CF835377

Overview
NameCF835377
Unique NameCF835377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: STA_RICCO (Sugar carrier protein A OS=Ricinus communis GN=STA PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.359e-12
Identity = 40/144 (27.78%), Postives = 75/144 (52.08%), Query Frame = 1
Query:  352 FGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVN------WRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            F S   +  +  ++ +G I    GR+ S++   +  +IG  + + + + + L +GR++ G G+G  +  VP+Y++E+AP ++RG L  + QL+ T GI  A ++    +      WR+   L   P  L+  G   +PE+P  L
Sbjct:   88 FTSSLYLAGLAASLVAGPITRIYGRRASIISGGISFLIGAALNATAINLAMLLLGRIMLGVGIGFGNQAVPLYLSEMAPTHLRGGLNIMFQLATTSGIFTANMVNYGTHKLESWGWRLSLGLAAAPALLMTIGGLLLPETPNSL 231          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: S22A2_RAT (Solute carrier family 22 member 2 OS=Rattus norvegicus GN=Slc22a2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.359e-12
Identity = 52/178 (29.21%), Postives = 91/178 (51.12%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLTISE---FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGF---GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIM-LAYLLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            LGP + G+   Y++P  + I+++  L  +      +F S+ NVG  +GA+  G +A+  GRK  L++  + N I   +++ S + +++ + R L+G       +I Y   + I E      R  +G   Q++ T+G++ LA +  +  NWR L     LP    +   + IPESPRWL
Sbjct:  119 LGPCEHGWV--YNTPGSS-IVTEFNLVCAHSWMLDLFQSVVNVGFFIGAMMIGYLADRFGRKFCLLVTILINAISGALMAISPNYAWMLVFRFLQGLVSKAGWLIGY---ILITEFVGLGYRRMVGICYQIAFTVGLLILAGVAYVIPNWRWLQFAVTLPNFCFLLYFWCIPESPRWL 290          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: S22A1_RAT (Solute carrier family 22 member 1 OS=Rattus norvegicus GN=Slc22a1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.359e-12
Identity = 51/178 (28.65%), Postives = 91/178 (51.12%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLTISE---FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGF---GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIM-LAYLLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            LGP + G+   Y +P  + I+++  L   +     +F S  N+G  +G++  G IA+  GRK  L++  +   +  ++ + + D + + + RLL+G    G  V  YT+   I E      R +   + Q++ T+G++ LA +     +WR L +   LP  L +   +F+PESPRWL
Sbjct:  119 LGPCEHGWV--YDTPGSS-IVTEFNLVCGDAWKVDLFQSCVNLGFFLGSLVVGYIADRFGRKLCLLVTTLVTSVSGVLTAVAPDYTSMLLFRLLQGMVSKGSWVSGYTL---ITEFVGSGYRRTTAILYQMAFTVGLVGLAGVAYAIPDWRWLQLAVSLPTFLFLLYYWFVPESPRWL 290          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: S22A2_RABIT (Solute carrier family 22 member 2 OS=Oryctolagus cuniculus GN=SLC22A2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.081e-12
Identity = 50/178 (28.09%), Postives = 92/178 (51.69%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLTISE---FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGF---GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIM-LAYLLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            LGP Q G+   Y +P  + I+++  L  +      +F S  N+G  +G++  G +A+  GRK  L++  + N    ++++ S + +++ + RL++G       +I Y   + I E    N R ++G + Q++ T+G++ LA +      WR L +   LP    +   + IPESPRWL
Sbjct:  118 LGPCQHGWV--YDTPGSS-IVTEFNLVCARSWMLDLFQSAVNIGFFIGSVGIGYLADRFGRKLCLLVTILINAAAGVLMAVSPNYTWMLIFRLIQGLVSKAGWLIGY---ILITEFVGLNYRRTVGILYQVAFTVGLLVLAGVAYALPRWRWLQLTVTLPYFCFLLYYWCIPESPRWL 289          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GHT2_SCHPO (High-affinity glucose transporter ght2 OS=Schizosaccharomyces pombe GN=ght2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.024e-12
Identity = 47/161 (29.19%), Postives = 83/161 (51.55%), Query Frame = 1
Query:  310 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSF--LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            I     L+ +   +   + NVG++ G I S  IA+  G++ S++      IIG +I+  +   S+  + + ++  G G+G +S   P Y +E AP ++RG++    QL VT GI +A  + +          WRV   + +L   + + G+ F+PESPR+L
Sbjct:   51 ITDQYSLSSARQGLLTGMVNVGSLFGCIISSPIADRFGKRLSIIGFCAVYIIG-IIVQVTAVPSWVQIMVAKIWTGIGIGALSVLAPGYQSETAPPSIRGTVVVTYQLFVTGGIFIAACINMGTHKLHKTAQWRVSIGINLLWGIITMIGILFLPESPRYL 210          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GHT4_SCHPO (High-affinity hexose transporter ght4 OS=Schizosaccharomyces pombe GN=ght4 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.255e-12
Identity = 45/141 (31.91%), Postives = 73/141 (51.77%), Query Frame = 1
Query:  367 NVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFM-GRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            N G + GA+ S    E IG+K S+   +   IIG +++  +  S    M G+L  G  +G +S   P Y +E+AP  +RG++ S  QL  T G ++A  + +         +WR    + +L    L+ G+ F+PESPR+L
Sbjct:   66 NAGCLFGAMLSSPFTEAIGKKYSIAFFSGCYIIGQILLVTAVPSWVQIMVGKLFTGLTIGALSVLSPGYQSEVAPPQIRGAVVSTYQLFQTCGTLIAACINMGTHKLRKTASWRTSFGINILWGIFLMVGVLFLPESPRYL 206          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: STP5_ARATH (Sugar transport protein 5 OS=Arabidopsis thaliana GN=STP5 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.864e-12
Identity = 37/140 (26.43%), Postives = 71/140 (50.71%), Query Frame = 1
Query:  352 FGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVN-----WRVLAVLGVLPCTLLIPGLFFIPESP 756
            F S   V  +V ++ + ++    GR+ ++++     + G LI   + + + L  GR+L GFGVG  +   PVY++E+AP   RG+        +++G++ A L+    +     WR+   L  +P  ++  G  FI ++P
Sbjct:   85 FTSSLYVAGLVASLVASRLTAAYGRRTTMILGGFTFLFGALINGLAANIAMLISGRILLGFGVGFTNQAAPVYLSEVAPPRWRGAFNIGFSCFISMGVVAANLINYGTDSHRNGWRISLGLAAVPAAIMTVGCLFISDTP 224          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: S22A1_RABIT (Solute carrier family 22 member 1 OS=Oryctolagus cuniculus GN=SLC22A1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.964e-12
Identity = 50/178 (28.09%), Postives = 93/178 (52.25%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLTISE---FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGF---GVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIM-LAYLLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            LGP Q G+   Y +P  + I+++  L  ++     +F S  N+G  +G++  G IA+  GRK  L++  + N +  ++ + + D + + + RLL+G    G  +  YT+   I E      R ++  + Q++ ++G++ L+ +     NWR L +   LP  L +   + +PESPRWL
Sbjct:  118 LGPCQHGWV--YDTPGSS-IVTEFNLVCADAWKVDLFQSCVNLGFFLGSLGVGYIADRFGRKLCLLLTTLINAVSGVLTAVAPDYTSMLLFRLLQGLVSKGSWMSGYTL---ITEFVGSGYRRTVAILYQVAFSVGLVALSGVAYAIPNWRWLQLTVSLPTFLCLFYYWCVPESPRWL 289          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: HEX6_RICCO (Hexose carrier protein HEX6 OS=Ricinus communis GN=HEX6 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.171e-11
Identity = 44/160 (27.50%), Postives = 74/160 (46.25%), Query Frame = 1
Query:  307 EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-------NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            EI +  K      + F S   V  +V +  +  +    GRK S+++     +    +   + +   L  GR+L G GVG  +  VP+Y++E+AP   RG++ +  Q SV IG + A L+            WR+   +  +P  +L  G  F+PE+P  L
Sbjct:   69 EISNYCKFDSQLLTSFTSSLYVAGLVASFFASSVTRAFGRKPSILLGGXVFLAXAALGGAAVNVYMLIFGRVLLGVGVGFANQAVPLYLSEMAPPRYRGAINNGFQFSVGIGALSANLINYGTEKIEGGWGWRISLAMAAVPAAILTFGALFLPETPNSL 228          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GHT5_SCHPO (High-affinity glucose transporter ght5 OS=Schizosaccharomyces pombe GN=ght5 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.171e-11
Identity = 41/144 (28.47%), Postives = 78/144 (54.17%), Query Frame = 1
Query:  361 LANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSF--LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            + NVG+  G   S  + + IG++ S+M   +  +IG +I+  +   S+  + + ++  G  +G +S   P + +E+AP ++RG++ +  QL+VT GI +A  + +          WRV   + +L   +   G+ F+PESPR+L
Sbjct:   64 MVNVGSFFGCFLSSPLMDRIGKRTSIMFWTIVYLIG-IILQVTAVPSWVQIMVAKIWTGLSIGALSVLAPGFQSEVAPADLRGTIVTTYQLAVTGGIFIAACINMGTHKLHKTAQWRVSMGINLLWGIITFIGISFLPESPRYL 206          
The following BLAST results are available for this feature:
BLAST of CF835377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
STA_RICCO2.359e-1227.78Sugar carrier protein A OS=Ricinus communis GN=STA... [more]
S22A2_RAT2.359e-1229.21Solute carrier family 22 member 2 OS=Rattus norveg... [more]
S22A1_RAT2.359e-1228.65Solute carrier family 22 member 1 OS=Rattus norveg... [more]
S22A2_RABIT3.081e-1228.09Solute carrier family 22 member 2 OS=Oryctolagus c... [more]
GHT2_SCHPO4.024e-1229.19High-affinity glucose transporter ght2 OS=Schizosa... [more]
GHT4_SCHPO5.255e-1231.91High-affinity hexose transporter ght4 OS=Schizosac... [more]
STP5_ARATH6.864e-1226.43Sugar transport protein 5 OS=Arabidopsis thaliana ... [more]
S22A1_RABIT8.964e-1228.09Solute carrier family 22 member 1 OS=Oryctolagus c... [more]
HEX6_RICCO1.171e-1127.50Hexose carrier protein HEX6 OS=Ricinus communis GN... [more]
GHT5_SCHPO1.171e-1128.47High-affinity glucose transporter ght5 OS=Schizosa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835377 ID=CF835377; Name=CF835377; organism=Citrus sinensis; type=EST; length=771bp
ACGATCTCTTTGAAGCATTCCATCAAATCAATAATCATCCAAACACCAAC
ACCGTCTCCGTCGATCGTAAAGTAACGAGAGGCAATGAGTTTTAGAGACG
ATAATGAAGAAGCGGCTAATCTCCGTAAGCCGTTTCTCCACACGGGGAGT
TGGTACAAAATGGGCTCCAGACAGTCGAGTATCATGTCGTCATCGGCTCA
GATGCTTCGTGACGGCTCCGTCTCCGTTGTCTTTTGCGTCCTCGTCGTCG
CCCTCGGCCCCATCCAATTCGGTTTCACTTGTGGCTACTCTTCACCTACG
CAAGCCGAAATCATCAGCGATCTTAAACTTACAATTTCGGAGTTCTCTAT
ATTTGGCTCTTTAGCCAATGTGGGTGCTATGGTTGGTGCAATAGCTAGCG
GTCAGATAGCAGAGTACATTGGCCGAAAAGGGTCCCTAATGATTGCTGCT
GTTCCTAATATTATAGGATGGCTCATCATATCTTTCTCCAAAGATTCCTC
GTTTTTATTTATGGGAAGGTTGTTGGAAGGATTTGGTGTTGGTGTAATCT
CTTACACGGTGCCCGTGTACATAGCTGAGATAGCACCTCAAAATATGAGA
GGAAGTCTTGGATCTGTCAATCAGCTCTCAGTTACGATTGGAATTATGCT
GGCGTATCTATTGGGGCTTTTTGTCAATTGGAGAGTGCTTGCGGTTTTAG
GAGTTCTGCCATGTACATTGTTGATACCTGGATTGTTTTTCATACCAGAA
TCTCCTCGATGGCTGGCCAAA
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