CF835377

Overview
NameCF835377
Unique NameCF835377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: STP2_ARATH (Sugar transport protein 2 OS=Arabidopsis thaliana GN=STP2 PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 8.663e-15
Identity = 47/141 (33.33%), Postives = 78/141 (55.32%), Query Frame = 1
Query:  349 IFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLA----YLLGLFVN-WRVLAVLGVLPCTLLIPGLFFIPESP 756
            +F S   +  +  +  S  ++   GRK ++M+A++  ++G ++   +++   L  GR+L GFG+G  + TVP++I+EIAP   RG L  + Q  +TIGI+ A    YL     N WR       +P  +L+ G FFI E+P
Sbjct:   83 LFTSSLYLAGIFASFISSYVSRAFGRKPTIMLASIFFLVGAILNLSAQELGMLIGGRILLGFGIGFGNQTVPLFISEIAPARYRGGLNVMFQFLITIGILAASYVNYLTSTLKNGWRYSLGGAAVPALILLIGSFFIHETP 223          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: HXT8_YEAST (Hexose transporter HXT8 OS=Saccharomyces cerevisiae GN=HXT8 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.663e-15
Identity = 51/146 (34.93%), Postives = 79/146 (54.11%), Query Frame = 1
Query:  358 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSF-LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            S+ NVG+ +G +   ++ +  GR   L+I  V  ++G +I   S D  +  F+GR++ G G G IS   P+ I+E AP+++RG+L +  QL VT  I L Y            V WRV   L      ++I G+ F+PESPR+L +
Sbjct:  122 SIFNVGSAIGCLFLSKLGDIYGRCMGLIIVIVVYMVGIVIQIASIDKWYQYFIGRIIAGIGAGSISVLAPMLISETAPKHIRGTLLACWQLMVTFAIFLGYCTNYGTKTYSNSVQWRVPLGLCFAWAIIMIGGMTFVPESPRFLVQ 267          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: HUP2_CHLKE (H(+)/hexose cotransporter 2 OS=Chlorella kessleri GN=HUP2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.663e-15
Identity = 49/147 (33.33%), Postives = 83/147 (56.46%), Query Frame = 1
Query:  340 EFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG-----LFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            +  +F S   +  M  +  +G +    GRK +++IA+V  + G  + + ++D + L +GR+L GFGVG  +  VP+Y++E AP   RG L  + QL+VTIGI++A L+      +   WR+   L  +P  +L+ G   +PE+P  L
Sbjct:   88 KLQLFTSSFFLAGMFVSFFAGSVVRRWGRKPTMLIASVLFLAGAGLNAGAQDLAMLVIGRVLLGFGVGGGNNAVPLYLSECAPPKYRGGLNMMFQLAVTIGIIVAQLVNYGTQTMNNGWRLSLGLAGVPAIILLIGSLLLPETPNSL 234          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: STP14_ARATH (Sugar transport protein 14 OS=Arabidopsis thaliana GN=STP14 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.131e-14
Identity = 41/148 (27.70%), Postives = 79/148 (53.38%), Query Frame = 1
Query:  346 SIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV------NWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            ++F S      ++    +  +    GR+GS+++ +V   +G +I + +K+   L +GR+  G G+G  +  VP+Y++E+AP  +RG++  + QL+  IGI++A L+           WR+   L  +P  L+  G   +PE+P  L +
Sbjct:   86 TLFTSSLYFAGLISTFGASYVTRIYGRRGSILVGSVSFFLGGVINAAAKNILMLILGRIFLGIGIGFGNQAVPLYLSEMAPAKIRGTVNQLFQLTTCIGILVANLINYKTEQIHPWGWRLSLGLATVPAILMFLGGLVLPETPNSLVE 233          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR7_HUMAN (Solute carrier family 2, facilitated glucose transporter member 7 OS=Homo sapiens GN=SLC2A7 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.131e-14
Identity = 49/157 (31.21%), Postives = 87/157 (55.41%), Query Frame = 1
Query:  319 DLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAY------LLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRW 762
            D KL +  +S   S+  +G ++G++  G + +  GRKG+L+I  +  II  +++  SK +     +   R++ G   G+    +P+Y+ E+AP+N+RG +G++ ++ V +G+ LA       +LG    W VL  L  +P  L +  L F PESPR+
Sbjct:   69 DGKLMLLLWSCTVSMFPLGGLLGSLLVGLLVDSCGRKGTLLINNIFAIIPAILMGVSKVAKAFELIVFSRVVLGVCAGISYSALPMYLGELAPKNLRGMVGTMTEVFVIVGVFLAQIFSLQAILGNPAGWPVLLALTGVPALLQLLTLPFFPESPRY 225          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR12_BOVIN (Solute carrier family 2, facilitated glucose transporter member 12 OS=Bos taurus GN=SLC2A12 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.131e-14
Identity = 53/170 (31.18%), Postives = 91/170 (53.53%), Query Frame = 1
Query:  271 GFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG-LFVN----WRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            G+  G  S    +I + L LT  E  +  S   +GA++ ++  G + +  GR+ ++++++    +G L++  S   + L  GR+  G  + + S    VYIAEIAPQ+ RG L S+N+L + IGI+ AY+    F N    W+ +  L +    L    ++F+P SPR+L
Sbjct:   59 GYELGIISGALLQIRTLLVLTCHEQEMVVSSLLIGALLASLIGGVLIDRYGRRAAIILSSCLLGLGSLVLIISLSYTTLIGGRIAIGVFISLSSTATCVYIAEIAPQHRRGLLVSLNELMIVIGILFAYISNYAFANISHGWKYMFGLVIPLGVLQAIAMYFLPPSPRFL 228          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GLCP_SYNY3 (Glucose transport protein OS=Synechocystis sp. (strain PCC 6803) GN=gtr PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.131e-14
Identity = 58/189 (30.69%), Postives = 87/189 (46.03%), Query Frame = 1
Query:  250 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----------------NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            ALG   FGF     +   A +    +       +  SLA +G+ +GA  +G IA+  GR  ++++AAV   +  +              R+L G GVG  S   P YIAE++P ++RG LGS+ QL++  GI +A L   F+                  WR +    ++P  L     F IPESPR+L
Sbjct:   25 ALGGFLFGFDTAVINGAVAALQKHFQTDSLLTGLSVSLALLGSALGAFGAGPIADRHGRIKTMILAAVLFTLSSIGSGLPFTIWDFIFWRVLGGIGVGAASVIAPAYIAEVSPAHLRGRLGSLQQLAIVSGIFIALLSNWFIALMAGGSAQNPWLFGAAAWRWMFWTELIPALLYGVCAFLIPESPRYL 213          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: QAY_NEUTR (Quinate permease OS=Neurospora terricola GN=qa-y PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.930e-14
Identity = 50/149 (33.56%), Postives = 81/149 (54.36%), Query Frame = 1
Query:  358 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS----KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVN---------WRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            S+   GA  G++ +   + ++GR+ SL+  +V  IIG  I+  +    +  + +  GR+L G GVG  S  VP+YI+E+AP  +RG L  + +L   IG ++ + +   VN         W +   + ++P  LL  G F+IPESPRWL
Sbjct:   74 SVYQAGAFFGSLFAFATSYFLGRRKSLIAFSVVFIIGAAIMLAADGQGRGIAPIIAGRVLAGIGVGGASNMVPIYISELAPPAVRGRLVGIYELGWQIGGLVGFWINYGVNTTMAPTRSQWLIPFAVQLIPAGLLFLGSFWIPESPRWL 222          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR1_RABIT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Oryctolagus cuniculus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.930e-14
Identity = 54/195 (27.69%), Postives = 101/195 (51.79%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISD--------------LKLTISE-FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK---DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV------NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            LG +QFG+  G  +  Q ++I +              L  T++  +S+  ++ +VG M+G+ + G      GR+ S+++  +   +  +++ FSK       L +GR + G   G+ +  VP+Y+ E++P  +RG+LG+++QL + +GI++A + GL         W +L  +  +P  L    L   PESPR+L
Sbjct:   21 LGSLQFGYNTGVINAPQ-KVIEEFYNQTWIHRYGERILPTTLTTLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLAKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNEDLWPLLLSVIFVPALLQCIVLPLCPESPRFL 214          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: QAY_NEUAF (Quinate permease OS=Neurospora africana GN=qa-y PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.520e-14
Identity = 50/149 (33.56%), Postives = 80/149 (53.69%), Query Frame = 1
Query:  358 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS----KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVN---------WRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            S+   GA  G++ +   + ++GR+ SL+  +V  IIG  I+  +    +    +  GR+L G GVG  S  VP+YI+E+AP  +RG L  + +L   IG ++ + +   VN         W +   + ++P  LL  G F+IPESPRWL
Sbjct:   74 SVYQAGAFFGSLFAFATSYFLGRRRSLIAFSVVFIIGAAIMLAADGQRRGVDPIIAGRVLAGIGVGGASNMVPIYISELAPPAVRGRLVGIYELGWQIGGLVGFWINYGVNTTMAPTRSQWLIPFAVQLIPAGLLFLGSFWIPESPRWL 222          
The following BLAST results are available for this feature:
BLAST of CF835377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
STP2_ARATH8.663e-1533.33Sugar transport protein 2 OS=Arabidopsis thaliana ... [more]
HXT8_YEAST8.663e-1534.93Hexose transporter HXT8 OS=Saccharomyces cerevisia... [more]
HUP2_CHLKE8.663e-1533.33H(+)/hexose cotransporter 2 OS=Chlorella kessleri ... [more]
STP14_ARATH1.131e-1427.70Sugar transport protein 14 OS=Arabidopsis thaliana... [more]
GTR7_HUMAN1.131e-1431.21Solute carrier family 2, facilitated glucose trans... [more]
GTR12_BOVIN1.131e-1431.18Solute carrier family 2, facilitated glucose trans... [more]
GLCP_SYNY31.131e-1430.69Glucose transport protein OS=Synechocystis sp. (st... [more]
QAY_NEUTR1.930e-1433.56Quinate permease OS=Neurospora terricola GN=qa-y P... [more]
GTR1_RABIT1.930e-1427.69Solute carrier family 2, facilitated glucose trans... [more]
QAY_NEUAF2.520e-1433.56Quinate permease OS=Neurospora africana GN=qa-y PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835377 ID=CF835377; Name=CF835377; organism=Citrus sinensis; type=EST; length=771bp
ACGATCTCTTTGAAGCATTCCATCAAATCAATAATCATCCAAACACCAAC
ACCGTCTCCGTCGATCGTAAAGTAACGAGAGGCAATGAGTTTTAGAGACG
ATAATGAAGAAGCGGCTAATCTCCGTAAGCCGTTTCTCCACACGGGGAGT
TGGTACAAAATGGGCTCCAGACAGTCGAGTATCATGTCGTCATCGGCTCA
GATGCTTCGTGACGGCTCCGTCTCCGTTGTCTTTTGCGTCCTCGTCGTCG
CCCTCGGCCCCATCCAATTCGGTTTCACTTGTGGCTACTCTTCACCTACG
CAAGCCGAAATCATCAGCGATCTTAAACTTACAATTTCGGAGTTCTCTAT
ATTTGGCTCTTTAGCCAATGTGGGTGCTATGGTTGGTGCAATAGCTAGCG
GTCAGATAGCAGAGTACATTGGCCGAAAAGGGTCCCTAATGATTGCTGCT
GTTCCTAATATTATAGGATGGCTCATCATATCTTTCTCCAAAGATTCCTC
GTTTTTATTTATGGGAAGGTTGTTGGAAGGATTTGGTGTTGGTGTAATCT
CTTACACGGTGCCCGTGTACATAGCTGAGATAGCACCTCAAAATATGAGA
GGAAGTCTTGGATCTGTCAATCAGCTCTCAGTTACGATTGGAATTATGCT
GGCGTATCTATTGGGGCTTTTTGTCAATTGGAGAGTGCTTGCGGTTTTAG
GAGTTCTGCCATGTACATTGTTGATACCTGGATTGTTTTTCATACCAGAA
TCTCCTCGATGGCTGGCCAAA
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