis; type=EST; length=744bp
TTTAAAACTCCCAATTCCAACATCAAAAGAAAAGATTTGCGTCAATGGCG
TCCCACTGCAGAAGATCAACAAAACCAACAAGGCAGACACCAGGAAGTTG
GTCACAAGAGCCTGCTCCAATCCGATGCCCTCTACCAGTATATTCTTGAA
ACCAGTGTGTACCCAAGAGAGCCTGAATCAATGAAGGAGCTTAGAGAATT
GACTGCCAAACATCCATGGAACATTATGACAACGTCGGCAGACGAAGGGC
AGTTCTTGAACATGCTGTTGAAGCTGGTCAATGCAAAGAACACAATGGAG
ATTGGAGTCTACACAGGCTACTCTCTTTTGGCCACTGCCCTTGCCCTTCC
TGATGACGGCAAGATTTTGGCCATGGACATCAACAGAGAAAATTATGAAT
TGGGGCTGCCAGTTATCCAAAAAGCTGGTGTTGCTCACAAGATTGACTTC
AGAGAAGGCCCTGCCCTGCCTGTTCTTGACCTGCTGATCCAAGATGAGAA
GAACCATGGGTCCTTTGACTTCATATTTGTGGACGCTGATAAGGACAACT
ACCTAAACTACCACAAGAGGTTGATTGAGTTGGTGAAGGTTGGAGGGGTG
ATCGGGTACGACAACACCCTATGGAACGGATCCGTCGTGGCACCACCTGA
TGCTCCCCTTAGGAAGTACGTTAGGTATTACCGAGACTTCGTCTTGGAGC
TCAACAAGGCCCTTGCTGCTGACCCCAGGATTGAAATCTGCATG
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