CF835294
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.783e-27 Identity = 57/97 (58.76%), Postives = 77/97 (79.38%), Query Frame = 2 Query: 110 RIAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLL 400 ++A G+ G++ ++KA +AEF + L+FVFAG GS +A+ +LT+GGA PAGL++ ++AHA ALFV VSV ANISGGH+NPAVTFG VGGHIT+L Sbjct: 3 KLAFGSLGDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITIL 99
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 9.864e-27 Identity = 58/97 (59.79%), Postives = 77/97 (79.38%), Query Frame = 2 Query: 110 RIAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLL 400 ++A G+ ++ +LKA +AEF + L+FVFAG GS +A+S+LT GGA PAGL++ ++AHAFALFV VS+ ANISGGH+NPAVTFG VGGHIT+L Sbjct: 3 KLAFGSFRDSLSAASLKAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITIL 99
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.288e-26 Identity = 57/97 (58.76%), Postives = 76/97 (78.35%), Query Frame = 2 Query: 110 RIAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLL 400 ++A G+ G++ ++KA +AEF + L+FVFAG GS +AF +LT+GGA PAGL++ ++AHA ALFV VSV AN SGGH+NPAVTFG VGGHIT+L Sbjct: 3 KLAFGSVGDSFSVTSIKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVL 99
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.197e-26 Identity = 56/97 (57.73%), Postives = 76/97 (78.35%), Query Frame = 2 Query: 110 RIAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLL 400 +I +G+ G++ +LKA L+EF + L+FVFAG GS +AF+KLT GA PAGL++ ++AHAFALFV VS+ ANISGGH+NPAVT G +GG+ITL+ Sbjct: 3 KIEVGSVGDSFSVSSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLI 99
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.424e-25 Identity = 57/97 (58.76%), Postives = 75/97 (77.32%), Query Frame = 2 Query: 110 RIAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLL 400 RIA G+ G++ +LKA +AEF + L+FVFAG GS +A++KLT A PAGL++ ++AHAFALFV VS+ ANISGGH+NPAVT G VGG+IT+L Sbjct: 3 RIAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITIL 99
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 1.860e-25 Identity = 56/97 (57.73%), Postives = 75/97 (77.32%), Query Frame = 2 Query: 110 RIAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLL 400 +I IG+ G++ +LKA L+EF + L+FVFAG GS +AF+KLT A PAGL++ ++AHAFALFV VS+ ANISGGH+NPAVT G VGG+IT++ Sbjct: 3 KIEIGSVGDSFSVASLKAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVI 99
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.413e-25 Identity = 54/102 (52.94%), Postives = 73/102 (71.57%), Query Frame = 2 Query: 98 MPIYRIAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLR 403 M R + G EA+HPD+++A LAEF S IFVFAG+GSG+A K+ A + L++ +LAHAFALF AVS ++SGGHVNPAV+FGA +GG I+++R Sbjct: 1 MATRRYSFGRTDEATHPDSMRASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIR 102
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.413e-25 Identity = 56/99 (56.57%), Postives = 69/99 (69.70%), Query Frame = 2 Query: 122 GTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKL-----TDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLR 403 G EA+HPD+++A LAEF S +FVFA +GS ++ KL G +TP GLI +LAHAFALF AVS N+SGGHVNPAVTFGA VGG +T +R Sbjct: 12 GRADEATHPDSIRATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFALFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIR 110
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 5.413e-25 Identity = 56/96 (58.33%), Postives = 74/96 (77.08%), Query Frame = 2 Query: 113 IAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLL 400 IA G+ G++ +LKA +AEF + L+FVFAG GS +A++KLT A PAGL++ ++AHAFALFV VS+ ANISGGH+NPAVT G VGG+IT+L Sbjct: 4 IAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITIL 99
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.233e-25 Identity = 54/97 (55.67%), Postives = 75/97 (77.32%), Query Frame = 2 Query: 110 RIAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLL 400 +IA G+ G++ ++KA +AEF + L+FVFAG GS +A++KLT A PAGL++ ++AHAFALFV VS+ AN+SGGH+NPAVT G VGG+IT+L Sbjct: 3 KIAFGSIGDSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITIL 99 The following BLAST results are available for this feature:
BLAST of CF835294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835294 ID=CF835294; Name=CF835294; organism=Citrus sinensis; type=EST; length=403bpback to top |