CF835363

Overview
NameCF835363
Unique NameCF835363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:43..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATO_HUMAN (Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.051e-17
Identity = 57/163 (34.97%), Postives = 81/163 (49.69%), Query Frame = 3
Query:  246 FKANLRRAARHQKLDPS----ATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG-GLMREEDYPY 719
            F+ +L R      L PS    A +GI QFS L P EF+  YL  +        A+    +P   LP  FDWR+K  V  V++Q  CG CW+FS  GA+E A  +    L  LS QQ++DC +          + GCNGG   +A  +  K    L+++ +YP+
Sbjct:   44 FRESLNRHRYLNSLFPSENSTAFYGINQFSYLFPEEFKAIYLRSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYN---------NYGCNGGSTLNALNWLNKMQVKLVKDSEYPF 197          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: PEPT1_DERFA (Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.342e-17
Identity = 60/194 (30.93%), Postives = 91/194 (46.91%), Query Frame = 3
Query:  174 FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYL-------GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 734
            F  FKK FNK YA+ EE +    + + N   + ++ + +  A   I   SDL+  EF+  YL        L+ +  L  +     I   N +P++ D R    V P++ QG CGSCW+FS   A E A        + LSEQ+LVDC          +   GC+G  +    EY ++  G++ E  YPY   ++
Sbjct:   26 FEEFKKAFNKNYATVEEEE----VARKNFLESLKYVEANKGA---INHLSDLSLDEFKNRYLMSAEAFEQLKTQFDLNAETSACRINSVN-VPSELDLRSLRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNTSLDLSEQELVDC----------ASQHGCHGDTIPRGIEY-IQQNGVVEERSYPYVAREQ 200          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.518e-16
Identity = 50/143 (34.97%), Postives = 71/143 (49.65%), Query Frame = 3
Query:  294 SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG-GLMREEDYPY 719
            +A +G+ QFS L P EF+  YLG +        A+    +P   LP  FDWR+K  V PV++Q  CG CW+FS   A+E A  +    L  LS QQ++DC            +SGC GG    A  +  +    L+ +  YP+
Sbjct:   55 TAFYGVNQFSYLFPEEFKALYLGSKYAWAPRYPAEGQRPIPNVSLPLRFDWRDKHVVNPVRNQEMCGGCWAFSVVSAIESARAIQGKSLDYLSVQQVIDCSFN---------NSGCLGGSPLCALRWLNETQLKLVADSQYPF 188          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: PEPT1_PSOOV (Peptidase 1 OS=Psoroptes ovis PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.983e-16
Identity = 60/190 (31.58%), Postives = 93/190 (48.95%), Query Frame = 3
Query:  174 FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYL-------GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKL-VSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 719
            F  FKK FNK Y + E        F A+L      + ++ +    I QFSD++  EF+  YL        L+++  L   A    I   N +P + D R  G V  +K+Q +CGSCW+FS    +E +N+L+   + + LSEQ+LVDC          +   GC G  + +   Y ++  G++ E+ YPY
Sbjct:   26 FEEFKKAFNKHYVTPEAEQEARQNFLASL------EHIEKAGKGRINQFSDMSLEEFKNQYLMSDQAYEALKKEFDLDAGAQACQIGAVN-IPNEIDLRALGYVTKIKNQVACGSCWAFSGVATVE-SNYLSYDNVSLDLSEQELVDC----------ASQHGCGGDTVLNGLRY-IQKNGVVEEQSYPY 196          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.983e-16
Identity = 38/98 (38.78%), Postives = 57/98 (58.16%), Query Frame = 3
Query:  426 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 719
            +P   DWR+ GAV  VK+QG CG CW+F+    +EG   +  G LV LSEQ+++DC          +   GC GG +N A+++ +   G+  +E+YPY
Sbjct:    2 VPQSIDWRDYGAVNEVKNQGPCGGCWAFAAIATVEGIYKIRKGNLVYLSEQEVLDC----------AVSYGCKGGWVNRAYDFIISNNGVTTDENYPY 89          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CYSP_PLAFA (Trophozoite cysteine proteinase OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.383e-16
Identity = 69/230 (30.00%), Postives = 101/230 (43.91%), Query Frame = 3
Query:  114 DEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHG--ITQFSDLTPAEFRRTYLGLRR-------KLRLP-----KDADQAPILPTND----------LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            +E+    E   N++  A   F  F K+ NK Y + +E   +F IFK N      H KL+ +A +   + QFSD +  E +  +  L         K   P     KD        TN           +P   D+REKG V   KDQG CGSCW+F++ G +E         ++S SEQ++VDC  +         + GC+GG    +F Y L+   L   ++Y Y   D
Sbjct:  206 EEMKYKKEDPINNIKYASKFFK-FMKEHNKVYKNIDEQMRKFEIFKINYISIKNHNKLNKNAMYKKKVNQFSDYSEEELKEYFKTLLHVPNHMIEKYSKPFENHLKDNILISEFYTNGKRNEKDIFSKVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNIESVFAKKNKNILSFSEQEVVDCSKD---------NFGCDGGHPFYSFLYVLQ-NELCLGDEYKYKAKD 424          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVN (Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.418e-16
Identity = 66/220 (30.00%), Postives = 99/220 (45.00%), Query Frame = 3
Query:  135 ESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGIT------QFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILP----------------TNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKL-VSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG 725
            ES  +++  A   F   K+  NK Y + +E   RF  FK    +  +H ++     +G+T      Q+SD +  EF   +   ++ L +P D     I+P                + D P   D+R K    P KDQG+CGSCW+F+  G  E        ++ +S SEQQ+VDC  E         + GC+GG    AF Y +  G  + +E YPY G
Sbjct:  150 ESMQDNIKYASKFFKYMKEN-NKKYENMDEQLQRFENFKIRYMKTQKHNEM--VGKNGLTYVQKVNQYSDFSKEEFDNYF---KKLLSVPMDLKSKYIVPLKKHLANTNLISVDNKSKDFPDSRDYRSKFNFLPPKDQGNCGSCWAFAAIGNFEYLYVHTRHEMPISFSEQQMVDCSTE---------NYGCDGGNPFYAFLYMINNGVCLGDE-YPYKG 353          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: ACP2_ENTHI (Cysteine proteinase ACP2 (Fragment) OS=Entamoeba histolytica GN=ACP2 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.842e-16
Identity = 57/189 (30.16%), Postives = 94/189 (49.74%), Query Frame = 3
Query:  174 FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG---KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            F+ +  K NK + + E+   R  IF  N +      K+          F+ +T  E+R     L +  R  ++  Q   L     P   DWR++G V P++DQ  CGSC++F +  ALEG   +  G     + LSE+ +  C  +       + ++GCNGGL ++ ++Y ++  G+ +E DYPYTG+D
Sbjct:   12 FNTWASKNNKHFTAIEKLRRR-AIFNMNAKFVDSFNKIGSFKLSVDGPFAAMTNEEYRT----LLKSKRTTEENGQVKYLNIQ-APESVDWRKEGKVTPLRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHM-QCTRD-------NGNNGCNGGLGSNVYDYIIE-HGVAKESDYPYTGSD 185          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: PEPT1_EURMA (Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.285e-15
Identity = 56/193 (29.02%), Postives = 94/193 (48.70%), Query Frame = 3
Query:  174 FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYL---GLRRKLRLPKDADQ---APILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 734
            F  FKK FNK YA+ E+ +    + + N   + ++ + +  A   I   SDL+  EF+  +L       +L+   D +    A  + +  LP++ D R    V P++ QG CGSCW+FS   + E A        + L+EQ+LVDC          +  +GC+G  +    EY ++  G+++E  YPY   ++
Sbjct:   26 FEEFKKAFNKTYATPEKEE----VARKNFLESLKYVESNKGA---INHLSDLSLDEFKNQFLMNANAFEQLKTQFDLNAETYACSINSVSLPSELDLRSLRTVTPIRMQGGCGSCWAFSGVASTESAYLAYRNMSLDLAEQELVDC----------ASQNGCHGDTIPRGIEY-IQQNGVVQEHYYPYVAREQ 200          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.679e-15
Identity = 56/208 (26.92%), Postives = 94/208 (45.19%), Query Frame = 3
Query:  174 FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN---------------------DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK-LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            F  F  K+ ++Y    E   ++  FK N  +  +H + +      + QFSD +  +F   +   R+ + +P    +  ++P +                     D+P   D+REKG V   KDQG CGSCW+F++ G +E        K +++LSEQ++VDC            + GC+GG    +F Y ++  G+   +DY Y   D
Sbjct:  237 FFNFMNKYKRSYKDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQFSDYSKKDFESYF---RKLVPIPDHLKKKYVVPFSSMNNGKGKNVVTSSSGANLLADVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDC---------SKLNFGCDGGHPFYSFIYAIE-NGICMGDDYKYKAMD 431          
The following BLAST results are available for this feature:
BLAST of CF835363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
CATO_HUMAN1.051e-1734.97Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1[more]
PEPT1_DERFA2.342e-1730.93Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 P... [more]
CATO_MOUSE1.518e-1634.97Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
PEPT1_PSOOV1.983e-1631.58Peptidase 1 OS=Psoroptes ovis PE=1 SV=1[more]
MDO1_PSEMR1.983e-1638.78Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
CYSP_PLAFA3.383e-1630.00Trophozoite cysteine proteinase OS=Plasmodium falc... [more]
CYSP_PLAVN4.418e-1630.00Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=... [more]
ACP2_ENTHI9.842e-1630.16Cysteine proteinase ACP2 (Fragment) OS=Entamoeba h... [more]
PEPT1_EURMA1.285e-1529.02Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV... [more]
CYSP_PLAVS1.679e-1526.92Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01B22_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01B22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835363 ID=CF835363; Name=CF835363; organism=Citrus sinensis; type=EST; length=753bp
CCGTTAAAACAGTGGTTCTCTTTCTGGTCTCTCTCGTCGTCTTCTCCGCT
GTTTCATCAGGGACGTTGATCGACGATGTTGATCAGATGATCAGGCAAGT
AACGGACGGCGGTGACGAGATCCTAAGCCACCACGAGAGCACCAACAACG
ACCTCTTGGGTGCAGAGCACCACTTCTCCCTATTCAAGAAGAAGTTCAAT
AAAGCGTACGCTTCGCAGGAGGAGCACGACCATAGGTTCACTATTTTCAA
GGCCAACTTGCGACGCGCCGCGCGTCACCAGAAGCTCGACCCGAGCGCCA
CCCACGGCATCACTCAGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGG
ACGTACCTTGGCCTCAGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCA
GGCGCCGATCTTGCCTACGAATGATTTGCCGGCGGATTTTGATTGGCGAG
AGAAGGGCGCTGTAGGCCCTGTTAAAGATCAGGGTTCATGCGGATCATGC
TGGAGTTTCAGTACAACAGGGGCCTTGGAAGGTGCTAACTTCCTGGCAAC
TGGAAAGCTTGTGAGCCTTAGCGAGCAACAGCTTGTGGATTGCGATCACG
AGTGTGATCCTGAGGAACCAGGTTCTTGTGATTCTGGATGCAATGGTGGG
CTTATGAACAGTGCTTTTGAGTACACACTCAAGGCTGGTGGGCTTATGCG
GGAGGAAGACTATCCTTACACCGGCACTGATCGTGGCCACGCCTGCAAAT
TTG
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