CF835376

Overview
NameCF835376
Unique NameCF835376
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: STP7_ARATH (Sugar transport protein 7 OS=Arabidopsis thaliana GN=STP7 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.466e-13
Identity = 58/195 (29.74%), Postives = 98/195 (50.26%), Query Frame = -3
Query:  288 VLQQLSGINGVLFYSSNIFANAGI--SSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLE-GFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIY-GIVCAFTVAFVSLWVPETKGRSLEEI 860
            + Q L+GIN +LFY+  +F   G   ++S  ++   G V V++T ++  L+D+ GRR         M     +V++   ++ G   E S+ YS++ ++ +      V++F    G + W I SEI P+  +S   S+    N L ++I+      LL     G FL + G V   T+ FV   +PETKG  +EE+
Sbjct:  294 MFQILTGINSILFYAPVLFQTMGFGGNASLYSSALTGAVLVLSTFISIGLVDRLGRRALLITGGIQMIICQVIVAVILGVKFGDNQELSKGYSVIVVIFIC---LFVVAFGWSWGPLGWTIPSEIFPLETRSAGQSITVAVNLLFTFIIAQAFLGLLCAFKFGIFLFFAGWVTVMTI-FVYFLLPETKGVPIEEM 484          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: HXT8_YEAST (Hexose transporter HXT8 OS=Saccharomyces cerevisiae GN=HXT8 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.466e-13
Identity = 59/197 (29.95%), Postives = 93/197 (47.21%), Query Frame = -3
Query:  288 LQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFL---VSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIV----CAFTVAFVSLWVPETKGRSLEEI 857
            LQQL+G N   +Y + IF + G++ S   +  LG+V   +   + + +DK GRR       + M A   +   V +        SE S      G  ++V     +  FS   G + +VI+SE  P+ ++S   SVAT AN L  +++     F   + +      YG V     AF+  +V  +VPETKG +LEE+
Sbjct:  336 LQQLTGDNYFFYYGTTIFKSVGMNDSFETSIVLGIVNFASCFFSLYSVDKLGRRRCLLLGAATMTACMVIYASVGVTRLYPNGKSEPSS--KGAGNCTIVFTCFYIFCFSCTWGPVCYVIISETFPLRVRSKCMSVATAANLLWGFLI----GFFTPFITSAINFYYGYVFMGCLAFSYFYVFFFVPETKGLTLEEV 526          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: YB91_YEAST (Probable metabolite transport protein YBR241C OS=Saccharomyces cerevisiae GN=YBR241C PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.833e-13
Identity = 49/191 (25.65%), Postives = 83/191 (43.46%), Query Frame = -3
Query:  300 IGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRS 872
            + +L  QQ  GIN ++FY   +        S    F + ++ VV T   + ++D  GRR       + M A   L+S+   L             +  L +      + +F++G+G IP++I+ E+      + A S  T+ NWL ++IV            G  F I+  + A    +V   VPETKG++
Sbjct:  301 LAILSCQQFCGINSIIFYGVKVIGKILPDYSIQVNFAISILNVVVTLAASAIIDHVGRRPLLLASTTVMTAMSLLISVGLTLS------------VSFLLVTATFVYIAAFAIGLGPIPFLIIGELSYPQDAATAQSFGTVCNWLATFIVGYLFPIGHGLMGGYVFAIFAAIAAMFATYVYKRVPETKGKT 479          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: HXT9_YEAST (Hexose transporter HXT9 OS=Saccharomyces cerevisiae GN=HXT9 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.833e-13
Identity = 54/204 (26.47%), Postives = 97/204 (47.55%), Query Frame = -3
Query:  288 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVS----IAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIV----CAFTVAFVSLWVPETKGRSLEEI 875
            G+ +  LQQL+G N   +Y + IF + G+  S   +  +GVV   ++ +  + +++ GRR       + M   F + +       + +G   +D       G   +V  +  + SF+       +VI+SE  P+ +KS   ++AT ANW+  ++++    F+    +G     YG V      F   +V  +VPETKG +LEE+
Sbjct:  324 GVMIQSLQQLTGDNYFFYYGTTIFKSVGLKDSFQTSIIIGVVNFFSSFIAVYTIERFGRRTCLLWGAASMLCCFAVFASVGVTKLWPQGSSHQDITSQG-AGNCMIVFTMFFIFSFATTWAGGCYVIVSETFPLRVKSRGMAIATAANWMWGFLISFFTPFI----TGAINFYYGYVFLGCLVFAYFYVFFFVPETKGLTLEEV 522          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: HXT11_YEAST (Hexose transporter HXT11 OS=Saccharomyces cerevisiae GN=HXT11 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.833e-13
Identity = 54/204 (26.47%), Postives = 97/204 (47.55%), Query Frame = -3
Query:  288 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVS----IAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIV----CAFTVAFVSLWVPETKGRSLEEI 875
            G+ +  LQQL+G N   +Y + IF + G+  S   +  +GVV   ++ +  + +++ GRR       + M   F + +       + +G   +D       G   +V  +  + SF+       +VI+SE  P+ +KS   ++AT ANW+  ++++    F+    +G     YG V      F   +V  +VPETKG +LEE+
Sbjct:  324 GVMIQSLQQLTGDNYFFYYGTTIFKSVGLKDSFQTSIIIGVVNFFSSFIAVYTIERFGRRTCLLWGAASMLCCFAVFASVGVTKLWPQGSSHQDITSQG-AGNCMIVFTMFFIFSFATTWAGGCYVIVSETFPLRVKSRGMAIATAANWMWGFLISFFTPFI----TGAINFYYGYVFLGCLVFAYFYVFFFVPETKGLTLEEV 522          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: HXT5_YEAST (Probable glucose transporter HXT5 OS=Saccharomyces cerevisiae GN=HXT5 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.950e-13
Identity = 54/208 (25.96%), Postives = 93/208 (44.71%), Query Frame = -3
Query:  267 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFL-VSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIV----CAFTVAFVSLWVPETKGRSLEEIQFSFR*N 875
            G+ +  LQQL+G N   +Y + IF   G+  S      LGVV  V+T  + + +D+ GRR        GM   + +  S+         +D       G   +V     +  F+     + +V++SE  P+ ++  A S+A+  NW+  ++++    F+    +      YG V      F   +V  +VPETKG +LEE+   +  N
Sbjct:  349 GMMIQSLQQLTGDNYFFYYGTTIFQAVGLEDSFETAIVLGVVNFVSTFFSLYTVDRFGRRNCLLWGCVGMICCYVVYASVGVTRLWPNGQDQPSSKGAGNCMIVFACFYIFCFATTWAPVAYVLISESYPLRVRGKAMSIASACNWIWGFLISFFTPFI----TSAINFYYGYVFMGCMVFAYFYVFFFVPETKGLTLEEVNEMYEEN 552          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: STA_RICCO (Sugar carrier protein A OS=Ricinus communis GN=STA PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.300e-12
Identity = 51/197 (25.89%), Postives = 92/197 (46.70%), Query Frame = -3
Query:  273 QQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVV---ATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 854
            Q L+GIN +LFY+  +F + G    N A +   V   V   +T ++   +D+ GRR         M     +V+I   ++    ++ +      +L ++ +   V++F    G + W + SEI P+  +S   S+    N   ++++  +   LL     G FL +        AFV +++PETKG  +EE+ F +R
Sbjct:  296 QILTGINIILFYAPPLFQSMGFGG-NAALYSSAVTGAVLCSSTFISIATVDRLGRRFLLISGGIQMITCQVIVAIILGVK--FGDNQQLSKSFSVLVVIMICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQSFPSLLCAFKFGIFLFFAGWVTVMTAFVYIFLPETKGVPIEEMIFLWR 489          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: HXT4_YEAST (Low-affinity glucose transporter HXT4 OS=Saccharomyces cerevisiae GN=HXT4 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.300e-12
Identity = 54/198 (27.27%), Postives = 91/198 (45.96%), Query Frame = -3
Query:  288 LQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVS----IAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIV----CAFTVAFVSLWVPETKGRSLEEI 857
            LQQL+G N   +Y + +F   G+  S   +  LG+V   +T V  +L+++ GRR       + M A   + +       +  G  +  S+     G   +V     +  F+     IP+V+ SE  P+ +KS   ++A   NW+  +++     F   + SG     YG V      F+  +V  +VPETKG +LEE+
Sbjct:  340 LQQLTGDNYFFYYGTTVFTAVGLEDSFETSIVLGIVNFASTFVGIFLVERYGRRRCLLWGAASMTACMVVFASVGVTRLWPNGKKNGSSKG---AGNCMIVFTCFYLFCFATTWAPIPFVVNSETFPLRVKSKCMAIAQACNWIWGFLI----GFFTPFISGAIDFYYGYVFMGCLVFSYFYVFFFVPETKGLTLEEV 530          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: STP14_ARATH (Sugar transport protein 14 OS=Arabidopsis thaliana GN=STP14 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.697e-12
Identity = 53/202 (26.24%), Postives = 93/202 (46.04%), Query Frame = -3
Query:  273 IGLLVLQQLSGINGVLFYSSNIFANAGI--SSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 872
            IGL   QQL+G+N +LFY+  +F + G   S+S +++       VVA  ++ +  DK GRR         M     +V +   L+    E       LG++ +V +   V+++    G + W++ SE+ P+  +S   SV    N   + ++       L     G FL++  +     +FV   +PETK   +EE+   +R
Sbjct:  291 IGLPAFQQLTGMNSILFYAPVMFQSLGFGGSASLISSTITNAALVVAAIMSMYSADKFGRRFLLLEASVEMFCYMVVVGVTLALK--FGEGKELPKSLGLILVVLICLFVLAYGRSWGPMGWLVPSELFPLETRSAGQSVVVCVNLFFTALIAQCFLVSLCHLKYGIFLLFAGLILGMGSFVYFLLPETKQVPIEEVYLLWR 490          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: HEX6_RICCO (Hexose carrier protein HEX6 OS=Ricinus communis GN=HEX6 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.217e-12
Identity = 50/202 (24.75%), Postives = 93/202 (46.04%), Query Frame = -3
Query:  273 IGLLVLQQLSGINGVLFYSSNIFANAGI--SSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 872
            + +   QQ++GIN + FY+  +F   G+  S+S +++   G+V   +T ++  ++DK GRR         M  +  +V      E  + +          + L+ +   V  F    G + W++ SEI P+ I+S   S+    ++L +++V  T   +L     G F  +G       AFV   +PETK   +E++   +R
Sbjct:  288 VAIPFFQQVTGINVIAFYAPILFRTIGLEESASLLSSIVTGLVGSASTFISMLIVDKLGRRALFIFGGVQMFVAQIMVGSIMAAE--LGDHGGIGKGYAYIVLILICIYVAGFGWSWGPLGWLVPSEIFPLEIRSAGQSIVVAVSFLFTFVVAQTFLSMLCHFKSGIFFFFGGWVVVMTAFVHFLLPETKKVPIEKMDIVWR 487          
The following BLAST results are available for this feature:
BLAST of CF835376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
STP7_ARATH4.466e-1329.74Sugar transport protein 7 OS=Arabidopsis thaliana ... [more]
HXT8_YEAST4.466e-1329.95Hexose transporter HXT8 OS=Saccharomyces cerevisia... [more]
YB91_YEAST5.833e-1325.65Probable metabolite transport protein YBR241C OS=S... [more]
HXT9_YEAST5.833e-1326.47Hexose transporter HXT9 OS=Saccharomyces cerevisia... [more]
HXT11_YEAST5.833e-1326.47Hexose transporter HXT11 OS=Saccharomyces cerevisi... [more]
HXT5_YEAST9.950e-1325.96Probable glucose transporter HXT5 OS=Saccharomyces... [more]
STA_RICCO1.300e-1225.89Sugar carrier protein A OS=Ricinus communis GN=STA... [more]
HXT4_YEAST1.300e-1227.27Low-affinity glucose transporter HXT4 OS=Saccharom... [more]
STP14_ARATH1.697e-1226.24Sugar transport protein 14 OS=Arabidopsis thaliana... [more]
HEX6_RICCO2.217e-1224.75Hexose carrier protein HEX6 OS=Ricinus communis GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C07_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835376 ID=CF835376; Name=CF835376; organism=Citrus sinensis; type=EST; length=877bp
TTTTTTTTTTTTTTTCCCAAAACTGGAGATAATTATTTACTACCCCTTAA
TGTTCCAGTGAAAAAGAGTAATTTATCCATTGCCCTTTCCTTTTCCCCTT
CAACAACACCACAAAGCAACTGTCGTAGACCGCCCCTACAGATGATACAA
TGAACTATGGAGCAATGATGGAAGCAATTCGCACAAATAAAAGCGCATTG
ACATATACTTGGGAAGGATTAGGACACATGGGTGGAGAAGCTCTTTATTA
CAAATGCAAGCCAACAATTTTATCTGAAGGAAAACTGAATTTCTTCCAGA
CTTCTTCCTTTGGTTTCAGGAACCCAGAGAGACACAAAAGCAACAGTGAA
AGCACACACTATCCCGTATATCAAGAAGGTGCCTCCACTGCTCCAATCTA
ACAGAAAATTTGCAGTCATTGTGACAATCCACGATACCAGCCAGTTTGCC
AACGTTGCAACACTGCCAGCAAGGCTCTTGATATTCACTGGAAGTATCTC
GGACATTATAACCCAAGGAATAGCTCCAACTCCCAAAGAGAATGAAATCA
CTACAGTCACAAGACCGACAAGCGACAATATCCCCAATATGCTATAAAAG
CGAGAATCTTCTGACACAAAACCCTCCAAAAAGAATGCAATCGAAACAAG
GAAAAAACTAGCAGCCATTCCAGATGATGATATTAAAAGAAGAAGCCTGC
GGCCAGCTTTGTCCATCAACCATGTATTGACCCCAGTGGCAACAACCTGA
ACAACCCCAAGTCCAAATGTAGCAACGTTACTTGATGAAATCCCAGCGTT
AGCAAAAATGTTACTGGAATAGAATAAAACACCATTGATGCCACTGAGTT
GCTGAAGAACCAGTAATCCTATTCCTA
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