CF835373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFM_ARATH (Auxin response factor 13 OS=Arabidopsis thaliana GN=ARF13 PE=2 SV=3) HSP 1 Score: 135.961 bits (341), Expect = 1.130e-31 Identity = 64/140 (45.71%), Postives = 91/140 (65.00%), Query Frame = 2 Query: 104 LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEAFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSR 523 +Y +LW+ CAGPL +P+ GE+VYYFPQGHIE +E ST D P++DLPSK+ CRV+ + K + +TDE +AQ++L+P++ + V R V+ F K LTASD S GG + +++A EC PPLDMS+ Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVVAIDRKVDKNTDEVYAQISLMPDTTE----VMTHNTTMDTRRPIVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQ 157
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFO_ORYSJ (Auxin response factor 15 OS=Oryza sativa subsp. japonica GN=ARF15 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 6.203e-30 Identity = 74/170 (43.53%), Postives = 98/170 (57.65%), Query Frame = 2 Query: 41 ERQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEAFAQVTLLPESNQDENAV---EKEXXXXXXXRFH--VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPT 535 E +N ++ R G A+ ELWHACAGP+ +PR+G V Y PQGH+E + + A +P + CRV++V L A+ TDE +AQ++L+PE + E E RF H FCKTLTASDTSTHGGFSV RR A++C PPLD S+Q P+ Sbjct: 18 EEVAANGSSPAPARAG----AVCLELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAA----VPPHVFCRVVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPS 179
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFB_ORYSJ (Auxin response factor 2 OS=Oryza sativa subsp. japonica GN=ARF2 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.805e-29 Identity = 71/155 (45.81%), Postives = 91/155 (58.71%), Query Frame = 2 Query: 101 ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEAFAQVTLLPESNQDENAV-----------EKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPP 532 A+ ELWHACAGP+ +PR+G V Y PQGH+E + A A P +P + CRV++V L A+ TDE +AQV+L+ ++ + E + E E R H FCKTLTASDTSTHGGFSV RR A++C PPLD S Q P Sbjct: 35 AVCLELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGA-----APGSGPGAAVPPHVFCRVVDVSLHADAATDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARIP-HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRP 183
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFC_ORYSJ (Auxin response factor 3 OS=Oryza sativa subsp. japonica GN=ARF3 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.689e-27 Identity = 68/169 (40.24%), Postives = 93/169 (55.03%), Query Frame = 2 Query: 56 NSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEAFAQVTLLPES-----NQDENAVEKEXXXXXXXRFH----VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPT 535 N+T SG + + +LWHACAGP+V++PR G V Y PQGH+ A + + LP + CRV++V+L A+ TDE +A++ L E N +E+E +H FCKTLTASDTSTHGGFSV RR A++C PPLD + P+ Sbjct: 63 NNTASGGEEDAPAPGPVCRDLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGIRGEVAVA---LPPHVACRVVDVELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPS 228
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFN_ORYSJ (Auxin response factor 14 OS=Oryza sativa subsp. japonica GN=ARF14 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 3.522e-25 Identity = 63/155 (40.65%), Postives = 84/155 (54.19%), Query Frame = 2 Query: 101 ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEAFAQVTLLPESNQ----------DENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPT 535 A+ ELWHACAGP V +PR G + Y PQ H+ + +V +P + CRV+ V+L+A+ TDE +A++ L+ E ++ A E E H FCKTLTASDTSTHGGFSV RR A++C PPLD P+ Sbjct: 19 AVCGELWHACAGPGVALPRRGSALVYLPQAHLA-ADGGGGEVPPAGAAA--VPPHVACRVVGVELRADAATDEVYARLALVAEGEMLQRNFREGGGEDGAGEMEGCDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPS 170
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFH_ORYSJ (Auxin response factor 8 OS=Oryza sativa subsp. japonica GN=ARF8 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.636e-22 Identity = 58/146 (39.73%), Postives = 80/146 (54.79%), Query Frame = 2 Query: 95 EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEAFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPP 532 E + +LW ACAG + TVP G VYYFPQGH E +A ++ +P+ + CRV +V+ A+PDTDE FA++ L+P ++ VE++ SF KTLT SD + GGFSV R A+ P LD + PP Sbjct: 15 ERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALG----LAAPELSAARVPALVPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPP 156
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFR_ORYSJ (Auxin response factor 18 OS=Oryza sativa subsp. japonica GN=ARF18 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 4.761e-22 Identity = 60/158 (37.97%), Postives = 83/158 (52.53%), Query Frame = 2 Query: 77 KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEAFAQVTLLP-ESNQDENAVEKEXXXXXXXRFHVH-----SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPP 532 +R + + L +LWHACAG +V +P +VYYFPQGH E + + P +P+ +LCRV V+ A+PDTDE FA++ L+P +N+ A + + SF KTLT SD + GGFSV R A+ P LD S PP Sbjct: 11 ERERESDKCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGH----GPVEFPGGRVPALVLCRVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPP 164
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFJ_ARATH (Auxin response factor 10 OS=Arabidopsis thaliana GN=ARF10 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.874e-21 Identity = 61/156 (39.10%), Postives = 81/156 (51.92%), Query Frame = 2 Query: 89 DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEAFAQVTLLPESNQD---EN-----AVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPP 532 + E +L +LWHACAG +V +P V+YF QGH E A + A + +P ILCRV++V+ A+ +TDE FA++TLLP D EN + SF KTLT SD + GGFSV R A+ P LD S +PP Sbjct: 2 EQEKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHAPR------VPPLILCRVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPP 151
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFJ_ORYSJ (Auxin response factor 10 OS=Oryza sativa subsp. japonica GN=ARF10 PE=2 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 2.000e-20 Identity = 59/155 (38.06%), Postives = 83/155 (53.55%), Query Frame = 2 Query: 86 GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEAFAQVTLLPESNQD------ENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPP 532 GD ++ ++LW ACAG + +VP G VYYFPQGH EQ A+ + + + +P + CRV+ V+ A+ ++DE FA++ L+P D E A + R SF KTLT SD + GGFSV R A+ P LD S +PP Sbjct: 13 GDGGGSVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDLSSAR------VPPLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPP 161
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFJ_ORYSI (Auxin responsive factor 10 OS=Oryza sativa subsp. indica GN=ARF10 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 2.000e-20 Identity = 59/155 (38.06%), Postives = 83/155 (53.55%), Query Frame = 2 Query: 86 GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEAFAQVTLLPESNQD------ENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPP 532 GD ++ ++LW ACAG + +VP G VYYFPQGH EQ A+ + + + +P + CRV+ V+ A+ ++DE FA++ L+P D E A + R SF KTLT SD + GGFSV R A+ P LD S +PP Sbjct: 13 GDGGGSVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDLSSAR------VPPLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPP 161 The following BLAST results are available for this feature:
BLAST of CF835373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835373 ID=CF835373; Name=CF835373; organism=Citrus sinensis; type=EST; length=537bpback to top |