CF835376

Overview
NameCF835376
Unique NameCF835376
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:941..1817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: STP1_ARATH (Sugar transport protein 1 OS=Arabidopsis thaliana GN=STP1 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.276e-14
Identity = 55/195 (28.21%), Postives = 97/195 (49.74%), Query Frame = -3
Query:  288 QQLSGINGVLFYSSNIFANAGISS--SNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGM----AASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 854
            QQL+GIN ++FY+  +F   G ++  S ++    G V V AT V+ + +D+ GRR       + M    A     +   F ++G   E  ++Y+I+ +  +      V  F+   G + W++ SEI P+ I+S A S+    N + ++I+      +L     G FL++         FV +++PETKG  +EE+
Sbjct:  294 QQLTGINVIMFYAPVLFNTIGFTTDASLMSAVVTGSVNVAATLVSIYGVDRWGRRFLFLEGGTQMLICQAVVAACIGAKFGVDGTPGELPKWYAIVVVTFIC---IYVAGFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVNMIFTFIIAQIFLTMLCHLKFGLFLVFAFFVVVMSIFVYIFLPETKGIPIEEM 485          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: GTR9_HUMAN (Solute carrier family 2, facilitated glucose transporter member 9 OS=Homo sapiens GN=SLC2A9 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.276e-14
Identity = 50/194 (25.77%), Postives = 91/194 (46.91%), Query Frame = -3
Query:  276 QLSGINGVLFYSSNIFANAGISSSNV--ATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 851
            QL G+N + FY+++IF  AGI  + +   T   G ++ +A   +  +++  GRR         M   F  ++I   L+            +  LS+VG++ ++ SF  G G IP+++  E    + +  A  +A   NWL ++ V +   F+        FL++  +C     ++   +PETK R+  EI  +F
Sbjct:  328 QLCGLNAIWFYTNSIFGKAGIPLAKIPYVTLSTGGIETLAAVFSGLVIEHLGRRPLLIGGFGLMGLFFGTLTITLTLQDHAPW-------VPYLSIVGILAIIASFCSGPGGIPFILTGEFFQQSQRPAAFIIAGTVNWLSNFAVGLLFPFIQKSLDTYCFLVFATICITGAIYLYFVLPETKNRTYAEISQAF 514          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: YD387_YEAST (Probable metabolite transport protein YDR387C OS=Saccharomyces cerevisiae GN=YDR387C PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.891e-14
Identity = 54/197 (27.41%), Postives = 86/197 (43.65%), Query Frame = -3
Query:  288 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMT-ANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 875
            G  L+  QQ++G N  ++Y++ IF+   I +  +    +     + T    + MD  GRR         M     L S+     GF  +          L L+ +V  V +++  +G++PW  + E LP+N +S   S     NWL +  V+MT  + +       T LI+         FV  W PE KG SLEE+
Sbjct:  354 GCMLMFFQQITGFNAFMYYAAIIFSKFNIKNPLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIMTVGLLLCSV-----GFGHDQVN-------LLLISVVIYVAAYASAMGSVPWTCV-EFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDENTMLIFAFFTVCAWFFVYFWYPEVKGLSLEEV 537          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: STC_RICCO (Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.999e-14
Identity = 56/201 (27.86%), Postives = 96/201 (47.76%), Query Frame = -3
Query:  288 IGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGL--GVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIA----FFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 872
            I +   QQL+GIN ++FY+  +F   G  S       +  G+V V AT V+ + +DK GRR         M     +V+      F ++G   +  ++Y+++ +L +   V+    F+   G + W++ SEI P+ I+S A SV    N   +++V      +L     G F+ +         FV  ++PETKG  +EE+
Sbjct:  290 IAIPFFQQLTGINVIMFYAPVLFDTIGFGSDAALMSAVITGLVNVFATMVSIYGVDKWGRRFLFLEGGVQMLICQAIVAACIGAKFGVDGAPGDLPQWYAVVVVLFICIYVS---GFAWSWGPLGWLVPSEIFPLEIRSAAQSVNVSVNMFFTFVVAQVFLIMLCHLKFGLFIFFSFFVLIMSIFVYYFLPETKGIPIEEM 487          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: RCO3_NEUCR (Probable glucose transporter rco-3 OS=Neurospora crassa GN=rco-3 PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 8.999e-14
Identity = 51/206 (24.76%), Postives = 94/206 (45.63%), Query Frame = -3
Query:  288 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGG----------TFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 875
            G  L +LQQL+G+N +++Y +  F NAG+ +    +  + V+   +T    ++++  GRR        GMA    L++      G     S   S    + +  +   +  F+   G + WV+ SEI P+ +++ + S+ T +NW +++ +     ++   S+             F ++G  C   V FV   V ET   SLE+I
Sbjct:  285 GCCLQMLQQLTGVNFIMYYGTTFFNNAGVGNPFKISLIMQVINTASTIPGLFVVESWGRRRLLMVGAIGMAICQLLIAAFATASG-----SNNLSAQNKVLITFVAIYIFFFAASWGPVVWVVTSEIYPLKVRAKSMSITTASNWFLNFGIAYGTPYMQTNSAASDESSIDLGSKVFFVWGAFCIVAVGFVWCMVYETSKISLEQI 485          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: STL1_YEAST (Sugar transporter STL1 OS=Saccharomyces cerevisiae GN=STL1 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.175e-13
Identity = 53/197 (26.90%), Postives = 91/197 (46.19%), Query Frame = -3
Query:  276 QQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNT----WLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 854
            QQ +G N  ++YS+ +F N  I      +  +G V      ++T    +L++K GRR       +G A SF +       E    E++R        + VGL   +  F L + ++PW+   EI  + +++   + +T  NWL ++ V M     +  S  G +L + ++    +  +  + PET GRSLEEI   F
Sbjct:  302 QQFTGCNAAIYYSTVLF-NKTIKLDYRLSMIIGGVFATIYALSTIGSFFLIEKLGRRKLFLLGATGQAVSFTITFACLVKEN--KENARG-------AAVGLFLFITFFGLSLLSLPWIYPPEIASMKVRASTNAFSTCTNWLCNFAVVMFTPIFIGQSGWGCYLFFAVMNYLYIPVIFFFYPETAGRSLEEIDIIF 488          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: HXT2_YEAST (High-affinity glucose transporter HXT2 OS=Saccharomyces cerevisiae GN=HXT2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.535e-13
Identity = 53/197 (26.90%), Postives = 93/197 (47.21%), Query Frame = -3
Query:  288 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVS-EDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 875
            GI +  LQQL+G N   +Y + IF   G+  S   +  LG+V   +T V  + +DK GRR       + MA  F + S       + + +D       G + +V     +  F++    I +VI++E  P+ +K+ A ++A  ANW+  +++     F+          ++     F+  +V  +V ETKG +LEE+
Sbjct:  319 GIMIQSLQQLTGNNYFFYYGTTIFNAVGMKDSFQTSIVLGIVNFASTFVALYTVDKFGRRKCLLGGSASMAICFVIFSTVGVTSLYPNGKDQPSSKAAGNVMIVFTCLFIFFFAISWAPIAYVIVAESYPLRVKNRAMAIAVGANWIWGFLIGFFTPFITSAIGFSYGYVFMGCLVFSFFYVFFFVCETKGLTLEEV 515          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: INT3_ARATH (Probable inositol transporter 3 OS=Arabidopsis thaliana GN=INT3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13
Identity = 39/104 (37.50%), Postives = 64/104 (61.54%), Query Frame = -3
Query:  285 SILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLD-WSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQ 593
            S  G L++V L   +I ++ G+G +PW++ SEI P+  + LAG +A ++NW+ + +V+ T   L +   S GTFL++    A  + F+ L VPETKG   EE++
Sbjct:  453 SKFGYLAIVFLGLYIIVYAPGMGTVPWIVNSEIYPLRYRGLAGGIAAVSNWMSNLVVSETFLTLTNAVGSSGTFLLFAGSSAVGLFFIWLLVPETKGLQFEEVE 556          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: HXT10_YEAST (Hexose transporter HXT10 OS=Saccharomyces cerevisiae GN=HXT10 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13
Identity = 57/200 (28.50%), Postives = 99/200 (49.50%), Query Frame = -3
Query:  288 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGF-VSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFL---LDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 875
            GI +  LQQL+G N   +Y + IF   G+  S   +  LG V   +T V  +++DK GRR       + MA  F + +       +   +D       G + +V     + SF++    I +VI++E  P+ +K+ A ++A  ANW+  +++     F+   + +S G  F+  G +  F+  +V  +V ETKG +LEE+
Sbjct:  312 GIVIQSLQQLTGCNYFFYYGTTIFNAVGMQDSFETSIVLGAVNFASTFVALYIVDKFGRRKCLLWGSASMAICFVIFATVGVTRLWPQGKDQPSSQSAGNVMIVFTCFFIFSFAITWAPIAYVIVAETYPLRVKNRAMAIAVGANWMWGFLIGFFTPFITRSIGFSYGYVFM--GCL-IFSYFYVFFFVCETKGLTLEEV 508          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: ITR2_SCHPO (Myo-inositol transporter 2 OS=Schizosaccharomyces pombe GN=itr2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.420e-13
Identity = 58/211 (27.49%), Postives = 98/211 (46.45%), Query Frame = -3
Query:  255 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAF-FLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSS---GGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR*NCWLA 875
            G  L   QQ SG N + ++S+ IF + G  +S   +  +G    V T V    +D+ GRR       + M A   L +IA+ FL    ++++   S    + L  ++  + S++ G+G IPW   +E+ P+ +++L    +T  NW+ + I+  +A+FL    S    GTF ++   C   +       PE  G S+E I        W A
Sbjct:  336 GCFLQWFQQFSGTNAIQYFSAIIFQSVGFKNSISVSIVVGATNFVFTIVAFMFIDRIGRRRILLCTSAVMIAGLALCAIAYHFLPADTTQNTN--SGWQYVVLASIIIFLASYASGIGNIPWQ-QAELFPMEVRALGAGFSTAINWVGNLII--SASFLTMMESITPTGTFALFAGFCFVGLVTSYFTYPELAGMSIENIHKLLEKGFWQA 541          
The following BLAST results are available for this feature:
BLAST of CF835376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
STP1_ARATH5.276e-1428.21Sugar transport protein 1 OS=Arabidopsis thaliana ... [more]
GTR9_HUMAN5.276e-1425.77Solute carrier family 2, facilitated glucose trans... [more]
YD387_YEAST6.891e-1427.41Probable metabolite transport protein YDR387C OS=S... [more]
STC_RICCO8.999e-1427.86Sugar carrier protein C OS=Ricinus communis GN=STC... [more]
RCO3_NEUCR8.999e-1424.76Probable glucose transporter rco-3 OS=Neurospora c... [more]
STL1_YEAST1.175e-1326.90Sugar transporter STL1 OS=Saccharomyces cerevisiae... [more]
HXT2_YEAST1.535e-1326.90High-affinity glucose transporter HXT2 OS=Saccharo... [more]
INT3_ARATH2.618e-1337.50Probable inositol transporter 3 OS=Arabidopsis tha... [more]
HXT10_YEAST2.618e-1328.50Hexose transporter HXT10 OS=Saccharomyces cerevisi... [more]
ITR2_SCHPO3.420e-1327.49Myo-inositol transporter 2 OS=Schizosaccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C07_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835376 ID=CF835376; Name=CF835376; organism=Citrus sinensis; type=EST; length=877bp
TTTTTTTTTTTTTTTCCCAAAACTGGAGATAATTATTTACTACCCCTTAA
TGTTCCAGTGAAAAAGAGTAATTTATCCATTGCCCTTTCCTTTTCCCCTT
CAACAACACCACAAAGCAACTGTCGTAGACCGCCCCTACAGATGATACAA
TGAACTATGGAGCAATGATGGAAGCAATTCGCACAAATAAAAGCGCATTG
ACATATACTTGGGAAGGATTAGGACACATGGGTGGAGAAGCTCTTTATTA
CAAATGCAAGCCAACAATTTTATCTGAAGGAAAACTGAATTTCTTCCAGA
CTTCTTCCTTTGGTTTCAGGAACCCAGAGAGACACAAAAGCAACAGTGAA
AGCACACACTATCCCGTATATCAAGAAGGTGCCTCCACTGCTCCAATCTA
ACAGAAAATTTGCAGTCATTGTGACAATCCACGATACCAGCCAGTTTGCC
AACGTTGCAACACTGCCAGCAAGGCTCTTGATATTCACTGGAAGTATCTC
GGACATTATAACCCAAGGAATAGCTCCAACTCCCAAAGAGAATGAAATCA
CTACAGTCACAAGACCGACAAGCGACAATATCCCCAATATGCTATAAAAG
CGAGAATCTTCTGACACAAAACCCTCCAAAAAGAATGCAATCGAAACAAG
GAAAAAACTAGCAGCCATTCCAGATGATGATATTAAAAGAAGAAGCCTGC
GGCCAGCTTTGTCCATCAACCATGTATTGACCCCAGTGGCAACAACCTGA
ACAACCCCAAGTCCAAATGTAGCAACGTTACTTGATGAAATCCCAGCGTT
AGCAAAAATGTTACTGGAATAGAATAAAACACCATTGATGCCACTGAGTT
GCTGAAGAACCAGTAATCCTATTCCTA
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