CF835329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.877e-24 Identity = 67/176 (38.07%), Postives = 105/176 (59.66%), Query Frame = 2 Query: 194 KEMAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKH-RVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAE 718 ++ R KI+IK+I+N T RQVTF KRR G+ KKA ELSVLCDA+VALI+FS+ G+L+EYS++S+K +E++ + S N + Q + + + L ++ + RQ+ GE I +S +EL+ LE LE + R+ + +Q+R L +N+ LR ++AE Sbjct: 15 RKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQES-AKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAE 189
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.451e-24 Identity = 70/176 (39.77%), Postives = 102/176 (57.95%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEY-SSSSMKEILEKHRVHS-KNLERVDQPSVELQLLENNNYSMLFKEAAEK-SHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAE 718 M R ++++K+I+N RQVTF+KRR G+ KKA ELSVLCDA+VALIIFS GKL+E+ S+ SM + LEK++ S E Q QL + N + K E R + GE++ L ++EL+ LE+ L+ L V ELQR+ +++ E N LR+++ E Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEE 176
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.451e-24 Identity = 70/176 (39.77%), Postives = 102/176 (57.95%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEY-SSSSMKEILEKHRVHS-KNLERVDQPSVELQLLENNNYSMLFKEAAEK-SHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAE 718 M R ++++K+I+N RQVTF+KRR G+ KKA ELSVLCDA+VALIIFS GKL+E+ S+ SM + LEK++ S E Q QL + N + K E R + GE++ L ++EL+ LE+ L+ L V ELQR+ +++ E N LR+++ E Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEE 176
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.451e-24 Identity = 66/172 (38.37%), Postives = 105/172 (61.05%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFK-EAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQV 712 M R ++++K+I+N RQVTFSKRR G+ KKA ELSVLCDA+VALIIFS+ GKL+E+ S+ + + LE+++ N + + E Q + + K EA +++ R + GE++ LS++ELQ+LE+ LE L + EL+R+ + L E N +L+ ++ Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQ--RHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKL 170
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.201e-24 Identity = 68/177 (38.42%), Postives = 99/177 (55.93%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSS-MKEILEKHRVHS---KNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAE 718 M R ++Q+K+I+N RQVTFSKRR G+ KKA E+SVLCDA+V LI+FS GKLFEY++ S M+ +LE++ +S K L D S LEN + L GE++ L+++ELQ LE L L + + LQ++ + L E+N +L ++V E Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYERYSFAEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKL---YVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKE 174
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.201e-24 Identity = 70/172 (40.70%), Postives = 107/172 (62.21%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEY-SSSSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFK-EAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQ 709 M R K ++K+I+NAT+RQVTFSKRR G+ KKA ELSVLCDA+VALIIFS GKL+E+ SSSS+ + +E+++ ++L + + Q ++ Y + K E E S R+M GE + S+EELQ+LE L+ L ++ +L+ + + L+ EN+ L ++ Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPKTVERYQKRIQDLGSNHKRNDNSQQSKDETYGLARKIEHLEIS--TRKMMGEGLDASSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEK 170
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.181e-24 Identity = 63/174 (36.21%), Postives = 104/174 (59.77%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKH-RVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAE 718 M R KI+IK+I+N T RQVTF KRR G+ KKA ELSVLCDA+VALI+FS+ G+L+EY+++S+K +E++ + +S V Q + + + + ++ ++ R + G+ I+ +SL +L+++E LE G+ ++ +Q+R L +N LR +V E Sbjct: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKSTVERYKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNANSRTIVGDSINTMSLRDLKQVENRLEKGIAKIRARKNELLYAEVEYMQKREVELQNDNMYLRSKVVE 174
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 4.181e-24 Identity = 68/177 (38.42%), Postives = 103/177 (58.19%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEY-SSSSMKEILEKHRVHSKNLERVDQPSVE-LQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAEVS 724 M R ++++K+I+N RQVTF+KRR G+ KKA ELSVLCDA+VALIIFS GKL+E+ SSSSM + LE+++ + + + E L++ Y L R + GE++ L+ +EL+ LER L++ L ++ +LQR+ L E N L+Q++ E S Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPETNISTREALEISSQQEYLKLKARYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLMEGS 177
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.131e-24 Identity = 66/177 (37.29%), Postives = 104/177 (58.76%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHR---VHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAEV 721 M R KI+IK+I+N+T RQVTF KRR G+ KKA ELSVLCDA+VALI+FS G+L+EY++++++ +E+++ S N V + + E+ + L ++ + R + G+ + LS++EL+++E LE + R+ Q+R L EN LR +VAEV Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNNIRSTIERYKKACSDSTNTSTVQEINAAYYQQES---AKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNENIYLRTKVAEV 174
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 9.314e-24 Identity = 68/180 (37.78%), Postives = 108/180 (60.00%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS--SMKEILEK---HRVHSKNLERVDQ-PSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAEV 721 M R K+Q+++I+N +RQVTFSKRR G+ KKA E++VLCD DVA I+FSA G LF Y+SS +M+ ILEK H + S+ +++ P +E + ++ EA +KS R + G+E+ L+L+++Q+LE ++ L + R+ KLLME+N L +++ E+ Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQ--RNLMGQELDSLTLQDIQQLENQIDTSLNNIR--------------SRKEKLLMEKNTILEKKITEL 164 The following BLAST results are available for this feature:
BLAST of CF835329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835329 ID=CF835329; Name=CF835329; organism=Citrus sinensis; type=EST; length=732bpback to top |