CF835329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2A_PONAB (Myocyte-specific enhancer factor 2A OS=Pongo abelii GN=MEF2A PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14 Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI +I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+++ KLF+Y+S+ M ++L K+ +++ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNE 74
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2A_PIG (Myocyte-specific enhancer factor 2A OS=Sus scrofa GN=MEF2A PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14 Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI +I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+++ KLF+Y+S+ M ++L K+ +++ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNE 74
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2A_MOUSE (Myocyte-specific enhancer factor 2A OS=Mus musculus GN=Mef2a PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14 Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI +I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+++ KLF+Y+S+ M ++L K+ +++ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNE 74
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2A_HUMAN (Myocyte-specific enhancer factor 2A OS=Homo sapiens GN=MEF2A PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14 Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI +I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+++ KLF+Y+S+ M ++L K+ +++ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNE 74
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2A_CHICK (Myocyte-specific enhancer factor 2A OS=Gallus gallus GN=MEF2A PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14 Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI +I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+++ KLF+Y+S+ M ++L K+ +++ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNE 74
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2A_BOVIN (Myocyte-specific enhancer factor 2A OS=Bos taurus GN=MEF2A PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14 Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI +I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF+++ KLF+Y+S+ M ++L K+ +++ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNE 74
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2B_HUMAN (Myocyte-specific enhancer factor 2B OS=Homo sapiens GN=MEF2B PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.299e-14 Identity = 38/74 (51.35%), Postives = 56/74 (75.68%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI +I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF++ +LF+Y+S+ M +L K+ +S+ Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYASTDMDRVLLKYTEYSE 74
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana GN=AGL61 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.737e-14 Identity = 42/133 (31.58%), Postives = 76/133 (57.14%), Query Frame = 2 Query: 179 LASKGKEMAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQK 577 ++ K + + R+KI + KI + RQVTFSKRR G+FKKA EL LC A++ +I+FS K F + S++ +L+++ V N+ ++ + +M + +H+L ++ E+ G ++EE++K Sbjct: 55 MSKKKESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLDRY-VSRNNMSLAQSQQLQGSPAASCELNM------QLTHILSEVEEEKKKGQAMEEMRK 180
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: SMP1_YEAST (Transcription factor SMP1 OS=Saccharomyces cerevisiae GN=SMP1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.811e-12 Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSKNLERVDQPS 448 M R KI+I+ I + R VTF KR+ G+FKKA ELSVLC D+A+II + +EYSS M +L H+ ++ + +PS Sbjct: 1 MGRRKIEIEPIKDDRNRTVTFIKRKAGLFKKAHELSVLCQVDIAVIILGSNNTFYEYSSVDMSNLLNVHQNNTDLPHNIIEPS 83
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: AGL62_ARATH (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana GN=AGL62 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.178e-12 Identity = 46/155 (29.68%), Postives = 81/155 (52.26%), Query Frame = 2 Query: 194 KEMAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEK---------HRVHSKNLERVDQPSVELQLLENNNYSML------------FKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLE 595 K R+KI++ K+ N + QVTFSKRR G+FKKA EL LC A+VA+++FS K+F + ++ ++++ H+ ++ L + S+ +Q L N+ +L K+ EK+ L + + L+L +L+ + +LE Sbjct: 4 KSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSI-VQDLNNHLTQVLSQLETEKKKYDELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLE 157 The following BLAST results are available for this feature:
BLAST of CF835329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835329 ID=CF835329; Name=CF835329; organism=Citrus sinensis; type=EST; length=732bpback to top |