CF835317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835317 vs. ExPASy Swiss-Prot
Match: CHSB_IPOCO (Chalcone synthase B (Fragment) OS=Ipomoea cordatotriloba GN=CHSB PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 7.632e-55 Identity = 108/199 (54.27%), Postives = 138/199 (69.35%), Query Frame = -2 Query: 252 MMYXQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEE 848 MMY QGC AG +LRLAKD+AENNKGARVLVVCSE+ FRGP+ D+L+ Q LF DP +E PL++L+S +QTI+P++D + H+RE+GLTFH K VP I++N+E L +AF P GISDWNSIFW+ HPGG AI+D V +A+R VLS YGN++SACVLFILDE+RKKS ++ Sbjct: 164 MMYQQGCNAGAAMLRLAKDVAENNKGARVLVVCSEVMLSVFRGPSLQQEDNLLAQCLFGDGSAALIVGTDPRPGLETPLFELISAAQTIIPNTDSHLKLHVREMGLTFHCSKAVPTFITQNVEDCLVKAFEPYGISDWNSIFWVLHPGGNAIVDGVEETLGLAPEKLRASRDVLSGYGNLTSACVLFILDEVRKKSKKD 362
BLAST of CF835317 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTR (Chalcone synthase B (Fragment) OS=Ipomoea triloba GN=CHSB PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 8.438e-54 Identity = 107/196 (54.59%), Postives = 138/196 (70.41%), Query Frame = -2 Query: 261 MMYXQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKS 848 MMY QGC AG +LRLAKDLAE+NKG R+LVVCSEIT FRGP+ D+L+ Q LF DP +E PL++LVS++QTI+P++D + LRE+GLTFH + VP ++++N+E L +AF P GISDWNSIFW+ HPGG AI+D+V +A+R VLSEYGN++SACVLFILDE+R KS Sbjct: 166 MMYQQGCNAGAAMLRLAKDLAESNKGGRILVVCSEITINIFRGPSLEQDDNLLAQCLFGDGSAAMIVGTDPRPDLETPLFELVSSAQTIVPNTDSHLKLTLREMGLTFHCSRAVPSVLAENVEDCLVKAFEPYGISDWNSIFWVFHPGGNAIVDRVEERLGLGAQRFRASRDVLSEYGNLTSACVLFILDEVRNKS 361
BLAST of CF835317 vs. ExPASy Swiss-Prot
Match: CHSC_IPOPU (Chalcone synthase C (Fragment) OS=Ipomoea purpurea GN=CHSC PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 3.001e-51 Identity = 104/187 (55.61%), Postives = 126/187 (67.38%), Query Frame = -2 Query: 288 MMYXQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLF 848 MMY QGC AG +LRLAKDLAENNKG RVLVVCSE+ FRGP+ D+L+ Q LF +P +E PL++LVS +QT +PD+D + LRE+GLTFH K VP LI++NIE L +AF P GISDWNSIFWI HPGG AILD V +A+R VLS+YGN++SACVLF Sbjct: 164 MMYQQGCNAGAVMLRLAKDLAENNKGGRVLVVCSEVMLSVFRGPSLQQEDNLLAQCLFGDGSAAVIVGTEPRPGLETPLFELVSAAQTTIPDTDSYLKLQLREMGLTFHCSKAVPSLITQNIEDCLVKAFEPFGISDWNSIFWILHPGGNAILDGVEEKLGLEPEKLRASRDVLSQYGNLTSACVLF 350
BLAST of CF835317 vs. ExPASy Swiss-Prot
Match: CHSA_IPONI (Chalcone synthase A (Fragment) OS=Ipomoea nil GN=CHSA PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.151e-49 Identity = 101/184 (54.89%), Postives = 123/184 (66.85%), Query Frame = -2 Query: 297 MMYXQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSAC 848 MMY QGC AG +LRLAKDLAENNKG RVLVVCSE+ FRGP+ D L+ Q LF +P +E PL++LVS +QT +PD+D + HLRE+GLTFH K VP LI++N+E L +AF P GISDWNSIFWI HPGG AILD+V +A+R VLSE GN++SAC Sbjct: 161 MMYQQGCNAGAAMLRLAKDLAENNKGGRVLVVCSEVMLNVFRGPSLEQEDYLLAQCLFGDGSAAVIVGTEPRPGLETPLFELVSAAQTTIPDTDSHLKLHLREMGLTFHCSKAVPSLITQNVEDYLVKAFEPFGISDWNSIFWILHPGGIAILDRVEEKLGLEPEKLRASRDVLSESGNLTSAC 344
BLAST of CF835317 vs. ExPASy Swiss-Prot
Match: CHSY_FRAAN (Chalcone synthase RJ5 (Fragment) OS=Fragaria ananassa PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.935e-36 Identity = 72/96 (75.00%), Postives = 79/96 (82.29%), Query Frame = -2 Query: 159 ISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 446 I+DWNS+FWIAHPGGPAILDQV +ATR +LSEYGNMSSACVLFILDE+R+KSA TTGEGL+WGVLFGFGPGLTVETVVLHSV Sbjct: 2 ITDWNSLFWIAHPGGPAILDQVEAKLALKPEKLEATRHILSEYGNMSSACVLFILDEVRRKSAANGHKTTGEGLEWGVLFGFGPGLTVETVVLHSV 97
BLAST of CF835317 vs. ExPASy Swiss-Prot
Match: PKS1_DICDI (Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.536e-14 Identity = 62/230 (26.96%), Postives = 99/230 (43.04%), Query Frame = -2 Query: 159 GCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIF-----WIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 833 GC AG + LR A LA+ + R+LVVC+E+ ++ F D +V ++F +P E PLY+++ + P+++ A+ L + G L +P +I IE + + +I ++ H GG +IL + K T V YGNMSSA V+F++D RK + + + FGPGL E L +V Sbjct: 2929 GCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHFSNTDGG--DQMVASSIFADGSAAYIIGCNPRIE-ETPLYEVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFLIHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSKSLPT---------YSISLAFGPGLAFEGCFLKNV 3146
BLAST of CF835317 vs. ExPASy Swiss-Prot
Match: PKS37_DICDI (Probable polyketide synthase 37 OS=Dictyostelium discoideum GN=stlB PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.990e-12 Identity = 52/226 (23.01%), Postives = 98/226 (43.36%), Query Frame = -2 Query: 171 MMYXQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVV 848 M+ GC A +R A A+ G VLVV E +A + D+ D L+ QA+F P +S+ L +++ ++PDS A++ + G+ L ++P I+++I +++ + + F+ HPGG I+ V + +V+ YGNM ++L + K+ + G ++G+ F PG ++E ++ Sbjct: 2741 MINFMGCGAAVNSMRAATAYAKLKPGTFVLVVAVEASATCMKFNFDSRSD-LLSQAIFTDGCVATLVTCQPKSSLVGKL-EIIDDLSYLMPDSRDALNLFIGPTGIDLDLRPELPIAINRHINSAITSWLKKNSLQKSDIEFFATHPGGAKIISAVHEGLGLSPEDLSDSYEVMKRYGNMIGVSTYYVLRRILDKN-QTLLQEGSLGYNYGMAMAFSPGASIEAIL 2963 The following BLAST results are available for this feature:
BLAST of CF835317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835317 ID=CF835317; Name=CF835317; organism=Citrus sinensis; type=EST; length=849bpback to top |