CF835305

Overview
NameCF835305
Unique NameCF835305
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length657
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM6_ARATH (Calmodulin-6 OS=Arabidopsis thaliana GN=CAM6 PE=1 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 3.418e-56
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL+DEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   41 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149          

HSP 2 Score: 67.781 bits (164), Expect = 5.713e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -1
Query:  331 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 561
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM_WHEAT (Calmodulin OS=Triticum aestivum PE=1 SV=3)

HSP 1 Score: 217.624 bits (553), Expect = 4.464e-56
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQ+GFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   41 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQDGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM3_PETHY (Calmodulin-related protein OS=Petunia hybrida GN=CAM53 PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 4.464e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = -1
Query:  334 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 657
            GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA
Sbjct:   41 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148          

HSP 2 Score: 67.781 bits (164), Expect = 5.713e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -1
Query:  331 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 561
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM_MAIZE (Calmodulin OS=Zea mays GN=CALM1 PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 5.830e-56
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNGTIDFPE LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   41 GQNPTEAELQDMINEVDADGNGTIDFPELLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM3_ORYSJ (Calmodulin-3 OS=Oryza sativa subsp. japonica GN=CAM3 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 7.614e-56
Identity = 107/109 (98.17%), Postives = 109/109 (100.00%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV+EMIREADVDGDGQINY+EFVKVMMAK
Sbjct:   41 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYDEFVKVMMAK 149          

HSP 2 Score: 67.3958 bits (163), Expect = 7.461e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -1
Query:  331 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 561
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM1_ARATH (Calmodulin-1/4 OS=Arabidopsis thaliana GN=CAM1 PE=1 SV=3)

HSP 1 Score: 216.468 bits (550), Expect = 9.944e-56
Identity = 106/109 (97.25%), Postives = 109/109 (100.00%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA+KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV+EMIREADVDGDGQINYEEFVK+MMAK
Sbjct:   41 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEEFVKIMMAK 149          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM_MALDO (Calmodulin OS=Malus domestica GN=CAM PE=3 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 1.696e-55
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNGTIDFPE LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   41 GQNPTEAELQDMINEVDADGNGTIDFPEPLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM_MOUSC (Calmodulin OS=Mougeotia scalaris PE=2 SV=3)

HSP 1 Score: 212.231 bits (539), Expect = 1.875e-54
Identity = 103/109 (94.50%), Postives = 108/109 (99.08%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF+VFDKDQNG+ISAA+ RHVMTNLGEKLTDEEVDEMIREADVDGDGQ+NYEEFVK+MMAK
Sbjct:   41 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGYISAADWRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVKMMMAK 149          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM_FAGSY (Calmodulin OS=Fagus sylvatica GN=CAMF1 PE=2 SV=3)

HSP 1 Score: 211.075 bits (536), Expect = 4.178e-54
Identity = 107/109 (98.17%), Postives = 107/109 (98.17%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVD DGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   41 GQNPTEAELQDMINEVDRDGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD-EVDEMIREADVDGDGQINYEEFVKVMMAK 148          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM_SOLLC (Calmodulin OS=Solanum lycopersicum GN=CALM1 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 1.588e-53
Identity = 101/109 (92.66%), Postives = 108/109 (99.08%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMI+EVDAD NGTIDFPEFLNLMARKMKDTDSEEELKEAF+VFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M+AK
Sbjct:   41 GQNPTEAELQDMISEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVRMMLAK 149          
The following BLAST results are available for this feature:
BLAST of CF835305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 390
Match NameE-valueIdentityDescription
CALM6_ARATH3.418e-5699.08Calmodulin-6 OS=Arabidopsis thaliana GN=CAM6 PE=1 ... [more]
CALM_WHEAT4.464e-5699.08Calmodulin OS=Triticum aestivum PE=1 SV=3[more]
CALM3_PETHY4.464e-56100.00Calmodulin-related protein OS=Petunia hybrida GN=C... [more]
CALM_MAIZE5.830e-5699.08Calmodulin OS=Zea mays GN=CALM1 PE=2 SV=2[more]
CALM3_ORYSJ7.614e-5698.17Calmodulin-3 OS=Oryza sativa subsp. japonica GN=CA... [more]
CALM1_ARATH9.944e-5697.25Calmodulin-1/4 OS=Arabidopsis thaliana GN=CAM1 PE=... [more]
CALM_MALDO1.696e-5599.08Calmodulin OS=Malus domestica GN=CAM PE=3 SV=2[more]
CALM_MOUSC1.875e-5494.50Calmodulin OS=Mougeotia scalaris PE=2 SV=3[more]
CALM_FAGSY4.178e-5498.17Calmodulin OS=Fagus sylvatica GN=CAMF1 PE=2 SV=3[more]
CALM_SOLLC1.588e-5392.66Calmodulin OS=Solanum lycopersicum GN=CALM1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835305 ID=CF835305; Name=CF835305; organism=Citrus sinensis; type=EST; length=657bp
TTTTTTTTTTTTTTTTAGAGGAAAAACATTAAGTCATCACATATCAATTT
CTTATCCACAAAATCTCGAAATAAGAAATAGGGCAGATCAACGAGTCACT
CATTTAACAGAAACAATGTTCACAGAAGAGCGGAAAAAAACTAAAACATT
AAAAAATTGCTCAAAAGATCCCGCCCCCAGATAAATTGAAGCAGGAGACA
ACATGCTTCCTTTAGCTTGACCTCAGAGTTATCAAATTAAAATTTATAAA
AAAGGAAACTAGGGAACCAATTATATTAATCAACCAATTTCTTCTTTTCC
CAGGAAGTTTTGGTTGGGTGGAGTCACTTACTTAGCCATCATAACCTTGA
CAAATTCCTCGTAATTTATCTGGCCATCACCATCGACATCAGCTTCCCTT
ATCATCTCATCGACTTCCTCATCAGTAAGCTTCTCCCCTAGGTTTGTCAT
CACATGGCGCAGCTCAGCAGCTGAGATGAAACCATTCTGATCCTTGTCGA
AAACCCGGAAGGCCTCTTTCAGCTCCTCCTCAGAGTCGGTATCCTTCATC
TTCCTGGCCATGAGGTTTAGGAATTCAGGAAAATCAATAGTTCCATTACC
ATCAGCATCCACTTCATTGATCATGTCCTGGAGCTCAGCCTCAGTGGGGT
TCTGACC
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