CF835377

Overview
NameCF835377
Unique NameCF835377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:1..771. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR5_PONAB (Solute carrier family 2, facilitated glucose transporter member 5 OS=Pongo abelii GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.797e-19
Identity = 57/162 (35.19%), Postives = 91/162 (56.17%), Query Frame = 1
Query:  307 EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS---KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            E + D  LT+  +S+  S+   G  +G++  G +    GRKG+L+   + +I+  +++  S   K    + + RLL G   GV S  VP+Y+ E+AP+N+RG+LG V QL +T+GI++A + GL         W +L  L  +P  L +  L F PESPR+L
Sbjct:   60 EFMEDFPLTLL-WSVTVSMFPFGGFIGSLLVGPLVNKFGRKGALLFNNIFSIVPAILMGCSRVAKSFELIIISRLLVGICAGVSSNVVPMYLGELAPKNLRGALGVVPQLFITVGILVAQIFGLRNLLANVDGWPILLGLTGVPAALQLVLLPFFPESPRYL 220          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR4_RAT (Solute carrier family 2, facilitated glucose transporter member 4 OS=Rattus norvegicus GN=Slc2a4 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.797e-19
Identity = 61/198 (30.81%), Postives = 105/198 (53.03%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLT------------------ISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            LG +QFG+  G  +  Q  I      T                   + +++  ++ +VG M+ +   G I++++GRK +++   V  ++G  ++  +  ++    L +GR L G   G+ S  VP+Y+ EIAP ++RG+LG++NQL++ IGI++A +LGL         W +L  + VLP  L +  L F PESPR+L
Sbjct:   33 LGSLQFGYNIGVINAPQKVIEQSYNATWLGRQGPGGPDSIPQGTLTTLWALSVAIFSVGGMISSFLIGIISQWLGRKRAMLANNVLAVLGGALMGLANAAASYEILILGRFLIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAIVIGILVAQVLGLESMLGTATLWPLLLAITVLPALLQLLLLPFCPESPRYL 230          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR4_MOUSE (Solute carrier family 2, facilitated glucose transporter member 4 OS=Mus musculus GN=Slc2a4 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.797e-19
Identity = 62/198 (31.31%), Postives = 103/198 (52.02%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLT------------------ISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK---DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            LG +QFG+  G  +  Q  I      T                   + +++  ++ +VG M+ +   G I++++GRK +++   V  ++G  ++  +        L +GR L G   G+ S  VP+Y+ EIAP ++RG+LG++NQL++ IGI++A +LGL         W +L  L VLP  L +  L F PESPR+L
Sbjct:   33 LGSLQFGYNIGVINAPQKVIEQSYNATWLGRQGPGGPDSIPQGTLTTLWALSVAIFSVGGMISSFLIGIISQWLGRKRAMLANNVLAVLGGALMGLANAVASYEILILGRFLIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAIVIGILVAQVLGLESMLGTATLWPLLLALTVLPALLQLILLPFCPESPRYL 230          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR4_HUMAN (Solute carrier family 2, facilitated glucose transporter member 4 OS=Homo sapiens GN=SLC2A4 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.797e-19
Identity = 62/198 (31.31%), Postives = 106/198 (53.54%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLT------------------ISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            LG +QFG+  G  +  Q  I      T                   + +++  ++ +VG M+ +   G I++++GRK ++++  V  ++G  ++  +  ++    L +GR L G   G+ S  VP+Y+ EIAP ++RG+LG++NQL++ IGI++A +LGL         W +L  L VLP  L +  L F PESPR+L
Sbjct:   33 LGSLQFGYNIGVINAPQKVIEQSYNETWLGRQGPEGPSSIPPGTLTTLWALSVAIFSVGGMISSFLIGIISQWLGRKRAMLVNNVLAVLGGSLMGLANAAASYEMLILGRFLIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAIVIGILIAQVLGLESLLGTASLWPLLLGLTVLPALLQLVLLPFCPESPRYL 230          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR3_RAT (Solute carrier family 2, facilitated glucose transporter member 3 OS=Rattus norvegicus GN=Slc2a3 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.797e-19
Identity = 58/194 (29.90%), Postives = 101/194 (52.06%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLTISE--------------FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLA------YLLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            +G  QFG+  G  +  +  I   L  T+ E              +S+  ++ +VG M+G+ + G      GR+ S+++  +  I+G  ++ F+K +     L +GRL+ G   G+ +  VP+YI E++P  +RG+ G++NQL + +GI++A      ++LG    W  L  L ++P  L    L F PESPR+L
Sbjct:   19 IGSFQFGYNTGVINAPETIIKDFLNYTLEERLEDLPREGLLTTLWSLCVAIFSVGGMIGSFSVGLFVNRFGRRNSMLLVNLIAILGGCLMGFAKIAESVEMLILGRLIIGIFCGLCTGFVPMYIGEVSPTALRGAFGTLNQLGIVVGILVAQVFGLDFILGSEELWPGLLGLTIIPAILQSAALPFCPESPRFL 212          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR3_CANFA (Solute carrier family 2, facilitated glucose transporter member 3 OS=Canis familiaris GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.797e-19
Identity = 59/194 (30.41%), Postives = 99/194 (51.03%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLTISE--------------FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV------NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            +G  QFG+  G  +  +  I   L  T+ E              +S+  ++ +VG M+G+ + G      GR+ S+++  +  + G  ++ F K +     L +GRL+ G   G+ +  VP+YI EI+P  +RG+ G++NQL + IGI++A + GL V       W +L    ++P  L    L F PESPR+L
Sbjct:   19 IGSFQFGYNTGVINAPETIIKDFLNYTLEEKSENLPTEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMVNLLAVAGGCLMGFCKIAQSVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQIFGLKVIMGTEELWPLLLGFTIIPAVLQSAALPFCPESPRFL 212          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: YD387_YEAST (Probable metabolite transport protein YDR387C OS=Saccharomyces cerevisiae GN=YDR387C PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.888e-19
Identity = 56/179 (31.28%), Postives = 101/179 (56.42%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPT----QAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPCTLLIPGLFFIPESPRW 762
            +G + FG+  G  S      + E +S + LT  +  +  S  +VG+  G+I +  +A+  GR+ +L I     I+  + ++ ++  +FL  GRLL G  VGV +  VP++++EI+P  +RG + ++N +++T G +++Y++   +     +WR L  L  +P  L +  L FIPESPRW
Sbjct:   48 IGGLLFGYDTGVISGVLLSLKPEDLSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEIDNSWRYLFALSAIPAILFLSILDFIPESPRW 226          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: MSSP2_ARATH (Monosaccharide-sensing protein 2 OS=Arabidopsis thaliana GN=MSSP2 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 9.888e-19
Identity = 50/143 (34.97%), Postives = 91/143 (63.64%), Query Frame = 1
Query:  358 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAY--LLGLFV----NWR-VLAVLGVLPCTLLIPGLFFIPESPRWL 765
            +++ +GA +    SG +A+++GR+  L+++++   +G L++ +S +   L +GRLL+GFGVG++   VP+YI+E AP  +RG L ++ Q + + G+ L+Y  + G+ +    +WR +L VL +         +FF+PESPRWL
Sbjct:   50 AMSLIGATLITTCSGGVADWLGRRPMLILSSILYFVGSLVMLWSPNVYVLLLGRLLDGFGVGLVVTLVPIYISETAPPEIRGLLNTLPQFTGSGGMFLSYCMVFGMSLMPSPSWRLMLGVLFIPSLVFFFLTVFFLPESPRWL 192          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR5_SHEEP (Solute carrier family 2, facilitated glucose transporter member 5 OS=Ovis aries GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.291e-18
Identity = 57/162 (35.19%), Postives = 93/162 (57.41%), Query Frame = 1
Query:  307 EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS---KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            E +++  LT+  +S+  S+   G  +G++  G +   +GRKG+L+   + +I+  L++ FS   K    + + R+L G   G+ S  VP+Y+ E+AP+N RG+LG V QL +TIGI++A + GL         W +L  L  +P  L +  L F PESPR+L
Sbjct:   60 EYMNEFYLTLL-WSVTVSMFPFGGFLGSLMVGPLVNNLGRKGTLLFNNIFSIVPALLMGFSDLAKSFEMIIVARVLVGICAGLSSNVVPMYLGELAPKNWRGALGVVPQLFITIGILVAQIFGLRSLLANEEGWPILLGLTGIPAVLQLLFLPFFPESPRYL 220          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR5_HUMAN (Solute carrier family 2, facilitated glucose transporter member 5 OS=Homo sapiens GN=SLC2A5 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.291e-18
Identity = 56/162 (34.57%), Postives = 93/162 (57.41%), Query Frame = 1
Query:  307 EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            E + D  LT+  +S+  S+   G  +G++  G +    GRKG+L+   + +I+  +++  S+ ++    + + RLL G   GV S  VP+Y+ E+AP+N+RG+LG V QL +T+GI++A + GL         W +L  L  +P  L +  L F PESPR+L
Sbjct:   60 EFMEDFPLTLL-WSVTVSMFPFGGFIGSLLVGPLVNKFGRKGALLFNNIFSIVPAILMGCSRVATSFELIIISRLLVGICAGVSSNVVPMYLGELAPKNLRGALGVVPQLFITVGILVAQIFGLRNLLANVDGWPILLGLTGVPAALQLLLLPFFPESPRYL 220          
The following BLAST results are available for this feature:
BLAST of CF835377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
GTR5_PONAB5.797e-1935.19Solute carrier family 2, facilitated glucose trans... [more]
GTR4_RAT5.797e-1930.81Solute carrier family 2, facilitated glucose trans... [more]
GTR4_MOUSE5.797e-1931.31Solute carrier family 2, facilitated glucose trans... [more]
GTR4_HUMAN5.797e-1931.31Solute carrier family 2, facilitated glucose trans... [more]
GTR3_RAT5.797e-1929.90Solute carrier family 2, facilitated glucose trans... [more]
GTR3_CANFA5.797e-1930.41Solute carrier family 2, facilitated glucose trans... [more]
YD387_YEAST9.888e-1931.28Probable metabolite transport protein YDR387C OS=S... [more]
MSSP2_ARATH9.888e-1934.97Monosaccharide-sensing protein 2 OS=Arabidopsis th... [more]
GTR5_SHEEP1.291e-1835.19Solute carrier family 2, facilitated glucose trans... [more]
GTR5_HUMAN1.291e-1834.57Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835377 ID=CF835377; Name=CF835377; organism=Citrus sinensis; type=EST; length=771bp
ACGATCTCTTTGAAGCATTCCATCAAATCAATAATCATCCAAACACCAAC
ACCGTCTCCGTCGATCGTAAAGTAACGAGAGGCAATGAGTTTTAGAGACG
ATAATGAAGAAGCGGCTAATCTCCGTAAGCCGTTTCTCCACACGGGGAGT
TGGTACAAAATGGGCTCCAGACAGTCGAGTATCATGTCGTCATCGGCTCA
GATGCTTCGTGACGGCTCCGTCTCCGTTGTCTTTTGCGTCCTCGTCGTCG
CCCTCGGCCCCATCCAATTCGGTTTCACTTGTGGCTACTCTTCACCTACG
CAAGCCGAAATCATCAGCGATCTTAAACTTACAATTTCGGAGTTCTCTAT
ATTTGGCTCTTTAGCCAATGTGGGTGCTATGGTTGGTGCAATAGCTAGCG
GTCAGATAGCAGAGTACATTGGCCGAAAAGGGTCCCTAATGATTGCTGCT
GTTCCTAATATTATAGGATGGCTCATCATATCTTTCTCCAAAGATTCCTC
GTTTTTATTTATGGGAAGGTTGTTGGAAGGATTTGGTGTTGGTGTAATCT
CTTACACGGTGCCCGTGTACATAGCTGAGATAGCACCTCAAAATATGAGA
GGAAGTCTTGGATCTGTCAATCAGCTCTCAGTTACGATTGGAATTATGCT
GGCGTATCTATTGGGGCTTTTTGTCAATTGGAGAGTGCTTGCGGTTTTAG
GAGTTCTGCCATGTACATTGTTGATACCTGGATTGTTTTTCATACCAGAA
TCTCCTCGATGGCTGGCCAAA
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