CF835377

Overview
NameCF835377
Unique NameCF835377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:1..771. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR11_HUMAN (Solute carrier family 2, facilitated glucose transporter member 11 OS=Homo sapiens GN=SLC2A11 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.639e-13
Identity = 45/155 (29.03%), Postives = 83/155 (53.55%), Query Frame = 1
Query:  328 LTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF------VNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            L +  +S+  SL  +G + GA+ +G +A  +GRK SL++  +  +   ++  FS+ +     + +GRLL G   GV     P+Y+ E AP+ +RG++   + +   +GI++  ++GL         W +L    ++P  L +  L  +PESPR+L
Sbjct:   62 LVLLMWSLIVSLYPLGGLFGALLAGPLAITLGRKKSLLVNNIFVVSAAILFGFSRKAGSFEMIMLGRLLVGVNAGVSMNIQPMYLGESAPKELRGAVAMSSAIFTALGIVMGQVVGLRELLGGPQAWPLLLASCLVPGALQLASLPLLPESPRYL 216          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: YNCC_BACSU (Putative metabolite transport protein yncC OS=Bacillus subtilis GN=yncC PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 6.208e-13
Identity = 51/182 (28.02%), Postives = 86/182 (47.25%), Query Frame = 1
Query:  256 GPIQFGFTCGYSS---PTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVN---------WRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            G + FG+  G  +   P  A     L LT     +  S+  +GA  GA+  G++A+  GR+  ++  +    +  L  + + +   + + R L G  VG  S  VP ++AE+AP   RG + + N+L +  G  LAY+    +          WR + V+  +P  +L   +  +PESPRWL
Sbjct:   21 GGLLFGYDTGVINGALPFMARP-DQLDLTPVTEGLVTSILLLGAAFGALLCGRLADRYGRRKMILNLSFLFFLASLGTALAPNVFIMAVFRFLLGLAVGGASAMVPAFLAEMAPHEKRGRMVTQNELMIVGGQFLAYVFNAILGVTMANTGHVWRYMLVICAVPAIMLFASMLKVPESPRWL 201          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GHT8_SCHPO (Probable high-affinity hexose transporter ght8, mitochondrial OS=Schizosaccharomyces pombe GN=ght8 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.208e-13
Identity = 43/144 (29.86%), Postives = 80/144 (55.56%), Query Frame = 1
Query:  361 LANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSF--LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            + NVG+M G I S  + + IG++ S+M   +  +IG +I+  +   S+  + + ++  G  +G +S   P + +E+AP  +RG++ +  QL+VT GI +A  + +          WRV   + +L   ++  G+ F+PESPR+L
Sbjct:   64 MVNVGSMTGCILSSPLMDRIGKRVSIMFWTIVYLIG-IILQVTAVPSWVQIMVAKIWTGLAIGALSVLAPGFQSEVAPATLRGTIVTTYQLAVTGGIFIAACINMGTHKLHKTAQWRVSMGINLLWGIIMFIGISFLPESPRYL 206          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR9_HUMAN (Solute carrier family 2, facilitated glucose transporter member 9 OS=Homo sapiens GN=SLC2A9 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.108e-13
Identity = 47/150 (31.33%), Postives = 80/150 (53.33%), Query Frame = 1
Query:  343 FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            +S+  S+  +G +VG +    I + +GRK +L+      I   L+++ S  +     L +GR + G   GV    +P+Y++EI+P+ +RGSLG V  + + IG+    LLGL         W  L  + V+P  + +  L F+P+SPR+L
Sbjct:  110 WSVTVSIFAIGGLVGTLIVKMIGKVLGRKHTLLANNGFAISAALLMACSLQAGAFEMLIVGRFIMGIDGGVALSVLPMYLSEISPKEIRGSLGQVTAIFICIGVFTGQLLGLPELLGKESTWPYLFGVIVVPAVVQLLSLPFLPDSPRYL 259          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR9_PONAB (Solute carrier family 2, facilitated glucose transporter member 9 OS=Pongo abelii GN=SLC2A9 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.059e-12
Identity = 46/150 (30.67%), Postives = 80/150 (53.33%), Query Frame = 1
Query:  343 FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            +S+  S+  +G +VG +    I + +GRK +L+      I   L+++ S  +     L +GR + G   G+    +P+Y++EI+P+ +RGSLG V  + + IG+    LLGL         W  L  + V+P  + +  L F+P+SPR+L
Sbjct:  110 WSVTVSIFAIGGLVGTLMVKMIGKVLGRKHTLLANNGFAISAALLMACSLQAGAFEMLIVGRFIMGIDGGIALSVLPMYLSEISPKEIRGSLGQVTAIFICIGVFTGQLLGLPELLGKESTWPYLFGVIVVPAVVQLLSLPFLPDSPRYL 259          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR3_DROME (Glucose transporter type 3 OS=Drosophila melanogaster GN=Glut3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.059e-12
Identity = 43/174 (24.71%), Postives = 82/174 (47.13%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGS----LANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRW 762
            +G   FG   G+S   +  ++     +     +  S    L  +GA +  +  G +   +G + +++I  +PN +GW +  F++    L+ GR   G   G     VP+Y AEI+    RG++G V + +   G++ ++ + LF+  R++  +  L    L P    +PESP +
Sbjct:   60 IGSFFFGIAVGWSGTAERSVMEQHSYSFQPTELQWSGVCILLTLGAALWCLPMGLMVRLLGCRRTILIQLLPNFLGWFLTVFARSVPMLYAGRFFLGMCGGAHCVVVPIYNAEISTTKKRGAMGVVFEGACICGVIYSFAMSLFLELRIINFVN-LGLLALGPLQILMPESPAY 232          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: STP3_ARATH (Sugar transport protein 3 OS=Arabidopsis thaliana GN=STP3 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.383e-12
Identity = 39/140 (27.86%), Postives = 73/140 (52.14%), Query Frame = 1
Query:  352 FGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLL-----GLFVNWRVLAVLGVLPCTLLIPGLFFIPESP 756
            F S   V  ++  + +  +    GRK S+ +  V  + G  +   +++ + L + RLL G GVG  + +VP+Y++E+AP   RG++ +  QL + IG + A ++      +   WR+      +P ++L  G  F+PE+P
Sbjct:   91 FTSSLYVSGLIATLLASSVTRSWGRKPSIFLGGVSFLAGAALGGSAQNVAMLIIARLLLGVGVGFANQSVPLYLSEMAPAKYRGAISNGFQLCIGIGFLSANVINYETQNIKHGWRISLATAAIPASILTLGSLFLPETP 230          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: QUTD_EMENI (Quinate permease OS=Emericella nidulans GN=qutD PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.383e-12
Identity = 49/148 (33.11%), Postives = 75/148 (50.68%), Query Frame = 1
Query:  358 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIG---WLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVN---------WRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            SL   GA  GA+ +  I  + GR+  LM +A+   +G    L  +  +    ++ GR+L G GVG  S   P+YI+E+AP  +RG L  V +L   IG ++ + +   V+         W +   + ++P  LLI G   I ESPRWL
Sbjct:   71 SLYQAGAFFGALFAYPIGHFWGRRWGLMFSALIFFLGAGMMLGANGDRGLGLIYGGRVLAGIGVGAGSNICPIYISEMAPPAIRGRLVGVYELGWQIGGVVGFWINYGVDETLAPSHKQWIIPFAVQLIPAGLLIIGALLIRESPRWL 218          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: S22A2_MOUSE (Solute carrier family 22 member 2 OS=Mus musculus GN=Slc22a2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.806e-12
Identity = 52/178 (29.21%), Postives = 90/178 (50.56%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLTISE---FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGF---GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIM-LAYLLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            L P + G+   Y +P  + I+++  L  +      +F SL NVG  +GA+  G +A+  GRK  L++  + N I  ++++ S + +++ + R L+G       +I Y   + I E      R ++G   Q++ T+G++ LA +     NWR L     LP    +   + IPESPRWL
Sbjct:  119 LSPCEHGWV--YDTPGSS-IVTEFNLVCAHSWMLDLFQSLVNVGFFIGAVGIGYLADRFGRKFCLLVTILINAISGVLMAISPNYAWMLVFRFLQGLVSKAGWLIGY---ILITEFVGLGYRRTVGICYQIAFTVGLLILAGVAYALPNWRWLQFAVTLPNFCFLLYFWCIPESPRWL 290          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR3_RABIT (Solute carrier family 2, facilitated glucose transporter member 3 (Fragment) OS=Oryctolagus cuniculus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.806e-12
Identity = 43/111 (38.74%), Postives = 64/111 (57.66%), Query Frame = 1
Query:  460 IIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            II   ++ F+K +     L +GRLL G   G+ +  VP+YI E++P  +RG+ G++NQL + IGI++A + GL       V W VL    ++P  L    L F PESPR+L
Sbjct:    5 IIAGCLMGFAKIAESVEMLILGRLLIGIFCGLCTGFVPMYIGEVSPTALRGAFGTLNQLGIVIGILVAQIFGLEIILGSEVLWPVLLGFTIIPAILQSAALPFCPESPRFL 115          
The following BLAST results are available for this feature:
BLAST of CF835377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
GTR11_HUMAN3.639e-1329.03Solute carrier family 2, facilitated glucose trans... [more]
YNCC_BACSU6.208e-1328.02Putative metabolite transport protein yncC OS=Baci... [more]
GHT8_SCHPO6.208e-1329.86Probable high-affinity hexose transporter ght8, mi... [more]
GTR9_HUMAN8.108e-1331.33Solute carrier family 2, facilitated glucose trans... [more]
GTR9_PONAB1.059e-1230.67Solute carrier family 2, facilitated glucose trans... [more]
GTR3_DROME1.059e-1224.71Glucose transporter type 3 OS=Drosophila melanogas... [more]
STP3_ARATH1.383e-1227.86Sugar transport protein 3 OS=Arabidopsis thaliana ... [more]
QUTD_EMENI1.383e-1233.11Quinate permease OS=Emericella nidulans GN=qutD PE... [more]
S22A2_MOUSE1.806e-1229.21Solute carrier family 22 member 2 OS=Mus musculus ... [more]
GTR3_RABIT1.806e-1238.74Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835377 ID=CF835377; Name=CF835377; organism=Citrus sinensis; type=EST; length=771bp
ACGATCTCTTTGAAGCATTCCATCAAATCAATAATCATCCAAACACCAAC
ACCGTCTCCGTCGATCGTAAAGTAACGAGAGGCAATGAGTTTTAGAGACG
ATAATGAAGAAGCGGCTAATCTCCGTAAGCCGTTTCTCCACACGGGGAGT
TGGTACAAAATGGGCTCCAGACAGTCGAGTATCATGTCGTCATCGGCTCA
GATGCTTCGTGACGGCTCCGTCTCCGTTGTCTTTTGCGTCCTCGTCGTCG
CCCTCGGCCCCATCCAATTCGGTTTCACTTGTGGCTACTCTTCACCTACG
CAAGCCGAAATCATCAGCGATCTTAAACTTACAATTTCGGAGTTCTCTAT
ATTTGGCTCTTTAGCCAATGTGGGTGCTATGGTTGGTGCAATAGCTAGCG
GTCAGATAGCAGAGTACATTGGCCGAAAAGGGTCCCTAATGATTGCTGCT
GTTCCTAATATTATAGGATGGCTCATCATATCTTTCTCCAAAGATTCCTC
GTTTTTATTTATGGGAAGGTTGTTGGAAGGATTTGGTGTTGGTGTAATCT
CTTACACGGTGCCCGTGTACATAGCTGAGATAGCACCTCAAAATATGAGA
GGAAGTCTTGGATCTGTCAATCAGCTCTCAGTTACGATTGGAATTATGCT
GGCGTATCTATTGGGGCTTTTTGTCAATTGGAGAGTGCTTGCGGTTTTAG
GAGTTCTGCCATGTACATTGTTGATACCTGGATTGTTTTTCATACCAGAA
TCTCCTCGATGGCTGGCCAAA
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