CF835329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2C_BOVIN (Myocyte-specific enhancer factor 2C OS=Bos taurus GN=MEF2C PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.633e-15 Identity = 39/74 (52.70%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI +I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF++T KLF+Y+S+ M ++L K+ +++ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYNE 74
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2B_MOUSE (Myocyte-specific enhancer factor 2B OS=Mus musculus GN=Mef2b PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.051e-15 Identity = 40/74 (54.05%), Postives = 56/74 (75.68%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI +I + RQVTF+KR+ G+ KKA ELSVLCD D+ALIIF++ +LF+Y+SS M +L K+ +S+ Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCDIALIIFNSAQRLFQYASSDMDRVLLKYTEYSE 74
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2D_XENLA (Myocyte-specific enhancer factor 2D homolog OS=Xenopus laevis GN=mef2d PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.032e-14 Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI++I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+ + KLF+Y+S+ M ++L K+ +++ Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNE 74
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2D_RAT (Myocyte-specific enhancer factor 2D OS=Rattus norvegicus GN=Mef2d PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.032e-14 Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI++I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+ + KLF+Y+S+ M ++L K+ +++ Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNE 74
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2D_MOUSE (Myocyte-specific enhancer factor 2D OS=Mus musculus GN=Mef2d PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.032e-14 Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI++I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+ + KLF+Y+S+ M ++L K+ +++ Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNE 74
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2D_HUMAN (Myocyte-specific enhancer factor 2D OS=Homo sapiens GN=MEF2D PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.032e-14 Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI++I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+ + KLF+Y+S+ M ++L K+ +++ Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNE 74
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.032e-14 Identity = 54/144 (37.50%), Postives = 86/144 (59.72%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSS---SSMKEILEKHR--VHSKNLERVDQP-SVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRV 613 M R + +IK+I+N T RQ TF KRR G+FKKA EL+VLCDAD+ L++FSA+GKL+ + S S++E +E++ H+K + Q EL+ + + +L K+ LR M ++ ++ L+ LE +LE + +V Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYEATTHTKVWADIRQERRAELEKV-GSMCDLLEKQ-------LRFMTVDDGEEYTVPSLEALEHNLEAAMRKV 136
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.032e-14 Identity = 47/150 (31.33%), Postives = 84/150 (56.00%), Query Frame = 2 Query: 278 GIFKKAEELSVLCDADVALIIFSATGKLFEYSSS--SMKEILEKHRVHSKNLERV-DQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAE 718 G+ KKA EL++LCDA + +IIFS++GK+FE+SS SM+EI+++++ S N V D V ++ N E + +R GE++ L++ E+ +LE+ LE+ + +V + L+R+ +L E+N L + + + Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQKLSGNCAPVYDNQQVYCEITRMKN------EIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQNRELYRVIQD 145
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2A_XENLA (Myocyte-specific enhancer factor 2A homolog OS=Xenopus laevis GN=mef2a PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14 Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI +I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+++ KLF+Y+S+ M ++L K+ +++ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNE 74
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2A_RAT (Myocyte-specific enhancer factor 2A OS=Rattus norvegicus GN=Mef2a PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14 Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI +I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+++ KLF+Y+S+ M ++L K+ +++ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNE 74 The following BLAST results are available for this feature:
BLAST of CF835329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835329 ID=CF835329; Name=CF835329; organism=Citrus sinensis; type=EST; length=732bpback to top |