CF835294
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.206e-24 Identity = 55/96 (57.29%), Postives = 71/96 (73.96%), Query Frame = 2 Query: 113 IAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLL 400 IA G ++ +LKA +AEF S L+FVFAG GS +A++KLT G PAGL++ ++ H F LFVAV++GANISGGHVNPAVTFG +GG IT+L Sbjct: 5 IAFGRFDDSFSAASLKAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITIL 100
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.582e-24 Identity = 54/99 (54.55%), Postives = 69/99 (69.70%), Query Frame = 2 Query: 122 GTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKL-----TDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLR 403 G EA+HPD+++A LAEF S +FVFAG+GS +A KL G +TP GL+ +LAHA ALF AVS N+SGGHVNPAVTF A +GG I+++R Sbjct: 12 GRADEATHPDSIRATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIR 110
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.816e-24 Identity = 53/101 (52.48%), Postives = 72/101 (71.29%), Query Frame = 2 Query: 101 PIYRIAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLR 403 P R +G +A+HPD ++A ++EF + IFVFA +GS ++ KL STP GL++ SLAHA AL VAV+V NISGGHVNPA+TFGA +GG ++L+R Sbjct: 8 PGRRFTVGRSEDATHPDTIRAAISEFLATAIFVFAAEGSILSLGKLYQD-MSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIR 107
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 3.879e-23 Identity = 53/96 (55.21%), Postives = 71/96 (73.96%), Query Frame = 2 Query: 113 IAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLL 400 +A G+ ++ +L+A LAEF S L+FVFAG GS +A++KLT A GL++ ++ H FALFVAV++GANISGGHVNPAVTFG VGG IT++ Sbjct: 4 VAFGSFDDSFSLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVI 99
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.641e-23 Identity = 52/101 (51.49%), Postives = 71/101 (70.30%), Query Frame = 2 Query: 101 PIYRIAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLR 403 P R +G +A+HPD ++A ++EF + IFVFA +GS ++ K+ ST GL++ +LAHA AL VAV+V NISGGHVNPAVTFGA VGG ++L+R Sbjct: 7 PGRRFTVGRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHD-MSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVR 106
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.601e-22 Identity = 49/100 (49.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 110 RIAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGA--STPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLR 403 R +G +A+HPD ++A ++EF + IFVFA +GS ++ K+ + ST GL++ +LAHA L VAV+V N+SGGHVNPAVTFGA VGG ++L+R Sbjct: 12 RFTVGRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVR 111
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.570e-19 Identity = 48/98 (48.98%), Postives = 63/98 (64.29%), Query Frame = 2 Query: 110 RIAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLR 403 ++A+G EA+ P L+A +AE +FVF+G GS MA +KL GG T GL + + AHA + V VS G ++SGGH+NPAVT G GGHITL R Sbjct: 3 KLALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKL-GGGGDTIMGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFR 99
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.757e-18 Identity = 47/98 (47.96%), Postives = 58/98 (59.18%), Query Frame = 2 Query: 110 RIAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLR 403 + A+G EAS ++A LAE +FVFAG GS MA KL GG T GL + +LAH + V VS G ++SGGH+NPAVT G G ITL R Sbjct: 3 KFALGHHREASDAGCVRAVLAELILTFLFVFAGVGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFR 100
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.093e-17 Identity = 46/98 (46.94%), Postives = 64/98 (65.31%), Query Frame = 2 Query: 110 RIAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLR 403 +I +G EA+ PD +KA + EF + +FVFAG GS MA L +T GL + ++AHAF + V +S G +ISGGH+NPAVT G +GGHI++ R Sbjct: 3 KIELGHHSEAAKPDCIKALIVEFITTFLFVFAGVGSAMATDSLV---GNTLVGLFAVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLLGGHISVFR 96
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 1.578e-16 Identity = 42/84 (50.00%), Postives = 56/84 (66.67%), Query Frame = 2 Query: 146 PDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITL 397 P AL+A AEFFS +FVF GS ++ LT S + L++ ++A AF LF AV + A++SGGHVNPAVTF +GGHIT+ Sbjct: 14 PPALRAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFGLFAAVFIAADVSGGHVNPAVTFAYAIGGHITV 97 The following BLAST results are available for this feature:
BLAST of CF835294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835294 ID=CF835294; Name=CF835294; organism=Citrus sinensis; type=EST; length=403bpback to top |