CF835363

Overview
NameCF835363
Unique NameCF835363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:43..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.563e-27
Identity = 75/203 (36.95%), Postives = 100/203 (49.26%), Query Frame = 3
Query:  141 TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 734
            + NDL   E    LF+    K NK Y + +E  +RF IFK NL+      K + S   G+  F+D++  EF+  Y G         +     +L   D  +P   DWR+KGAV PVK+QGSCGSCW+FS    +EG   + TG L   SEQ+L+DCD             GCNGG   SA +   +  G+     YPY G  R
Sbjct:   34 SQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR---------SYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQR 226          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.563e-27
Identity = 57/104 (54.81%), Postives = 69/104 (66.35%), Query Frame = 3
Query:  420 NDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            +DLP   DWRE GAV PVK+QG CGSCW+FST  A+EG N + TG L+SLSEQQLVDC          + + GC GG MN AF++ +  GG+  EE YPY G D
Sbjct:    1 DDLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCT---------TANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQD 95          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.265e-27
Identity = 56/100 (56.00%), Postives = 69/100 (69.00%), Query Frame = 3
Query:  420 NDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 719
            + LP   DWREKG +  VKDQGSCGSCW+FS   A+E  N + TG L+SLSEQ+LVDCD         S + GC+GGLM+ AFE+ +K GG+  EEDYPY
Sbjct:   16 DSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDR--------SYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPY 107          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.049e-25
Identity = 71/193 (36.79%), Postives = 101/193 (52.33%), Query Frame = 3
Query:  183 FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP----SATHGITQFSDLTPAEFRRTYLGLRRKLR------LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            +K+ +NK Y   ++  HR  I++ N++    H         + T G+ QF+D+T  EF+  YL    +        +P +A+   +      P   DWRE G V  VKDQG+CGSCW+FSTTG +EG         +S SEQQLVDC            ++GC+GGLM +A++Y LK  GL  E  YPYT  +
Sbjct:   24 WKRMYNKEYNGADDQ-HRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSHGVPYEANNRAV------PDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWG-------NNGCSGGLMENAYQY-LKQFGLETESSYPYTAVE 201          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.049e-25
Identity = 58/102 (56.86%), Postives = 67/102 (65.69%), Query Frame = 3
Query:  426 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            +P   DW +KG V PVK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVD             + GCNGGLM++AF+Y  + GGL  EE YPY  TD
Sbjct:    1 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRP-------QGNQGCNGGLMDNAFQYIKENGGLDSEESYPYEATD 95          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.370e-25
Identity = 71/187 (37.97%), Postives = 94/187 (50.27%), Query Frame = 3
Query:  183 FKKKFNKAYASQEEHDHRFTIFKANLRRAARH----QKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            FKK   + Y S  E   RF IF+  LR+ A H    +  + +    I +FSD+T  EFR   L      R   +  +   L     P   DWR KG V PV++QG CGSCW+ ST  A+E  + + +G  V LS QQLVDC            + GCNGG   + FEY +K  GL  + DYPY+G +
Sbjct:   26 FKKTHARTYKSLREEKLRFNIFQDTLRQIAEHNVKYENGESTYYLAINKFSDITDEEFR-DMLMKNEASRPNLEGLEVADLTVGAAPESIDWRSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSYG-------NHGCNGGFAVNGFEY-VKDNGLESDADYPYSGKE 203          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.052e-25
Identity = 71/191 (37.17%), Postives = 96/191 (50.26%), Query Frame = 3
Query:  174 FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            + L+KK + K Y S+ +   R  I++ NL+  + H        H     +    D+T  E  +   GL+      +  D   I       P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E D         GC GG M +AF+Y  K  G+  E+ YPY G D
Sbjct:   26 WELWKKTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPASRSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQD 207          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.986e-25
Identity = 72/194 (37.11%), Postives = 100/194 (51.55%), Query Frame = 3
Query:  174 FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND----LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            + L+KK   K Y S+ +   R  I++ NL++ + H        H     +    D+T  E  +   GLR     P  +     L T +    +P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E         + GC GG M +AF+Y  + GG+  E+ YPY G D
Sbjct:   26 WELWKKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQKMTGLRVP---PSRSFSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVSE---------NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQD 207          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 3.986e-25
Identity = 72/194 (37.11%), Postives = 100/194 (51.55%), Query Frame = 3
Query:  174 FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND----LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            + L+KK   K Y S+ +   R  I++ NL++ + H        H     +    D+T  E  +   GLR     P  +     L T +    +P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E         + GC GG M +AF+Y  + GG+  E+ YPY G D
Sbjct:   26 WELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIP---PSRSYSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTE---------NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQD 207          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.986e-25
Identity = 71/192 (36.98%), Postives = 97/192 (50.52%), Query Frame = 3
Query:  171 HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            H+ L+KK   K Y ++ +   R  I++ NL+  + H        H     +    D+T  E  +   GL+  L   +  D   I       P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E D         GC GG M +AF+Y  K  G+  E+ YPY G +
Sbjct:   25 HWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE 207          
The following BLAST results are available for this feature:
BLAST of CF835363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
PAPA1_CARPA5.563e-2736.95Papain OS=Carica papaya PE=1 SV=1[more]
CPGP2_ZINOF5.563e-2754.81Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CYSPL_SOLLC7.265e-2756.00Low-temperature-induced cysteine proteinase (Fragm... [more]
CATLL_FASHE1.049e-2536.79Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CATL1_SHEEP1.049e-2556.86Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
CATLL_PHACE1.370e-2537.97Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CATK_BOVIN3.052e-2537.17Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
CATK_RAT3.986e-2537.11Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATK_MOUSE3.986e-2537.11Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATK_HUMAN3.986e-2536.98Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01B22_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01B22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835363 ID=CF835363; Name=CF835363; organism=Citrus sinensis; type=EST; length=753bp
CCGTTAAAACAGTGGTTCTCTTTCTGGTCTCTCTCGTCGTCTTCTCCGCT
GTTTCATCAGGGACGTTGATCGACGATGTTGATCAGATGATCAGGCAAGT
AACGGACGGCGGTGACGAGATCCTAAGCCACCACGAGAGCACCAACAACG
ACCTCTTGGGTGCAGAGCACCACTTCTCCCTATTCAAGAAGAAGTTCAAT
AAAGCGTACGCTTCGCAGGAGGAGCACGACCATAGGTTCACTATTTTCAA
GGCCAACTTGCGACGCGCCGCGCGTCACCAGAAGCTCGACCCGAGCGCCA
CCCACGGCATCACTCAGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGG
ACGTACCTTGGCCTCAGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCA
GGCGCCGATCTTGCCTACGAATGATTTGCCGGCGGATTTTGATTGGCGAG
AGAAGGGCGCTGTAGGCCCTGTTAAAGATCAGGGTTCATGCGGATCATGC
TGGAGTTTCAGTACAACAGGGGCCTTGGAAGGTGCTAACTTCCTGGCAAC
TGGAAAGCTTGTGAGCCTTAGCGAGCAACAGCTTGTGGATTGCGATCACG
AGTGTGATCCTGAGGAACCAGGTTCTTGTGATTCTGGATGCAATGGTGGG
CTTATGAACAGTGCTTTTGAGTACACACTCAAGGCTGGTGGGCTTATGCG
GGAGGAAGACTATCCTTACACCGGCACTGATCGTGGCCACGCCTGCAAAT
TTG
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