CF835376

Overview
NameCF835376
Unique NameCF835376
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: YIR0_YEAST (Putative transporter-like protein YIL170W OS=Saccharomyces cerevisiae GN=YIL170W PE=5 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.895e-12
Identity = 54/204 (26.47%), Postives = 96/204 (47.06%), Query Frame = -3
Query:  288 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVS----IAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIV----CAFTVAFVSLWVPETKGRSLEEI 875
            G+ +  LQQL+G N   +Y + IF + G+  S   +  +GVV   ++ +  + +++ GRR       + M   F + +       + +G   +D       G   +V  +  + SF+       +VI+SE  P+  KS   ++AT ANW+  ++++    F+    +G     YG V      F   +V  +VPETKG +LEE+
Sbjct:  214 GVIIQSLQQLTGDNYFFYYGTTIFKSVGLKDSFQTSIIIGVVNFFSSFIAVYTIERFGRRTCLLWGAASMLCCFAVFASVGVTKLWPQGSSHQDITSQG-AGNCMIVFTMFFIFSFATTWAGGCFVIVSETFPLRAKSRGMAIATAANWMWGFLISFFTPFI----TGAINFYYGYVFLGCLVFAYFYVFFFVPETKGLTLEEV 412          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: HXT17_YEAST (Hexose transporter HXT17 OS=Saccharomyces cerevisiae GN=HXT17 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.895e-12
Identity = 56/205 (27.32%), Postives = 92/205 (44.88%), Query Frame = -3
Query:  276 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFL-VSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIV---CAFTV-AFVSLWVPETKGRSLEEIQFSF 875
            GI +    QL+G N   FY + IF + G++     +  LG V   +T +   ++DK GRR       +GM A   +  SI         +D       G   +V     +  F+     + +++++E  P  +KS A S++T  NWL  +++     F   + +G     YG V   C   +  +V  ++PET G SLEEIQ  +
Sbjct:  321 GILVQTFLQLTGENYFFFYGTTIFKSVGLTDGFETSIVLGTVNFFSTIIAVMVVDKIGRRKCLLFGAAGMMACMVIFASIGVKCLYPHGQDGPSSKGAGNAMIVFTCFYIFCFATTWAPVAYIVVAESFPSKVKSRAMSISTACNWLWQFLI----GFFTPFITGSIHFYYGYVFVGCLVAMFLYVFFFLPETIGLSLEEIQLLY 521          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: HXT13_YEAST (Hexose transporter HXT13 OS=Saccharomyces cerevisiae GN=HXT13 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.895e-12
Identity = 56/205 (27.32%), Postives = 92/205 (44.88%), Query Frame = -3
Query:  276 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFL-VSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIV---CAFTV-AFVSLWVPETKGRSLEEIQFSF 875
            GI +    QL+G N   FY + IF + G++     +  LG V   +T +   ++DK GRR       +GM A   +  SI         +D       G   +V     +  F+     + +++++E  P  +KS A S++T  NWL  +++     F   + +G     YG V   C   +  +V  ++PET G SLEEIQ  +
Sbjct:  321 GILVQTFLQLTGENYFFFYGTTIFKSVGLTDGFETSIVLGTVNFFSTIIAVMVVDKIGRRKCLLFGAAGMMACMVIFASIGVKCLYPHGQDGPSSKGAGNAMIVFTCFYIFCFATTWAPVAYIVVAESFPSKVKSRAMSISTACNWLWQFLI----GFFTPFITGSIHFYYGYVFVGCLVAMFLYVFFFLPETIGLSLEEIQLLY 521          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: GTR10_HUMAN (Solute carrier family 2, facilitated glucose transporter member 10 OS=Homo sapiens GN=SLC2A10 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.895e-12
Identity = 39/116 (33.62%), Postives = 65/116 (56.03%), Query Frame = -3
Query:  273 SRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMT-----ANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 605
            +R +++L   +L+ L+  V +FS G G + W+++SEI PV I+  A +     NW  +  ++++         L W    TFL+YG+     + F+ L+VPETKG+SL EI   F+
Sbjct:  402 ARGHALLRWTALLCLMVFVSAFSFGFGPVTWLVLSEIYPVEIRGRAFAFCNSFNWAANLFISLSFLDLIGTIGLSW----TFLLYGLTAVLGLGFIYLFVPETKGQSLAEIDQQFQ 513          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: RAG1_KLULA (Low-affinity glucose transporter OS=Kluyveromyces lactis GN=RAG1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.781e-12
Identity = 53/203 (26.11%), Postives = 89/203 (43.84%), Query Frame = -3
Query:  288 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFL---VSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIV----CAFTVAFVSLWVPETKGRSLEEI 875
            GI +  LQQL+G N   +Y + IF + G+  S   +  LG+V   +T    + +D  GRR        GM A + +   V +                  G   +V     +  F+     I +V++SE  P+ +K  A ++A+ +NW+  +++     F   + +      YG V      F   +V  +VPETKG +LEE+
Sbjct:  326 GIMIQSLQQLTGDNYFFYYGTTIFQSVGMDDSFETSIVLGIVNFASTFFALYTVDHFGRRNCLLYGCVGMVACYVVYASVGVTRLWPDGPDHPDISSKGAGNCMIVFACFYIFCFATTWAPIAYVVISESYPLRVKGKAMAIASASNWIWGFLI----GFFTPFITSAIHFYYGYVFMGCMVFAFFYVYFFVPETKGLTLEEV 524          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: QUTD_EMENI (Quinate permease OS=Emericella nidulans GN=qutD PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.781e-12
Identity = 57/211 (27.01%), Postives = 96/211 (45.50%), Query Frame = -3
Query:  276 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVA--TFGL-GVVQVVATGV-NTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVG-------AIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 875
            G  L + Q  SGIN + +YS  +F + G+S  N +  T G+ GVV+ V T V   +L+D  GRR       +G +   ++V       G++       +  G     G +  +  F L            PWVI SE+    ++SLA + A  +NWL +++++     +      G +  +  +   ++ FV   +PETKG  LE ++  F
Sbjct:  286 GSMLFLWQNGSGINAINYYSPRVFKSIGVSGGNTSLLTTGIFGVVKAVITFVWLLYLIDHFGRRNLLLVGAAGGSVCLWIVG------GYIKIAKPENNPEGTQLDSGGIAAIFFFYLWTAFYTPSWNGTPWVINSEMFDPTVRSLAQACAAASNWLWNFLISRFTPQMFTSMGYGVYFFFASLMILSIVFVFFLIPETKGVPLESMETLF 490          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: QAY_NEUTR (Quinate permease OS=Neurospora terricola GN=qa-y PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.781e-12
Identity = 55/204 (26.96%), Postives = 95/204 (46.57%), Query Frame = -3
Query:  276 LLVLQQLSGINGVLFYSSNIFANAGISSSNVA--TFGL-GVVQVVATGV-NTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEG---FVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 866
            L + Q  SGIN + +YS  +F + GI+ +N    T G+ GVV++V T V   WL+D  GRR       +G +   + +     + G     +ED++  S  GI ++         ++      PWVI SE+   N +SL  + A   NW  ++I++     +      G +  +  +   ++ F+  ++PETK   LE +   F
Sbjct:  292 LFLWQNGSGINAINYYSPTVFRSIGITGTNTGFLTTGIFGVVKMVLTIVWLLWLVDLVGRRRMLFIGATGGSLCMWFIGAYIKIAGPGSTKAEDAKLTS-GGIAAIFFFYLWTAFYTPSWNGTPWVINSEMFDQNTRSLGQASAAANNWFWNFIISRFTPQMFIKMEYGVYFFFASLMLLSIVFIYFFIPETKSIPLEAMDRLF 494          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: KHT2_KLULA (Hexose transporter 2 OS=Kluyveromyces lactis GN=KHT2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.781e-12
Identity = 55/205 (26.83%), Postives = 94/205 (45.85%), Query Frame = -3
Query:  285 IGLLV--LQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAAS---FFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIV---CAFTVAF-VSLWVPETKGRSLEEIQ 872
            +G+L+   QQL+G N   +Y + IF + G+  S   +  LG+V   +T V  +++DK GRR       + M A    F  V +        +         G   +V     +  F+     I +V+++E  P+ +K+   ++AT +NW+  ++      F   + +      YG V   C   + F V  +VPETKG +LEE+Q
Sbjct:  324 MGMLIQSFQQLTGNNYFFYYGTTIFNSVGMDDSFETSIVLGIVNFASTFVAIYVVDKFGRRKCLLWGAAAMTACMVVFASVGVTRLWPDGANHPETASKGAGNCMIVFACFYIFCFATSWAPIAYVVVAESYPLRVKAKCMAIATASNWIWGFL----NGFFTPFITSAIHFYYGYVFMGCLVAMFFYVFFFVPETKGLTLEEVQ 524          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: INT4_ARATH (Inositol transporter 4 OS=Arabidopsis thaliana GN=INT4 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.938e-12
Identity = 36/104 (34.62%), Postives = 61/104 (58.65%), Query Frame = -3
Query:  285 SILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLD-WSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQ 593
            S  G L++V L   ++ ++ G+G +PW++ SEI P+  + L G +A ++NW+ + IV+ +   L     S GTFL++       + F+ L VPETKG   EE++
Sbjct:  454 SKFGFLAIVFLGLYIVVYAPGMGTVPWIVNSEIYPLRYRGLGGGIAAVSNWVSNLIVSESFLSLTHALGSSGTFLLFAGFSTIGLFFIWLLVPETKGLQFEEVE 557          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: GTR12_MOUSE (Solute carrier family 2, facilitated glucose transporter member 12 OS=Mus musculus GN=Slc2a12 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.938e-12
Identity = 38/98 (38.78%), Postives = 62/98 (63.27%), Query Frame = -3
Query:  288 LSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDW-SSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 578
            LSL  L+  V +FS+G+G +PW+++SEI P  I+  A ++ +  NW V+ ++++T   + D         IY I+   ++AFV L++PETKG SLE+I
Sbjct:  468 LSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGVNLLISLTFLTVTDLIGLSWVCFIYTIMSLASLAFVVLFIPETKGCSLEQI 565          
The following BLAST results are available for this feature:
BLAST of CF835376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
YIR0_YEAST2.895e-1226.47Putative transporter-like protein YIL170W OS=Sacch... [more]
HXT17_YEAST2.895e-1227.32Hexose transporter HXT17 OS=Saccharomyces cerevisi... [more]
HXT13_YEAST2.895e-1227.32Hexose transporter HXT13 OS=Saccharomyces cerevisi... [more]
GTR10_HUMAN2.895e-1233.62Solute carrier family 2, facilitated glucose trans... [more]
RAG1_KLULA3.781e-1226.11Low-affinity glucose transporter OS=Kluyveromyces ... [more]
QUTD_EMENI3.781e-1227.01Quinate permease OS=Emericella nidulans GN=qutD PE... [more]
QAY_NEUTR3.781e-1226.96Quinate permease OS=Neurospora terricola GN=qa-y P... [more]
KHT2_KLULA3.781e-1226.83Hexose transporter 2 OS=Kluyveromyces lactis GN=KH... [more]
INT4_ARATH4.938e-1234.62Inositol transporter 4 OS=Arabidopsis thaliana GN=... [more]
GTR12_MOUSE4.938e-1238.78Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C07_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835376 ID=CF835376; Name=CF835376; organism=Citrus sinensis; type=EST; length=877bp
TTTTTTTTTTTTTTTCCCAAAACTGGAGATAATTATTTACTACCCCTTAA
TGTTCCAGTGAAAAAGAGTAATTTATCCATTGCCCTTTCCTTTTCCCCTT
CAACAACACCACAAAGCAACTGTCGTAGACCGCCCCTACAGATGATACAA
TGAACTATGGAGCAATGATGGAAGCAATTCGCACAAATAAAAGCGCATTG
ACATATACTTGGGAAGGATTAGGACACATGGGTGGAGAAGCTCTTTATTA
CAAATGCAAGCCAACAATTTTATCTGAAGGAAAACTGAATTTCTTCCAGA
CTTCTTCCTTTGGTTTCAGGAACCCAGAGAGACACAAAAGCAACAGTGAA
AGCACACACTATCCCGTATATCAAGAAGGTGCCTCCACTGCTCCAATCTA
ACAGAAAATTTGCAGTCATTGTGACAATCCACGATACCAGCCAGTTTGCC
AACGTTGCAACACTGCCAGCAAGGCTCTTGATATTCACTGGAAGTATCTC
GGACATTATAACCCAAGGAATAGCTCCAACTCCCAAAGAGAATGAAATCA
CTACAGTCACAAGACCGACAAGCGACAATATCCCCAATATGCTATAAAAG
CGAGAATCTTCTGACACAAAACCCTCCAAAAAGAATGCAATCGAAACAAG
GAAAAAACTAGCAGCCATTCCAGATGATGATATTAAAAGAAGAAGCCTGC
GGCCAGCTTTGTCCATCAACCATGTATTGACCCCAGTGGCAACAACCTGA
ACAACCCCAAGTCCAAATGTAGCAACGTTACTTGATGAAATCCCAGCGTT
AGCAAAAATGTTACTGGAATAGAATAAAACACCATTGATGCCACTGAGTT
GCTGAAGAACCAGTAATCCTATTCCTA
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