CF835305

Overview
NameCF835305
Unique NameCF835305
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length657
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CANB_KLULA (Calcineurin subunit B OS=Kluyveromyces lactis GN=CNB1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.503e-11
Identity = 37/98 (37.76%), Postives = 61/98 (62.24%), Query Frame = -1
Query:  346 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 624
            +I   D D +G +DF EF+  ++      +++ +L+ AFR++D D++G+IS  EL  V+     TNL ++   + VD  I E DVDGDG++++EEF K
Sbjct:   61 IIEVFDEDNSGDVDFQEFITSLSIFSGRGETDAKLRFAFRIYDIDKDGYISNGELFIVLKIMVGTNLEDEQLQQIVDRTIMENDVDGDGKLSFEEFKK 158          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: MLR_SPISA (Myosin regulatory light chain, smooth muscle OS=Spisula sachalinensis PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.963e-11
Identity = 36/109 (33.03%), Postives = 62/109 (56.88%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            G  P ++ LQ M+ E        ++F  FL+L + KM  TD EE L+ AF++FD D  G+I    ++ ++ N+G+  + +EV +  +EA + G G+++Y  FV  +  K
Sbjct:   53 GTAPQDSVLQAMVKEAPQ-----MNFTGFLSLFSEKMSGTDPEETLRNAFQMFDSDNTGYIPEEYMKDLLENMGDNFSKDEVRQTWKEAPIAG-GKVDYNAFVSKIKGK 155          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CANB1_NAEGR (Calcineurin subunit B OS=Naegleria gruberi GN=CNB1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.564e-11
Identity = 37/100 (37.00%), Postives = 62/100 (62.00%), Query Frame = -1
Query:  340 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 624
            +I+  D +G+G+++F EF+  ++      D + +L+ AF+V+D D +G+IS  EL  V+      NL +    + VD+ I EAD DGDG+I++EEF K +
Sbjct:   65 VISIFDENGDGSVNFKEFIAALSVFNAQGDKQRKLEFAFKVYDIDGDGYISNGELFTVLKMMVGNNLSDVQLQQIVDKTILEADEDGDGKISFEEFAKTL 164          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CML23_ORYSJ (Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica GN=CML23 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.374e-11
Identity = 37/116 (31.90%), Postives = 64/116 (55.17%), Query Frame = -1
Query:  334 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEE--------LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 657
            G++  + E+Q ++   D DG+G +D  EF+ L+     D D EE+        L+EAF +++ +  G I+   L+ +++ LG  L   E   MI   D++GDG + ++EF  +MMA
Sbjct:   36 GEDMPDEEVQALMALADTDGDGLLDEEEFVRLVTEMEADGDEEEDDDDETCRCLREAFAMYEMEGRGCITPLSLKLMLSKLGTHLDVAECQAMICRFDMNGDGVLTFDEFKTMMMA 151          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CANB2_HUMAN (Calcineurin subunit B type 2 OS=Homo sapiens GN=PPP3R2 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 4.374e-11
Identity = 39/100 (39.00%), Postives = 62/100 (62.00%), Query Frame = -1
Query:  340 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL-GEKLTD----EEVDEMIREADVDGDGQINYEEFVKVM 624
            +I+  D DG+G +DF EF+   ++     D E++L+ AF ++D D++G+IS  EL  V+  + G  LTD    + VD+ I   D DGDG+I++EEF  V+
Sbjct:   58 VIDVFDTDGDGEVDFKEFILGTSQFSVKGDEEQKLRFAFSIYDMDKDGYISNGELFQVLKMMVGNNLTDWQLQQLVDKTIIILDKDGDGKISFEEFSAVV 157          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CETNB_DICDI (Centrin-B OS=Dictyostelium discoideum GN=cenB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11
Identity = 35/100 (35.00%), Postives = 59/100 (59.00%), Query Frame = -1
Query:  331 QDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 630
            ++ +  +   G  +I F  F  L++  +   DS   L++AF++F KD +G I+  +L+ V  N+GE+ +D ++ +MI  AD DGDG IN  EF+ +M  K
Sbjct:   49 EETLELIKKKGQKSISFNSFFELVSPYIPKRDSMSTLEQAFKLFVKDGSG-ITFKDLKKVAINIGEECSDSDLYDMIEFADTDGDGVINKSEFISLMTTK 147          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CML19_ORYSJ (Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica GN=CML19 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.461e-11
Identity = 40/110 (36.36%), Postives = 65/110 (59.09%), Query Frame = -1
Query:  337 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 657
            G++ +  E + +++  D D +G +D  EF  L A +++  D EE    L EAFR+++ +  G I+ A L+ +++ LG     EE   MI   D+DGDG I++EEF K+MM
Sbjct:   37 GEDMSAEEAEALVSSADTDDDGLLDEEEFTKL-AVQLEMGDEEERCRGLMEAFRMYEMEGEGRITPASLKRMLSKLGSHQGIEECQTMICRFDLDGDGVISFEEF-KIMM 144          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CML28_ORYSJ (Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica GN=CML28 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11
Identity = 40/122 (32.79%), Postives = 67/122 (54.92%), Query Frame = -1
Query:  340 ELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---------------------DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVDEMIREADVDGDGQINYEEFVKVM 636
            EL   ++++DA+G+G +D  EF  L    + D                      D +E ++EAF VFD++ +GFI+  ELR V+++LG K   T ++   MI   D DGDG+++++EF ++M
Sbjct:   41 ELDATMDKIDANGDGCVDVEEFGLLYRSILGDDAAGRAPRTAAAAIGGEGGAPDDEDEGMREAFNVFDQNGDGFITVDELRSVLSSLGLKHGRTADDCRRMISMVDADGDGRVDFKEFKQMM 162          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CML17_ORYSJ (Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica GN=CML17 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11
Identity = 42/113 (37.17%), Postives = 63/113 (55.75%), Query Frame = -1
Query:  340 ELQDMINEVDADGNGTIDFPEFLNLMARKMK------------DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVDEMIREADVDGDGQINYEEFVKVM 636
            EL   I  +DA+G+G +D  EF  L    M+            D D E  ++EAF VFD++ +GFI+  EL  V+ +LG K   T E+   MI + D DGDG++++ EF ++M
Sbjct:   44 ELAATIARIDANGDGCVDMDEFTQLYETVMRVDGGGGGGGGACDVD-EASMREAFDVFDRNGDGFITVDELGAVLASLGIKQGRTAEDCGRMIGQVDRDGDGRVDFLEFKQMM 155          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CDPK3_PLAF7 (Calcium-dependent protein kinase 3 OS=Plasmodium falciparum (isolate 3D7) GN=CPK3 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11
Identity = 38/103 (36.89%), Postives = 66/103 (64.08%), Query Frame = -1
Query:  331 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVD---EMIREADVDGDGQINYEEFVKVMMAK 624
            +++++D+DG+G ID+ EF+   A   +   S++ +  AFRVFD D +G I+ AEL H++ N  +K  +T  +V+    MIR+ D + DG+I++ EF ++M  K
Sbjct:  461 LLDQIDSDGSGKIDYTEFI--AAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMKLK 561          
The following BLAST results are available for this feature:
BLAST of CF835305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 390
Match NameE-valueIdentityDescription
CANB_KLULA1.503e-1137.76Calcineurin subunit B OS=Kluyveromyces lactis GN=C... [more]
MLR_SPISA1.963e-1133.03Myosin regulatory light chain, smooth muscle OS=Sp... [more]
CANB1_NAEGR2.564e-1137.00Calcineurin subunit B OS=Naegleria gruberi GN=CNB1... [more]
CML23_ORYSJ4.374e-1131.90Putative calcium-binding protein CML23 OS=Oryza sa... [more]
CANB2_HUMAN4.374e-1139.00Calcineurin subunit B type 2 OS=Homo sapiens GN=PP... [more]
CETNB_DICDI5.713e-1135.00Centrin-B OS=Dictyostelium discoideum GN=cenB PE=3... [more]
CML19_ORYSJ7.461e-1136.36Putative calcium-binding protein CML19 OS=Oryza sa... [more]
CML28_ORYSJ9.744e-1132.79Probable calcium-binding protein CML28 OS=Oryza sa... [more]
CML17_ORYSJ9.744e-1137.17Probable calcium-binding protein CML17 OS=Oryza sa... [more]
CDPK3_PLAF79.744e-1136.89Calcium-dependent protein kinase 3 OS=Plasmodium f... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835305 ID=CF835305; Name=CF835305; organism=Citrus sinensis; type=EST; length=657bp
TTTTTTTTTTTTTTTTAGAGGAAAAACATTAAGTCATCACATATCAATTT
CTTATCCACAAAATCTCGAAATAAGAAATAGGGCAGATCAACGAGTCACT
CATTTAACAGAAACAATGTTCACAGAAGAGCGGAAAAAAACTAAAACATT
AAAAAATTGCTCAAAAGATCCCGCCCCCAGATAAATTGAAGCAGGAGACA
ACATGCTTCCTTTAGCTTGACCTCAGAGTTATCAAATTAAAATTTATAAA
AAAGGAAACTAGGGAACCAATTATATTAATCAACCAATTTCTTCTTTTCC
CAGGAAGTTTTGGTTGGGTGGAGTCACTTACTTAGCCATCATAACCTTGA
CAAATTCCTCGTAATTTATCTGGCCATCACCATCGACATCAGCTTCCCTT
ATCATCTCATCGACTTCCTCATCAGTAAGCTTCTCCCCTAGGTTTGTCAT
CACATGGCGCAGCTCAGCAGCTGAGATGAAACCATTCTGATCCTTGTCGA
AAACCCGGAAGGCCTCTTTCAGCTCCTCCTCAGAGTCGGTATCCTTCATC
TTCCTGGCCATGAGGTTTAGGAATTCAGGAAAATCAATAGTTCCATTACC
ATCAGCATCCACTTCATTGATCATGTCCTGGAGCTCAGCCTCAGTGGGGT
TCTGACC
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