CF835363

Overview
NameCF835363
Unique NameCF835363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 3.375e-24
Identity = 67/187 (35.83%), Postives = 96/187 (51.34%), Query Frame = 3
Query:  183 FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            +K K+ K+Y+  EE   R  +++ NL+    H K +    +G T     F+D T  EFR++   +     +   + Q  +  +  LP   DWR++G V PV++QG CGSCW+F+  GA+EG  F  TG L  LS Q L+DC            ++GC  G  + AF Y LK  GL  E  YPY G D
Sbjct:   32 WKTKYAKSYSPVEEELKR-AVWEENLKMIQLHNKENGLGKNGFTMEMNAFADTTGEEFRKSLSDILIPAAVTNPSAQKQV--SIGLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIEGQMFSKTGNLTPLSVQNLLDC-------SKSEGNNGCRWGTAHQAFNYVLKNKGLEAEATYPYEGKD 208          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.408e-24
Identity = 69/191 (36.13%), Postives = 96/191 (50.26%), Query Frame = 3
Query:  174 FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            + L+KK ++K Y S+ +   R  I++ NL+  + H        H     +    D+T  E  +   GL+         D   I       P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E         + GC GG M +AF+Y  +  G+  E+ YPY G D
Sbjct:   26 WELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSRSHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE---------NYGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQD 207          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 4.408e-24
Identity = 65/188 (34.57%), Postives = 96/188 (51.06%), Query Frame = 3
Query:  174 FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAAR-HQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL-----PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 719
            F  +  ++ + Y   +E   RF IFK N+      + +   S T GI QF+D+T  EF   Y GL     LP +  + P++  +D+     P   DWR+ GAV  VK+QG CGSCW+F++   +E    +  G LVSLSEQQ++DC          +   GC GG +N A+ + +   G+     YPY
Sbjct:   37 FEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLS----LPLNIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDC----------AVSYGCKGGWINKAYSFIISNKGVASAAIYPY 210          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.282e-23
Identity = 73/196 (37.24%), Postives = 95/196 (48.47%), Query Frame = 3
Query:  183 FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPAEFRRTYLGLRRKL--RLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 752
            ++ K  KAY   EE   R  +++ N +    H        H  T     F DLT  EF +   G RR+   R+    D   +     +P   DWR  G V PVK+QG C S W+FS TG+LEG  F  TG+LV LSEQ L+DC          +    C+GG M +AF+Y    GGL  EE YPY G   G  C++
Sbjct:   32 WRTKHGKAYNVNEERLRR-AVWEKNFKMIELHNWEYLEGKHDFTMTMNAFGDLTNTEFVKMMTGFRRQKIKRMHVFQDHQFLY----VPKYVDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDC-------MGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIGP--GRKCRY 213          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.187e-23
Identity = 49/99 (49.49%), Postives = 67/99 (67.68%), Query Frame = 3
Query:  426 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYT 722
            LP+  DWR KGAV  +K+Q  CGSCW+FS   A+E  N + TG+L+SLSEQ+LVDCD         +   GCNGG MN+AF+Y +  GG+  +++YPY+
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCD---------TASHGCNGGWMNNAFQYIITNGGIDTQQNYPYS 90          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.857e-23
Identity = 66/194 (34.02%), Postives = 99/194 (51.03%), Query Frame = 3
Query:  174 FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLD-PSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWRE-KGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHAC 746
            F LF+ +FN++Y +  E+  R +IF  NL +A R Q+ D  +A  G T FSDLT  EF + Y   R   R P    +       + +P   DWR+ K  +  VK+QGSC  CW+ +    ++    +   + V +S Q+L+DC+          C +GCNGG +  A+   L   GL  E+DYP+ G  + H C
Sbjct:   40 FKLFQIRFNRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEFGQLYGQERSPERTPNMTKKVESNTWGESVPRTCDWRKAKNIISSVKNQGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQELLDCER---------CGNGCNGGFVWDAYLTVLNNSGLASEKDYPFQGDRKPHRC 224          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.873e-23
Identity = 63/137 (45.99%), Postives = 76/137 (55.47%), Query Frame = 3
Query:  324 DLTPAEFRRTYLGLRRKLRLPKDADQAPILP-TNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            D+T  E  RT  GLR     P+      +   ++  PA  DWR KG V PVKDQG CGSCW+FS+ GALEG     TGKL+SLS Q LV C          S ++GC GG M +AFEY     G+  E+ YPY G D
Sbjct:   85 DMTSEEVVRTMTGLRVPRSRPRPNGTLYVPDWSSRAPAAVDWRRKGYVTPVKDQGQCGSCWAFSSVGALEGQLKRRTGKLLSLSPQNLVYC---------VSNNNGCGGGYMTNAFEYVRLNRGIDSEDAYPYIGQD 212          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 6.364e-23
Identity = 70/195 (35.90%), Postives = 94/195 (48.21%), Query Frame = 3
Query:  183 FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPAEFRRTYLGLRR-KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 752
            ++ K  K Y   EE   R  +++ N +    H        H  T     F DLT  EF +   G +R K++          L    +P   DWR+ G V PVK+QG C S W+FS TG+LEG  F  T +L+ LSEQ L+DC          +   GC+GG M  AF+Y    GGL  EE YPY G  +G  C++
Sbjct:   32 WRTKHGKTYNMNEERLKR-AVWEKNFKMIELHNWEYLEGRHDFTMAMNAFGDLTNIEFVKMMTGFQRQKIKKTHIFQDHQFLY---VPKRVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDC-------MGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRG--QGRECRY 213          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.364e-23
Identity = 68/193 (35.23%), Postives = 97/193 (50.26%), Query Frame = 3
Query:  183 FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGIT----QFSDLTPAEFRRTYLGL------RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            +K K+NK+Y+ +EE   R  +++  L+    H + +    +G T    +F D T  EFR+  + +        K  + ++A          LP   DWR+KG V PV+ QG C +CW+F+ TGA+E      TGKL  LS Q LVDC            ++GC GG   +AF+Y L  GGL  E  YPY G D
Sbjct:   32 WKIKYNKSYSLKEEKLKR-VVWEEKLKMIKLHNRENSLGKNGFTMKMNEFGDQTDEEFRKMMIEISVWTHREGKSIMKREAGSI-------LPKFVDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKP-------QGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKD 209          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.364e-23
Identity = 68/186 (36.56%), Postives = 96/186 (51.61%), Query Frame = 3
Query:  216 QEEHDHRFTIFKANLRRAARHQKLDP----SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND---------LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 734
            Q+E++ R  IF++N     R  K       S T  +   +DLT  EF      +R  LRLP   D      T++         LP   DWR KGAV PV++QG CGSC++F+T  ALE  +   TG+L+ LS Q +VDC            ++GC+GG M +AF+Y  +  G+  E  YPY GT++
Sbjct:  104 QKENNFRMAIFESNELMTERINKKYEQGLVSYTTALNDLADLTDEEFM-----VRNGLRLPNQTDLRGKRQTSEFYRYDKSERLPDQVDWRTKGAVTPVRNQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLG-------NNGCSGGYMPTAFQYASRY-GIAMESRYPYVGTEQ 276          
The following BLAST results are available for this feature:
BLAST of CF835363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
CATJ_RAT3.375e-2435.83Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CATK_RABIT4.408e-2436.13Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
ANAN_ANACO4.408e-2434.57Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
TEST2_MOUSE1.282e-2337.24Testin-2 OS=Mus musculus PE=2 SV=1[more]
ERVB_TABDI2.187e-2349.49Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATW_MOUSE2.857e-2334.02Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
CATK_CHICK4.873e-2345.99Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
TEST2_RAT6.364e-2335.90Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CATR_MOUSE6.364e-2335.23Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATL_BRUPA6.364e-2336.56Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01B22_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01B22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835363 ID=CF835363; Name=CF835363; organism=Citrus sinensis; type=EST; length=753bp
CCGTTAAAACAGTGGTTCTCTTTCTGGTCTCTCTCGTCGTCTTCTCCGCT
GTTTCATCAGGGACGTTGATCGACGATGTTGATCAGATGATCAGGCAAGT
AACGGACGGCGGTGACGAGATCCTAAGCCACCACGAGAGCACCAACAACG
ACCTCTTGGGTGCAGAGCACCACTTCTCCCTATTCAAGAAGAAGTTCAAT
AAAGCGTACGCTTCGCAGGAGGAGCACGACCATAGGTTCACTATTTTCAA
GGCCAACTTGCGACGCGCCGCGCGTCACCAGAAGCTCGACCCGAGCGCCA
CCCACGGCATCACTCAGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGG
ACGTACCTTGGCCTCAGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCA
GGCGCCGATCTTGCCTACGAATGATTTGCCGGCGGATTTTGATTGGCGAG
AGAAGGGCGCTGTAGGCCCTGTTAAAGATCAGGGTTCATGCGGATCATGC
TGGAGTTTCAGTACAACAGGGGCCTTGGAAGGTGCTAACTTCCTGGCAAC
TGGAAAGCTTGTGAGCCTTAGCGAGCAACAGCTTGTGGATTGCGATCACG
AGTGTGATCCTGAGGAACCAGGTTCTTGTGATTCTGGATGCAATGGTGGG
CTTATGAACAGTGCTTTTGAGTACACACTCAAGGCTGGTGGGCTTATGCG
GGAGGAAGACTATCCTTACACCGGCACTGATCGTGGCCACGCCTGCAAAT
TTG
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