CF835376

Overview
NameCF835376
Unique NameCF835376
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:941..1817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: HUP2_CHLKE (H(+)/hexose cotransporter 2 OS=Chlorella kessleri GN=HUP2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.201e-11
Identity = 52/199 (26.13%), Postives = 92/199 (46.23%), Query Frame = -3
Query:  276 LLVLQQLSGINGVLFYSSNIFANAGIS--SSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 866
            + +LQQL+GIN ++FY   +F++ G +  ++ + T  +G V V AT V+ + +DK GRR         M     + +    +E      +   S      LV +   V +F+   G + W++ SEI  +  +    S+A + N+L S+++      ++     G FL +         FV   +PETKG  +E +   F
Sbjct:  297 IAMLQQLTGINAIMFYVPVLFSSFGTARHAALLNTVIIGAVNVAATFVSIFSVDKFGRRGLFLEGGIQMFIGQVVTAAVLGVE-LNKYGTNLPSSTAAGVLVVICVYVAAFAWSWGPLGWLVPSEIQTLETRGAGMSMAVIVNFLFSFVIGQAFLSMMCAMRWGVFLFFAGWVVIMTFFVYFCLPETKGVPVETVPTMF 494          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: GHT5_SCHPO (High-affinity glucose transporter ght5 OS=Schizosaccharomyces pombe GN=ght5 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.201e-11
Identity = 52/199 (26.13%), Postives = 92/199 (46.23%), Query Frame = -3
Query:  288 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFL---LDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 875
            G+G++ LQQL+G N   +Y   +F   G++S  ++   L  V    T    ++++  GRR          + +FF+ + A        ++       G + +V     + SF+   G   +VI+ E  P+  +S   +VAT  NWL  ++++    F+   + +  G  F    + CA  + F  L+  ETKG +LEEI
Sbjct:  269 GLGVMSLQQLTGDNYYFYYGFEVFEGTGMNSPYLSALILDAVNFGCTFGGLFVLEFFGRRMPLIIGALWQSITFFIYA-AVGNRALTRKNGTSNHRAGAVMIVFSCLFIFSFAQTWGPAAYVIVGESYPIRYRSKCAAVATTGNWLWGFLISFFTPFITNSIGFKYGYIFAACNL-CAACIIF--LFAHETKGLTLEEI 463          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: STP5_ARATH (Sugar transport protein 5 OS=Arabidopsis thaliana GN=STP5 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.180e-11
Identity = 50/185 (27.03%), Postives = 83/185 (44.86%), Query Frame = -3
Query:  306 QQLSGINGVLFYSSNIFANAGISSSN--VATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKG 854
            QQL+GI    FY+  +F + G  S    +ATF LG V + +  ++T ++D+ GRR         M      V++   +    + D        +  +V L      F    G + W++ SEI P+ I+    S++   N+  ++ ++ T    L     G FL YG        FV +++PETKG
Sbjct:  297 QQLTGITVNAFYAPVLFRSVGFGSGPALIATFILGFVNLGSLLLSTMVIDRFGRRFLFIAGGILMLLCQIAVAVLLAVTVGATGDGEMKKGYAVTVVVLLCIYAAGFGWSWGPLSWLVPSEIFPLKIRPAGQSLSVAVNFAATFALSQTFLATLCDFKYGAFLFYGGWIFTMTIFVIMFLPETKG 481          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: HGT1_CANAL (High-affinity glucose transporter OS=Candida albicans GN=HGT1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.460e-11
Identity = 60/209 (28.71%), Postives = 96/209 (45.93%), Query Frame = -3
Query:  288 VLQQLSGINGVLFYSSNIFANAGISSSN--VATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGF---------------VSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVN-IKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 860
            + QQL+G+N +++Y   IF  AG S ++  VA+    V+    T    + +DK GRR       + M A  F   +A  L  +               + ED++  S  G ++   L     +F+ GVG   WV  +EI   N +     +++T ANW++++ + M         S  T++IYG+ C      V    PETKG+ LEEI
Sbjct:  287 IWQQLTGMNVMMYYIVYIFQMAGYSGNSNLVASSIQYVINTCVTVPALYFIDKVGRRPLLIGGATMMMA--FQFGLAGILGQYSIPWPDSGNDSVNIRIPEDNKSAS-KGAIACCYLFVASFAFTWGVGI--WVYCAEIWGDNRVAQRGNAISTSANWILNFAIAMYTPTGFKNISWKTYIIYGVFCFAMATHVYFGFPETKGKRLEEI 490          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: GTR12_BOVIN (Solute carrier family 2, facilitated glucose transporter member 12 OS=Bos taurus GN=SLC2A12 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.460e-11
Identity = 36/111 (32.43%), Postives = 67/111 (60.36%), Query Frame = -3
Query:  288 VSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDW-SSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 617
            V++ +   + L  LSL  L+  V +FS+G+G +PW+++SEI P  I+  A ++ +  NW ++ ++++T   + D         IY ++   ++ FV +++PETKG SLE+I
Sbjct:  454 VTDSADVPTFLKWLSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGINLLISLTFLTVTDLIGLPWVCFIYTVMSLASLVFVIVFIPETKGCSLEQI 564          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: YFE0_YEAST (Probable metabolite transport protein YFL040W OS=Saccharomyces cerevisiae GN=YFL040W PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.131e-11
Identity = 55/213 (25.82%), Postives = 96/213 (45.07%), Query Frame = -3
Query:  276 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGV---VQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSED-----SRFYSI-----LGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 875
            G+ L +L Q SGIN +L Y + I    G+   NV  F   +   + +V + +    +D   R+         ++     +   F   G  ++      S  +SI     +G   L     +V  F++ + +IPWV  +E+LP  +K    ++     WL ++I+T     +++   G TF+I+G +       V +W PETKG S+E+I   F
Sbjct:  279 GMTLQLLVQFSGINIILGYITYICEIVGLEG-NVKLFTSSIPYFINMVLSLLPITFIDYTSRKLITLLGGFPISGLLITIGALFVKYGQDTKPIDGNRSLVWSIGENPFVGGWILTLCFLIVGIFAMSLSSIPWVYTNEMLPSRVKVKGFAICVTFGWLGNFILTFLCPVMIERLKGTTFIIFGSLTFLISLSVLIWFPETKGMSIEDIDKFF 490          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: VPS73_YEAST (Vacuolar protein sorting-associated protein 73 OS=Saccharomyces cerevisiae GN=VPS73 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.131e-11
Identity = 49/186 (26.34%), Postives = 88/186 (47.31%), Query Frame = -3
Query:  309 LLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETK 866
            LL  QQ  GIN ++ Y + I +      +    F + +V V+ T + + L+    R+         +  S  LVS+  F+ G     ++  ++L + S + +      F++G+  +P++IM E+       LA    T+ NW+ ++I+  T   + D  SG  F+I+ I+     AF+   VPETK
Sbjct:  310 LLFGQQFCGINSIVLYGTKIISQLYPQHAIRINFFISMVNVLVTILVSLLIHSLPRKPL-------LMTSTVLVSVTAFIMGIAMNHNKM-NLLIVFSFIYMGV----FTMGLNPLPFIIMREVSKPQDMVLAQRYGTICNWVGTFIIAYTFPIIHDVLSGYVFIIFAIIACSISAFIWKKVPETK 483          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: HXT14_YEAST (Hexose transporter HXT14 OS=Saccharomyces cerevisiae GN=HXT14 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.131e-11
Identity = 40/200 (20.00%), Postives = 97/200 (48.50%), Query Frame = -3
Query:  276 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 875
            G+ ++  QQLSGIN   +Y +++F   GI    + +  L  V  ++T +  + ++K G +       + +   F++++ A      V    R      I+ ++     +  F++ +G + +V++SE+ P+  ++++ ++ T  NW+ ++++++    ++         I+       + F  + VPET+ ++ +EI   F
Sbjct:  345 GMMIMAFQQLSGINYFFYYGTSVFKGVGIKDPYITSIILSSVNFLSTILGIYYVEKWGHKTCLLYGSTNLL--FYMMTYA-----TVGTFGRETDFSNIVLIIVTCCFIFWFAITLGPVTFVLVSELFPLRTRAISMAICTFINWMFNFLISLLTPMIVSKIDFKLGYIFAACLLALIIFSWILVPETRKKNEQEINKIF 537          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: GTR12_MACFA (Solute carrier family 2, facilitated glucose transporter member 12 OS=Macaca fascicularis GN=SLC2A12 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.131e-11
Identity = 35/98 (35.71%), Postives = 61/98 (62.24%), Query Frame = -3
Query:  288 LSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDW-SSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 578
            LSL  L+  V +FS+G+G +PW+++SEI P  I+  A ++ +  NW ++ ++++T   + D         IY I+   ++ FV +++PETKG SLE+I
Sbjct:  467 LSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGINLLISLTFLTVTDLIGLPWVCFIYTIMSLASLLFVVMFIPETKGCSLEQI 564          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: GTR12_HUMAN (Solute carrier family 2, facilitated glucose transporter member 12 OS=Homo sapiens GN=SLC2A12 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.131e-11
Identity = 35/98 (35.71%), Postives = 61/98 (62.24%), Query Frame = -3
Query:  288 LSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDW-SSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 578
            LSL  L+  V +FS+G+G +PW+++SEI P  I+  A ++ +  NW ++ ++++T   + D         IY I+   ++ FV +++PETKG SLE+I
Sbjct:  463 LSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGINLLISLTFLTVTDLIGLPWVCFIYTIMSLASLLFVVMFIPETKGCSLEQI 560          
The following BLAST results are available for this feature:
BLAST of CF835376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
HUP2_CHLKE3.201e-1126.13H(+)/hexose cotransporter 2 OS=Chlorella kessleri ... [more]
GHT5_SCHPO3.201e-1126.13High-affinity glucose transporter ght5 OS=Schizosa... [more]
STP5_ARATH4.180e-1127.03Sugar transport protein 5 OS=Arabidopsis thaliana ... [more]
HGT1_CANAL5.460e-1128.71High-affinity glucose transporter OS=Candida albic... [more]
GTR12_BOVIN5.460e-1132.43Solute carrier family 2, facilitated glucose trans... [more]
YFE0_YEAST7.131e-1125.82Probable metabolite transport protein YFL040W OS=S... [more]
VPS73_YEAST7.131e-1126.34Vacuolar protein sorting-associated protein 73 OS=... [more]
HXT14_YEAST7.131e-1120.00Hexose transporter HXT14 OS=Saccharomyces cerevisi... [more]
GTR12_MACFA7.131e-1135.71Solute carrier family 2, facilitated glucose trans... [more]
GTR12_HUMAN7.131e-1135.71Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C07_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835376 ID=CF835376; Name=CF835376; organism=Citrus sinensis; type=EST; length=877bp
TTTTTTTTTTTTTTTCCCAAAACTGGAGATAATTATTTACTACCCCTTAA
TGTTCCAGTGAAAAAGAGTAATTTATCCATTGCCCTTTCCTTTTCCCCTT
CAACAACACCACAAAGCAACTGTCGTAGACCGCCCCTACAGATGATACAA
TGAACTATGGAGCAATGATGGAAGCAATTCGCACAAATAAAAGCGCATTG
ACATATACTTGGGAAGGATTAGGACACATGGGTGGAGAAGCTCTTTATTA
CAAATGCAAGCCAACAATTTTATCTGAAGGAAAACTGAATTTCTTCCAGA
CTTCTTCCTTTGGTTTCAGGAACCCAGAGAGACACAAAAGCAACAGTGAA
AGCACACACTATCCCGTATATCAAGAAGGTGCCTCCACTGCTCCAATCTA
ACAGAAAATTTGCAGTCATTGTGACAATCCACGATACCAGCCAGTTTGCC
AACGTTGCAACACTGCCAGCAAGGCTCTTGATATTCACTGGAAGTATCTC
GGACATTATAACCCAAGGAATAGCTCCAACTCCCAAAGAGAATGAAATCA
CTACAGTCACAAGACCGACAAGCGACAATATCCCCAATATGCTATAAAAG
CGAGAATCTTCTGACACAAAACCCTCCAAAAAGAATGCAATCGAAACAAG
GAAAAAACTAGCAGCCATTCCAGATGATGATATTAAAAGAAGAAGCCTGC
GGCCAGCTTTGTCCATCAACCATGTATTGACCCCAGTGGCAACAACCTGA
ACAACCCCAAGTCCAAATGTAGCAACGTTACTTGATGAAATCCCAGCGTT
AGCAAAAATGTTACTGGAATAGAATAAAACACCATTGATGCCACTGAGTT
GCTGAAGAACCAGTAATCCTATTCCTA
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