CF835376

Overview
NameCF835376
Unique NameCF835376
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:941..1817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: PLT4_ARATH (Probable polyol transporter 4 OS=Arabidopsis thaliana GN=PLT4 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.030e-22
Identity = 67/206 (32.52%), Postives = 107/206 (51.94%), Query Frame = -3
Query:  273 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSN---VATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGI-LSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMT-ANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 875
            G G+   QQ++GI+  ++YS  I   AGI        AT  +GV + V     T+L+D  GR+        GM    F +S      G           LGI L+L+ +   V  FS+G+G + WV+ SEI P+ +++ A ++  + N + S +V M+  +     + GGTF ++ +V A +V FV + VPET G+SLE+I+  F+
Sbjct:  304 GFGIQCFQQITGIDATVYYSPEILKEAGIQDETKLLAATVAVGVTKTVFILFATFLIDSVGRKPLLYVSTIGMTLCLFCLSFTLTFLG--------QGTLGITLALLFVCGNVAFFSIGMGPVCWVLTSEIFPLRLRAQASALGAVGNRVCSGLVAMSFLSVSRAITVGGTFFVFSLVSALSVIFVYVLVPETSGKSLEQIELMFQ 501          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: GTR3_PONAB (Solute carrier family 2, facilitated glucose transporter member 3 OS=Pongo abelii GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.979e-22
Identity = 65/200 (32.50%), Postives = 107/200 (53.50%), Query Frame = -3
Query:  276 IGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIY-GIVCAFTVAFVSLWVPETKGRSLEEIQFSF 872
            I L + QQLSGIN V +YS+ IF +AG+     AT G GVV  + T V+ +L+++AGRR        GMA    L++++  L+         Y+ +  + +  ++  V  F +G G IPW I++E+     +  A +VA  +NW  +++V +       +     F+I+ G +  F +AF    VPET+GR+ E+I  +F
Sbjct:  274 IVLQLSQQLSGINAVFYYSTGIFKDAGVQEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKD-------NYNGMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAHYLGAYVFIIFTGFLITF-LAFTFFKVPETRGRTFEDITRAF 465          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: GTR3_HUMAN (Solute carrier family 2, facilitated glucose transporter member 3 OS=Homo sapiens GN=SLC2A3 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.979e-22
Identity = 65/200 (32.50%), Postives = 107/200 (53.50%), Query Frame = -3
Query:  276 IGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIY-GIVCAFTVAFVSLWVPETKGRSLEEIQFSF 872
            I L + QQLSGIN V +YS+ IF +AG+     AT G GVV  + T V+ +L+++AGRR        GMA    L++++  L+         Y+ +  + +  ++  V  F +G G IPW I++E+     +  A +VA  +NW  +++V +       +     F+I+ G +  F +AF    VPET+GR+ E+I  +F
Sbjct:  274 IVLQLSQQLSGINAVFYYSTGIFKDAGVQEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKD-------NYNGMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAHYLGAYVFIIFTGFLITF-LAFTFFKVPETRGRTFEDITRAF 465          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: GTR3_RABIT (Solute carrier family 2, facilitated glucose transporter member 3 (Fragment) OS=Oryctolagus cuniculus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.532e-21
Identity = 60/199 (30.15%), Postives = 103/199 (51.76%), Query Frame = -3
Query:  276 IGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 872
            I L + QQLSGIN V +YS+ IF +AG+     AT G GVV  + T V+ +L+++AGRR        GMA    L++++  L+         Y  + ++ +  ++     F +G G IPW+I++ +   + +  A +VA  +NW  +++V +       +     F+I+ +       F    VPET+GR+ E+I  +F
Sbjct:  179 IVLQLSQQLSGINAVFYYSTGIFKDAGVREPIYATIGAGVVNTIFTIVSVFLVERAGRRTLHLIGLGGMALCSVLMTVSLLLK-------XKYDTMSLVCIAAILIYAAFFEIGPGPIPWLIVTGLFSQDPRPAAMAVAGCSNWTSNFLVGLLFPSAAYYLGAYVFVIFAVFLVAFFIFTFFKVPETRGRTFEDITRAF 370          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: XYLL1_ARATH (D-xylose-proton symporter-like 1 OS=Arabidopsis thaliana GN=At3g03090 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.412e-21
Identity = 64/199 (32.16%), Postives = 109/199 (54.77%), Query Frame = -3
Query:  285 GLLVLQQLSGINGVLFYSSNIFANAGISSSNVAT---FGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGG-TFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQ 869
            GL++ QQ++G   VL+Y+ +I   AG S++  AT     LG++++V TGV+  ++D+ GRR       SGM  S FL+   +           FY  +  +++  L+  V  + L  G I W+++SEI P+ ++    S+A L N+  + +VT   + L +    G  F  +G++C  ++ F+   VPETKG +LEEI+
Sbjct:  311 GLVLFQQITGQPSVLYYAPSILQTAGFSAAADATRISILLGLLKLVMTGVSVIVIDRVGRRPLLLCGVSGMVISLFLLGSYYM----------FYKNVPAVAVAALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGISLAVLVNFGANALVTFAFSPLKELLGAGILFCAFGVICVVSLFFIYYIVPETKGLTLEEIE 499          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: PLT2_ARATH (Putative polyol transporter 2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.456e-21
Identity = 69/203 (33.99%), Postives = 105/203 (51.72%), Query Frame = -3
Query:  276 IGLLVLQQLSGINGVLFYSSNIFANAGISSSN---VATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMT-ANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 872
            +G+   QQ SGI+ V+ YS  IF+ AG+ S N   +AT  +GVV+ +   V T L+D+ GRR        GM   F L ++   L        +       L++  ++T V +FSLG G + WV  SEI PV +++   S+  + N L+S I+ MT  +     + GG FL++  V      F   ++PET+G  LEEI+  F
Sbjct:  289 LGIHFSQQASGIDAVVLYSPTIFSRAGLKSKNDQLLATVAVGVVKTLFIVVGTCLVDRFGRRALLLTSMGGMF--FSLTALGTSLTVIDRNPGQTLKWAIGLAVTTVMTFVATFSLGAGPVTWVYASEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAVAAWVFFFTFLPETRGVPLEEIESLF 489          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: YFIG_BACSU (Putative metabolite transport protein yfiG OS=Bacillus subtilis GN=yfiG PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.820e-21
Identity = 59/206 (28.64%), Postives = 105/206 (50.97%), Query Frame = -3
Query:  273 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSN--VATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSI-AFFLEGFVSEDSRFYSILGILSLVGLVTVVISFS-LGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDW-SSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 875
            GIG+ ++QQ++G+N +++Y + I   AG  +    +     GV+ V+A     WL+ K  RR        G   +  L+ I +  LEG  +     Y +L       L  + ++F    +  + W+++SEI P++++ L   ++T   W  ++++  T   LL+      TF I+  +    + FV  +VPETKGRSLE+++ SFR
Sbjct:  268 GIGIAIVQQITGVNSIMYYGTEILREAGFQTEAALIGNIANGVISVIAVIFGIWLLGKVRRRPMLIIGQIGTMTALLLIGILSIVLEGTPALP---YVVLS------LTILFLAFQQTAISTVTWLMLSEIFPMHVRGLGMGISTFCLWTANFLIGFTFPILLNHIGMSATFFIFVAMNILAILFVKKYVPETKGRSLEQLEHSFR 464          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: PLST1_ARATH (Probable plastidic glucose transporter 1 OS=Arabidopsis thaliana GN=At1g05030 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 7.601e-21
Identity = 68/203 (33.50%), Postives = 104/203 (51.23%), Query Frame = -3
Query:  279 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLD----WSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFS 875
            G  L VLQQ +GINGVL++SS  F N GI+S   A+  +GV         ++L+DK GR+        GMA S FL+  A    GF  ++    S    LS++G +  + SF++G G +  +I+ E+     +      +   +W+ +++V +   F LD    +  G  +  +G V     AF  L+  ETKGRSLEEI+ S
Sbjct:  324 GGSLFVLQQFAGINGVLYFSSLTFQNVGITSGAQASLYVGVTNFAGALCASYLIDKQGRKKLLIGSYLGMAVSMFLIVYAV---GFPLDEDLSQS----LSILGTLMYIFSFAIGAGPVTGLIIPELSSNRTRGKIMGFSFSVHWVSNFLVGL---FFLDLVEKYGVGTVYASFGSVSLLAAAFSHLFTVETKGRSLEEIELS 516          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: GTR14_HUMAN (Solute carrier family 2, facilitated glucose transporter member 14 OS=Homo sapiens GN=SLC2A14 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.601e-21
Identity = 63/200 (31.50%), Postives = 106/200 (53.00%), Query Frame = -3
Query:  276 IGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIY-GIVCAFTVAFVSLWVPETKGRSLEEIQFSF 872
            I L + QQLSGIN V +YS+ IF +AG+     AT   GVV  + T ++ +L+++AGRR        GMA    L++++  L+         Y+ +  + +  ++  V  F +G G IPW I++E+     +  A +VA  +NW  +++V +       +     F+I+ G +  F +AF    VPET+GR+ E+I  +F
Sbjct:  298 IVLQLSQQLSGINAVFYYSTGIFKDAGVQQPIYATISAGVVNTIFTLLSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLK-------NHYNGMSFVCIGAILVFVACFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAYYLGAYVFIIFTGFLITF-LAFTFFKVPETRGRTFEDITRAF 489          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: PLT1_ARATH (Putative polyol transporter 1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.296e-20
Identity = 66/203 (32.51%), Postives = 108/203 (53.20%), Query Frame = -3
Query:  276 IGLLVLQQLSGINGVLFYSSNIFANAGISSSN---VATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMT-ANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 872
            +G+   QQ SGI+ V+ YS  IF+ AG+ S N   +AT  +GVV+ +   V T ++D+ GRR        GM  S   +  +  +       +  ++I   L++  ++T V +FS+G G + WV  SEI PV +++   S+  + N L+S I+ MT  +     + GG FL++  V A    F   ++PET+G  LEE++  F
Sbjct:  289 LGIHFAQQASGIDAVVLYSPTIFSKAGLKSKNDQLLATVAVGVVKTLFIVVGTCVVDRFGRRALLLTSMGGMFLSLTALGTSLTVINRNPGQTLKWAIG--LAVTTVMTFVATFSIGAGPVTWVYCSEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAAAAWVFFFTFLPETRGIPLEEMETLF 489          
The following BLAST results are available for this feature:
BLAST of CF835376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
PLT4_ARATH4.030e-2232.52Probable polyol transporter 4 OS=Arabidopsis thali... [more]
GTR3_PONAB8.979e-2232.50Solute carrier family 2, facilitated glucose trans... [more]
GTR3_HUMAN8.979e-2232.50Solute carrier family 2, facilitated glucose trans... [more]
GTR3_RABIT1.532e-2130.15Solute carrier family 2, facilitated glucose trans... [more]
XYLL1_ARATH3.412e-2132.16D-xylose-proton symporter-like 1 OS=Arabidopsis th... [more]
PLT2_ARATH4.456e-2133.99Putative polyol transporter 2 OS=Arabidopsis thali... [more]
YFIG_BACSU5.820e-2128.64Putative metabolite transport protein yfiG OS=Baci... [more]
PLST1_ARATH7.601e-2133.50Probable plastidic glucose transporter 1 OS=Arabid... [more]
GTR14_HUMAN7.601e-2131.50Solute carrier family 2, facilitated glucose trans... [more]
PLT1_ARATH1.296e-2032.51Putative polyol transporter 1 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C07_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835376 ID=CF835376; Name=CF835376; organism=Citrus sinensis; type=EST; length=877bp
TTTTTTTTTTTTTTTCCCAAAACTGGAGATAATTATTTACTACCCCTTAA
TGTTCCAGTGAAAAAGAGTAATTTATCCATTGCCCTTTCCTTTTCCCCTT
CAACAACACCACAAAGCAACTGTCGTAGACCGCCCCTACAGATGATACAA
TGAACTATGGAGCAATGATGGAAGCAATTCGCACAAATAAAAGCGCATTG
ACATATACTTGGGAAGGATTAGGACACATGGGTGGAGAAGCTCTTTATTA
CAAATGCAAGCCAACAATTTTATCTGAAGGAAAACTGAATTTCTTCCAGA
CTTCTTCCTTTGGTTTCAGGAACCCAGAGAGACACAAAAGCAACAGTGAA
AGCACACACTATCCCGTATATCAAGAAGGTGCCTCCACTGCTCCAATCTA
ACAGAAAATTTGCAGTCATTGTGACAATCCACGATACCAGCCAGTTTGCC
AACGTTGCAACACTGCCAGCAAGGCTCTTGATATTCACTGGAAGTATCTC
GGACATTATAACCCAAGGAATAGCTCCAACTCCCAAAGAGAATGAAATCA
CTACAGTCACAAGACCGACAAGCGACAATATCCCCAATATGCTATAAAAG
CGAGAATCTTCTGACACAAAACCCTCCAAAAAGAATGCAATCGAAACAAG
GAAAAAACTAGCAGCCATTCCAGATGATGATATTAAAAGAAGAAGCCTGC
GGCCAGCTTTGTCCATCAACCATGTATTGACCCCAGTGGCAACAACCTGA
ACAACCCCAAGTCCAAATGTAGCAACGTTACTTGATGAAATCCCAGCGTT
AGCAAAAATGTTACTGGAATAGAATAAAACACCATTGATGCCACTGAGTT
GCTGAAGAACCAGTAATCCTATTCCTA
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