CF835329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.756e-22 Identity = 67/180 (37.22%), Postives = 102/180 (56.67%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEY-SSSSMKEILEKHRVHSKNLERVDQPSVE----LQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAEVS 724 M R ++++K+I+ RQVTF+KRR G+ KKA ELSVLCDA+VALIIFS GKL+E+ SSSSM + LE+++ K +P++ L++ Y L R + GE++ L+ +EL+ LER L++ L ++ + QR+ L E N L+Q++ E S Sbjct: 1 MGRGRVELKRIEGKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQ---KCNYGAPEPNISTREALEISSQQEYLKLKGRYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQRLMEGS 177
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.913e-22 Identity = 62/171 (36.26%), Postives = 97/171 (56.73%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS--SMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQ 706 M R KI++K+I+N T+RQVTFSKRR G+ KK ELSVLCDA + LIIFS+ GKLFEY S SM +I+ ++ + V+ V+L + + + ++ L++ +G+++ EEL +LE+ LE L ++ L++ K+L +EN + Q Sbjct: 4 MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTTGASLPVEDNRVQLY----DEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEKENHDMYQ 170
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.139e-21 Identity = 62/178 (34.83%), Postives = 109/178 (61.24%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEK-HRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAEVSNA 730 M R KI+IK+I+N++ RQVT+SKRR GI KKA+E+SVLCDA V++IIF+++GK+ E+SS+S+ +IL++ H++ + L +++ N + + K+ LR ++GE+I L+ EL LE +L+ GL + ++++ + + EE ++L Q+ ++ A Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVDILDQYHKLTGRRLWDAKHENLD------NEINKVKKDNDNMQIELRHLKGEDITSLNHRELMMLEDALDNGLTSI----RNKQNDLLRMMRKKTQSMEEEQDQLNWQLRQLEIA 168
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.139e-21 Identity = 63/178 (35.39%), Postives = 109/178 (61.24%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEK-HRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAEVSNA 730 M R KI+IK+I+N++ RQVT+SKRR GI KKA+E+SVLCDA V++IIF+++GK+ E+SS+S+ +IL++ H++ + L +++ N + + K+ LR ++GE+I L+ EL LE +LE GL + ++++ + + EE ++L Q+ ++ A Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVDILDQYHKLTGRRLLDAKHENLD------NEINKVKKDNDNMQIELRHLKGEDITSLNHRELMILEDALENGLTSI----RNKQNEVLRMMRKKTQSMEEEQDQLNCQLRQLEIA 168
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21 Identity = 62/173 (35.84%), Postives = 104/173 (60.12%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSS-SSMKEILEKH-RVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQV 712 M R+K++IK+I+N ++RQVTFSKRR G+ +KA +LSVLCDA VAL++ SA+GKL+ +SS ++ +IL+++ + H+ +L+ +D S L ++Y +L E + ++ G + +S++ L +LE LE L L+ + K+L EEN+ L Q+ Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQHADDLKALDHQSKALNY--GSHYELL--ELVDS-----KLVGSNVKNVSIDALVQLEEHLETALSVTRAKKTELMLKLVENLKEKEKMLKEENQVLASQM 164
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.259e-20 Identity = 65/176 (36.93%), Postives = 102/176 (57.95%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSS--MKEILEKHRV---HSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQV 712 M R KI+IK+I+NAT RQVT+SKRR GI KKA EL+VLCDA VA+I+FS+TGK E+ S S +K I ++++ S +E+ + L L++ N ++ + +RQ GE++ GL +EL+ LE++++ L V +++ K E E L+Q++ Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQAIGTSLWIEQYENMQRTLSHLKDINRNLRTE--------IRQRMGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYKKKVKHSYEAYETLQQEL 168
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.259e-20 Identity = 64/183 (34.97%), Postives = 102/183 (55.74%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHR-------VHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAEVSN 727 M R ++++K+I+N RQVTFSKRR G+ KKA ELSVLCDA+VALIIFS+ GKL+E+ S ++ +E++ ++K E E+ L++ S++ R + GE++ + ++ELQ LER LE L QR+ +++MEE E LR++ ++ + Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVGIESTIERYNRCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLV--------RTNRNLLGEDLGEMGVKELQALERQLEAALTATR--------------QRKTQVMMEEMEDLRKKERQLGD 161
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.644e-20 Identity = 68/187 (36.36%), Postives = 108/187 (57.75%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMK--EILEKH-RVHSKNL--ERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERL-----RQQVAEVSNA 730 M R KI+IK+I+NA R VTFSKRR G+ KKA+E++VLCDA VALIIF++ GK+ +Y SM +L+++ ++ K L + + S E+ ++ N S+ + LR ++GE+I L+L+ L +E ++E GL +V +R K++ EE +L +Q++A SNA Sbjct: 1 MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGKKLWDAKHENLSNEIDRIKKENDSLQLE--------LRHLKGEDIQSLNLKNLMAVEHAIEHGLDKVRDHQMEILI----SKRRNEKMMAEEQRQLTFQLQQQEMAIASNA 175
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 1.644e-20 Identity = 67/189 (35.45%), Postives = 104/189 (55.03%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSS-------MKEILEKHRVHSKNL---ERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENE----RLRQQVAEVS 724 M R KI+IK+I+N+T RQVTFSKRR GI KKA E+ VLCDA+V ++IFS+ GKL +Y + + ILEK++ +S + E+ S E+ ++ N +M + LR M+GE+++ L +EL +E +L G + +R K+L +E++ R+ QQ E+S Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIE--------LRHMKGEDLNSLQPKELIAIEEALNNGQANLRDKMMDHWRMH----KRNEKMLEDEHKMLAFRVHQQEVELS 177
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.147e-20 Identity = 62/176 (35.23%), Postives = 99/176 (56.25%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS--SMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSH-------LLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERL 700 M R KI++K+I+N T+RQVTFSKRR G+ KK ELSVLCDA + LI+FS GKL EY + SMK+I++++ V +K + P +E + + + + KE L++ +G+++ + EEL +LE+ L+ L +V L+R +L +EN+ + Sbjct: 1 MGRGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRY-VKAKGI----LPEMENRAGPHADNDQVIKELTRMKEETLNLQLNLQRYKGDDLSTVRFEELTELEKLLDQSLNKVRARKLELLHEQMENLKRTEFMLEKENQEM 171 The following BLAST results are available for this feature:
BLAST of CF835329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835329 ID=CF835329; Name=CF835329; organism=Citrus sinensis; type=EST; length=732bpback to top |