CF835329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18 Identity = 62/181 (34.25%), Postives = 105/181 (58.01%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS-SMKEILEKHRVHSKNL------ERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIH-GLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAE 718 MAR K+Q+++I+N RQVTF KRR G+ KKA ELS+LC+AD+ +IIFSA GKL++ +++ +M+E++E+++ S +R+D P E +L+ ++L K LR + G + +++EEL LER LE+ + + L+ + +L NE L++++ E Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQANACGDQRMD-PKQEAMVLK-QEINLLQKG-------LRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVE 172
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.974e-18 Identity = 53/132 (40.15%), Postives = 83/132 (62.88%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLE 595 M R K++I+KI+N T RQVTFSKRR GI KKA+EL+VLCDA V+L++ S+T KL Y S + L+K + +E VD + + ++ + +L + + + R+M G ++ GL+L EL L++ +E Sbjct: 1 MGRGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSPGVS--LKKMYDEYQKIEGVDLWRKQWERMQEQHRKVLELNSLLRREISRRM-GGDLEGLTLVELSALQQEME 129
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17 Identity = 60/185 (32.43%), Postives = 98/185 (52.97%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSS-SSMKEILEKH-------RVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAEVSNA 730 MAR KIQ+K+I+N RQVTF KRR G+ KKA+ELSVLCDA++ ++IFS GKLFE ++ +M+ +++K+ R S + L + ++L +E + M G ++LEEL LE+ LE + ++ L+ + +L N+ L +++ E +N+ Sbjct: 1 MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQKGISYMFGGGDGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQEIQSLRNKEGVLKNTNKYLLEKIEENNNS 185
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.950e-17 Identity = 56/143 (39.16%), Postives = 87/143 (60.84%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSS--SSMKEILEKHR------VHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGL 604 MAR KIQIK+I+N T RQVT+SKRR G+FKKA ELSVLCDA V++I+ S+T KL EY S ++ K++ ++++ + S + E++ + +L + N L +E +RQ GE ++ L E++ L ++ L Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKAVGVDLWSSHYEKMQEHLKKLNEVNRN----LRRE-------IRQRMGESLNDLGYEQIVNLIEDMDNSL 132
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2_DROME (Myocyte-specific enhancer factor 2 OS=Drosophila melanogaster GN=Mef2 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.219e-15 Identity = 49/136 (36.03%), Postives = 80/136 (58.82%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLG 607 M R+KIQI +I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIFS++ KL++Y+S+ M +L K+ +++ E + ++ + EN N M ++ R E + EE Q + + ++ +G Sbjct: 1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKYTEYNEPHESLTNKNIIEK--ENKNGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAIG 134
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: SRFC_DICDI (Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15 Identity = 42/105 (40.00%), Postives = 64/105 (60.95%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKS 514 M R KI I+KI N RQ TF+KR+ G+ KKA ELS+LCD ++A+I+FS+ KLF+YSS M ++L ++ ++ N + L N +Y+ +F K+ Sbjct: 3 MGRNKITIEKISNERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFSSNNKLFQYSSRDMDKLLIRYTDNTDNTRK---------NLTNQDYNRVFGNKKSKN 98
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2C_PONAB (Myocyte-specific enhancer factor 2C OS=Pongo abelii GN=MEF2C PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.633e-15 Identity = 39/74 (52.70%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI +I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF++T KLF+Y+S+ M ++L K+ +++ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYNE 74
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2C_PIG (Myocyte-specific enhancer factor 2C OS=Sus scrofa GN=MEF2C PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.633e-15 Identity = 39/74 (52.70%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI +I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF++T KLF+Y+S+ M ++L K+ +++ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYNE 74
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2C_MOUSE (Myocyte-specific enhancer factor 2C OS=Mus musculus GN=Mef2c PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.633e-15 Identity = 39/74 (52.70%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI +I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF++T KLF+Y+S+ M ++L K+ +++ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYNE 74
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MEF2C_HUMAN (Myocyte-specific enhancer factor 2C OS=Homo sapiens GN=MEF2C PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.633e-15 Identity = 39/74 (52.70%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSK 421 M R+KIQI +I + RQVTF+KR+ G+ KKA ELSVLCD ++ALIIF++T KLF+Y+S+ M ++L K+ +++ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYNE 74 The following BLAST results are available for this feature:
BLAST of CF835329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835329 ID=CF835329; Name=CF835329; organism=Citrus sinensis; type=EST; length=732bpback to top |