CF835377

Overview
NameCF835377
Unique NameCF835377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:1..771. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: STP11_ARATH (Sugar transport protein 11 OS=Arabidopsis thaliana GN=STP11 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.336e-15
Identity = 44/144 (30.56%), Postives = 81/144 (56.25%), Query Frame = 1
Query:  346 SIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF-------VNWRVLAVLGVLPCTLLIPGLFFIPESP 756
            ++F S   + A+  +  +  I    GRK S++I ++  + G L+   + +   L +GRL  G GVG  + +VP+Y++E+AP  +RG+L    QL++TIGI+ A ++          + WR+   L  +P  +++ G FF+P++P
Sbjct:   85 TLFTSSLYLAALFASFLASTITRLFGRKVSMVIGSLAFLSGALLNGLAINLEMLIIGRLFLGVGVGFANQSVPLYLSEMAPAKIRGALNIGFQLAITIGILAANIVNYVTPKLQNGIGWRLSLGLAGVPAVMMLVGCFFLPDTP 228          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: HUP1_CHLKE (H(+)/hexose cotransporter 1 OS=Chlorella kessleri GN=HUP1 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.336e-15
Identity = 51/150 (34.00%), Postives = 81/150 (54.00%), Query Frame = 1
Query:  337 SEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            ++  +F S   +  +V  + +  I    GRK ++ I     + G L+ +F++D + L +GR+L GFGVG+ S  VP Y++E+AP + RG L    QL VTIGI++A L+   V      WR+       P  +L  G   +PESP +L +
Sbjct:   84 AKLQLFVSSLFLAGLVSCLFASWITRNWGRKVTMGIGGAFFVAGGLVNAFAQDMAMLIVGRVLLGFGVGLGSQVVPQYLSEVAPFSHRGMLNIGYQLFVTIGILIAGLVNYAVRDWENGWRLSLGPAAAPGAILFLGSLVLPESPNFLVE 233          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR5_MOUSE (Solute carrier family 2, facilitated glucose transporter member 5 OS=Mus musculus GN=Slc2a5 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.336e-15
Identity = 54/162 (33.33%), Postives = 89/162 (54.94%), Query Frame = 1
Query:  307 EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV------NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            E I    LT+  +S+  S+   G  + ++  G +   +G+K +L+   + +I+  + +  S+ +     + + RLL G   G+ S  VP+Y+ E+AP+N+RG+LG V QL +T+GI++A L GL         W VL  L  +P  L +  L F PESPR+L
Sbjct:   59 ENIESFTLTLL-WSLTVSMFPFGGFISSLVVGNLVNKLGKKRALLFNNIFSILPAIFMGCSQIAQSFELIIISRLLVGICAGISSNVVPMYLGELAPKNLRGALGVVPQLFITVGILVAQLFGLRSLLANEDGWPVLLGLTGVPAGLQLLLLPFFPESPRYL 219          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR1_LEIDO (Membrane transporter D1 OS=Leishmania donovani PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.336e-15
Identity = 54/183 (29.51%), Postives = 95/183 (51.91%), Query Frame = 1
Query:  250 ALGPIQFGFTCGYSSPTQAEIISDLKLTIS--EFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLA----YLLGLF----VNWRVLAVLGVLPCTL-LIPGLFFIPESPRWL 765
            ALG   FG+  G  +    ++      +    ++++  ++A  GA VGA  SG I+   GR+  + +A    +IG +++  + +   + + R++ G  +G+ S T+PVY+AE+     RG+   +N L +T G  +A     ++ +F    + WRV   +G LP  +     LFF+PESPRWL
Sbjct:   10 ALGGFLFGYDTGVINAALFQMKDHFGFSEHSWQYALIVAIAIAGAFVGAFISGFISAAFGRRPCIAVADALFVIGSVLMGAAPNVEVVLVSRVIVGLAIGISSATIPVYLAEVTSPKHRGATIVLNNLFLTGGQFVAAGFTAIMVVFTSKNIGWRVAIGIGALPAVVQAFCLLFFLPESPRWL 192          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR1_HUMAN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Homo sapiens GN=SLC2A1 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.336e-15
Identity = 56/194 (28.87%), Postives = 100/194 (51.55%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEII-------------SDLKLTISE-FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK---DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV------NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            LG +QFG+  G  +  Q  I              S L  T++  +S+  ++ +VG M+G+ + G      GR+ S+++  +   +  +++ FSK       L +GR + G   G+ +  VP+Y+ E++P  +RG+LG+++QL + +GI++A + GL         W +L  +  +P  L    L F PESPR+L
Sbjct:   21 LGSLQFGYNTGVINAPQKVIEEFYNQTWVHRYGESILPTTLTTLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNKDLWPLLLSIIFIPALLQCIVLPFCPESPRFL 214          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR1_CHICK (Solute carrier family 2, facilitated glucose transporter member 1 OS=Gallus gallus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.336e-15
Identity = 57/195 (29.23%), Postives = 101/195 (51.79%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEI---------------ISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDS---SFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV------NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            LG +QFG+  G  +  Q  I               IS   LT + +S+  ++ +VG M+G+ + G      GR+ S++++ +   +  +++ FSK +     L +GR + G   G+ +  VP+Y+ E++P  +RG+LG+ +QL + +GI++A + GL +       W +L     +P  L    L F PESPR+L
Sbjct:   20 LGSLQFGYNTGVINRPQKVIEDFYNHTWLYRYEEPISPATLT-TLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMSNILAFLAAVLMGFSKMALSFEMLILGRFIIGLYSGLTTGFVPMYVGEVSPTALRGALGTFHQLGIVLGILIAQVFGLDLIMGNDSLWPLLLGFIFVPALLQCIILPFAPESPRFL 213          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: YIR0_YEAST (Putative transporter-like protein YIL170W OS=Saccharomyces cerevisiae GN=YIL170W PE=5 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.745e-15
Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = 1
Query:  358 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSF-LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            S+ N+G  +G I   ++ +  GR+  L+      ++G LI   S +  +  F+GR++ G GVG I+   P+ I+E+AP+++RG+L  + QL  T+GI L Y              WRV   L     T ++ G+ F+PESPR+L
Sbjct:    6 SIFNIGCAIGGIVLSKVGDIYGRRIGLITVTAIYVVGILIQITSINKWYQYFIGRIISGIGVGGIAVLSPMLISEVAPKHIRGTLVQLYQLMGTMGIFLGYCTNYGTKNYHNATQWRVGLGLCFAWATFMVSGMMFVPESPRYL 149          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: HXT9_YEAST (Hexose transporter HXT9 OS=Saccharomyces cerevisiae GN=HXT9 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.745e-15
Identity = 48/144 (33.33%), Postives = 77/144 (53.47%), Query Frame = 1
Query:  358 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSF-LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            S+ N+G  +G I   ++ +  GR+  L+      ++G LI   S +  +  F+GR++ G GVG I+   P+ I+E+AP+ +RG+L  + QL  T+GI L Y              WRV   L     T ++ G+ F+PESPR+L
Sbjct:  116 SIFNIGCAIGGIVLSKVGDIYGRRIGLITVTAIYVVGILIQITSINKWYQYFIGRIISGLGVGGIAVLSPMLISEVAPKQIRGTLVQLYQLMCTMGIFLGYCTNYGTKNYHNATQWRVGLGLCFAWTTFMVSGMMFVPESPRYL 259          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: HXT11_YEAST (Hexose transporter HXT11 OS=Saccharomyces cerevisiae GN=HXT11 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.745e-15
Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = 1
Query:  358 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSF-LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            S+ N+G  +G I   ++ +  GR+  L+      ++G LI   S +  +  F+GR++ G GVG I+   P+ I+E+AP+++RG+L  + QL  T+GI L Y              WRV   L     T ++ G+ F+PESPR+L
Sbjct:  116 SIFNIGCAIGGIVLSKVGDIYGRRIGLITVTAIYVVGILIQITSINKWYQYFIGRIISGLGVGGIAVLSPMLISEVAPKHIRGTLVQLYQLMGTMGIFLGYCTNYGTKNYHNATQWRVGLGLCFAWATFMVSGMMFVPESPRYL 259          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR1_RAT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Rattus norvegicus GN=Slc2a1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.745e-15
Identity = 56/195 (28.72%), Postives = 99/195 (50.77%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQ---------------AEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK---DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            LG +QFG+  G  +  Q                E I    LT + +S+  ++ +VG M+G+ + G      GR+ S+++  +   +  +++ FSK       L +GR + G   G+ +  VP+Y+ E++P  +RG+LG+++QL + +GI++A + GL         W +L  +  +P  L    L F PESPR+L
Sbjct:   21 LGSLQFGYNTGVINAPQKVIEEFYNQTWNHRYGESIPSTTLT-TLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNADLWPLLLSVIFIPALLQCILLPFCPESPRFL 214          
The following BLAST results are available for this feature:
BLAST of CF835377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
STP11_ARATH1.336e-1530.56Sugar transport protein 11 OS=Arabidopsis thaliana... [more]
HUP1_CHLKE1.336e-1534.00H(+)/hexose cotransporter 1 OS=Chlorella kessleri ... [more]
GTR5_MOUSE1.336e-1533.33Solute carrier family 2, facilitated glucose trans... [more]
GTR1_LEIDO1.336e-1529.51Membrane transporter D1 OS=Leishmania donovani PE=... [more]
GTR1_HUMAN1.336e-1528.87Solute carrier family 2, facilitated glucose trans... [more]
GTR1_CHICK1.336e-1529.23Solute carrier family 2, facilitated glucose trans... [more]
YIR0_YEAST1.745e-1533.33Putative transporter-like protein YIL170W OS=Sacch... [more]
HXT9_YEAST1.745e-1533.33Hexose transporter HXT9 OS=Saccharomyces cerevisia... [more]
HXT11_YEAST1.745e-1533.33Hexose transporter HXT11 OS=Saccharomyces cerevisi... [more]
GTR1_RAT1.745e-1528.72Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835377 ID=CF835377; Name=CF835377; organism=Citrus sinensis; type=EST; length=771bp
ACGATCTCTTTGAAGCATTCCATCAAATCAATAATCATCCAAACACCAAC
ACCGTCTCCGTCGATCGTAAAGTAACGAGAGGCAATGAGTTTTAGAGACG
ATAATGAAGAAGCGGCTAATCTCCGTAAGCCGTTTCTCCACACGGGGAGT
TGGTACAAAATGGGCTCCAGACAGTCGAGTATCATGTCGTCATCGGCTCA
GATGCTTCGTGACGGCTCCGTCTCCGTTGTCTTTTGCGTCCTCGTCGTCG
CCCTCGGCCCCATCCAATTCGGTTTCACTTGTGGCTACTCTTCACCTACG
CAAGCCGAAATCATCAGCGATCTTAAACTTACAATTTCGGAGTTCTCTAT
ATTTGGCTCTTTAGCCAATGTGGGTGCTATGGTTGGTGCAATAGCTAGCG
GTCAGATAGCAGAGTACATTGGCCGAAAAGGGTCCCTAATGATTGCTGCT
GTTCCTAATATTATAGGATGGCTCATCATATCTTTCTCCAAAGATTCCTC
GTTTTTATTTATGGGAAGGTTGTTGGAAGGATTTGGTGTTGGTGTAATCT
CTTACACGGTGCCCGTGTACATAGCTGAGATAGCACCTCAAAATATGAGA
GGAAGTCTTGGATCTGTCAATCAGCTCTCAGTTACGATTGGAATTATGCT
GGCGTATCTATTGGGGCTTTTTGTCAATTGGAGAGTGCTTGCGGTTTTAG
GAGTTCTGCCATGTACATTGTTGATACCTGGATTGTTTTTCATACCAGAA
TCTCCTCGATGGCTGGCCAAA
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