CF835377

Overview
NameCF835377
Unique NameCF835377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:1..771. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: STP4_ARATH (Sugar transport protein 4 OS=Arabidopsis thaliana GN=STP4 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.428e-17
Identity = 45/147 (30.61%), Postives = 83/147 (56.46%), Query Frame = 1
Query:  346 SIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF-------VNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            ++F S   V A+V ++ +  I    GRK S+ +      IG     F+++ + L +GR+L GFGVG  + +VPVY++E+AP N+RG+  +  Q+++  GI++A ++  F       + WR+   L  +P  +++ G   +P++P  L
Sbjct:   82 TLFTSSLYVAALVSSLFASTITRVFGRKWSMFLGGFTFFIGSAFNGFAQNIAMLLIGRILLGFGVGFANQSVPVYLSEMAPPNLRGAFNNGFQVAIIFGIVVATIINYFTAQMKGNIGWRISLGLACVPAVMIMIGALILPDTPNSL 228          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR2_HUMAN (Solute carrier family 2, facilitated glucose transporter member 2 OS=Homo sapiens GN=SLC2A2 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.428e-17
Identity = 53/164 (32.32%), Postives = 92/164 (56.10%), Query Frame = 1
Query:  301 QAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK---DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            + E ++  +L    +S+  S   VG M  +   G + + +GR  ++++A + +++G L++ FSK       +  GR + G   G+IS  VP+YI EIAP  +RG+LG+ +QL++  GI+++ ++GL      +  W +L  L  +   L    LFF PESPR+L
Sbjct:   83 EEETVAAAQLITMLWSLSVSSFAVGGMTASFFGGWLGDTLGRIKAMLVANILSLVGALLMGFSKLGPSHILIIAGRSISGLYCGLISGLVPMYIGEIAPTALRGALGTFHQLAIVTGILISQIIGLEFILGNYDLWHILLGLSGVRAILQSLLLFFCPESPRYL 246          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: MSSP1_ARATH (Monosaccharide-sensing protein 1 OS=Arabidopsis thaliana GN=MSSP1 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.865e-17
Identity = 55/159 (34.59%), Postives = 89/159 (55.97%), Query Frame = 1
Query:  310 IISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV------NWR-VLAVLGVLPCTLLIPGLFFIPESPRWL 765
            I  DL L  S   +  +++ +GA V    SG I++++GR+  L++++V   +  LI+ +S +   L   RLL GFG G+    VPVYI+E AP  +RG L ++ Q   + G+ L+Y +   +      +WR +L VL +     L   +F++PESPRWL
Sbjct:   32 INKDLNLPTSVQGLVVAMSLIGATVITTCSGPISDWLGRRPMLILSSVMYFVCGLIMLWSPNVYVLCFARLLNGFGAGLAVTLVPVYISETAPPEIRGQLNTLPQFLGSGGMFLSYCMVFTMSLSDSPSWRAMLGVLSIPSLLYLFLTVFYLPESPRWL 190          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: KHT2_KLULA (Hexose transporter 2 OS=Kluyveromyces lactis GN=KHT2 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.865e-17
Identity = 53/146 (36.30%), Postives = 80/146 (54.79%), Query Frame = 1
Query:  358 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSF-LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            S+ N+G  +G I   ++ +  GR+  LMI  +  ++G +I   S D  +  F+GR++ G GVG IS   P+ I+E AP+++RG+L S  QL +T GI L Y            V WRV   L       +I G+ F+PESPR+L +
Sbjct:  117 SIFNIGCAIGGIILSKLGDMYGRRIGLMIVVLIYVVGIIIQIASIDKWYQYFIGRIISGLGVGGISVLSPMLISETAPKHIRGTLVSFYQLMITFGIFLGYCTNYGTKTYSNSVQWRVPLGLCFAWAIFMITGMLFVPESPRFLVE 262          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: HXT7_YEAST (High-affinity hexose transporter HXT6 OS=Saccharomyces cerevisiae GN=HXT7 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.865e-17
Identity = 53/146 (36.30%), Postives = 82/146 (56.16%), Query Frame = 1
Query:  358 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSF-LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            S+ N+G  +G I   ++ +  GRK  L++  V  IIG +I   S +  +  F+GR++ G GVG I+   P+ I+E++P+++RG+L S  QL +T GI L Y            V WRV   L       +I G+ F+PESPR+LA+
Sbjct:  120 SIFNIGCAIGGIILSKLGDMYGRKVGLIVVVVIYIIGIIIQIASINKWYQYFIGRIISGLGVGGIAVLSPMLISEVSPKHLRGTLVSCYQLMITAGIFLGYCTNFGTKNYSNSVQWRVPLGLCFAWALFMIGGMTFVPESPRYLAE 265          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: HXT6_YEAST (High-affinity hexose transporter HXT6 OS=Saccharomyces cerevisiae GN=HXT6 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.865e-17
Identity = 53/146 (36.30%), Postives = 82/146 (56.16%), Query Frame = 1
Query:  358 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSF-LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            S+ N+G  +G I   ++ +  GRK  L++  V  IIG +I   S +  +  F+GR++ G GVG I+   P+ I+E++P+++RG+L S  QL +T GI L Y            V WRV   L       +I G+ F+PESPR+LA+
Sbjct:  120 SIFNIGCAIGGIILSKLGDMYGRKVGLIVVVVIYIIGIIIQIASINKWYQYFIGRIISGLGVGGIAVLSPMLISEVSPKHLRGTLVSCYQLMITAGIFLGYCTNFGTKNYSNSVQWRVPLGLCFAWALFMIGGMTFVPESPRYLAE 265          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR5_RAT (Solute carrier family 2, facilitated glucose transporter member 5 OS=Rattus norvegicus GN=Slc2a5 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.865e-17
Identity = 57/162 (35.19%), Postives = 91/162 (56.17%), Query Frame = 1
Query:  307 EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            E I    LT+  +S+  S+   G  +G++  G +   +GRKG+L+   + +I+  +++  SK +     +   RLL G   G+ S  VP+Y+ E+AP+N+RG+LG V QL +T+GI++A L GL         W +L  L  +P  L +  L F PESPR+L
Sbjct:   59 ENIESFTLTLL-WSLTVSMFPFGGFIGSLMVGFLVNNLGRKGALLFNNIFSILPAILMGCSKIAKSFEIIIASRLLVGICAGISSNVVPMYLGELAPKNLRGALGVVPQLFITVGILVAQLFGLRSVLASEEGWPILLGLTGVPAGLQLLLLPFFPESPRYL 219          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR3_PONAB (Solute carrier family 2, facilitated glucose transporter member 3 OS=Pongo abelii GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.865e-17
Identity = 57/194 (29.38%), Postives = 99/194 (51.03%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLTISE--------------FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISF---SKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-FV-----NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            +G  QFG+  G  +  +  I   +  T+++              +S+  ++ +VG M+G+ + G      GR+ S++I  +  + G   +     +K    L +GRL+ G   G+ +  VP+YI EI+P  +RG+ G++NQL + +GI++A + GL F+      W +L    +LP  L    L F PESPR+L
Sbjct:   19 IGSFQFGYNTGVINAPEKIIKEFINKTLTDKGNAPPSEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFMGLCKVAKSVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVVGILVAQIFGLEFILGSEELWPLLLGFTILPTILQSAALPFCPESPRFL 212          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR3_HUMAN (Solute carrier family 2, facilitated glucose transporter member 3 OS=Homo sapiens GN=SLC2A3 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.865e-17
Identity = 57/194 (29.38%), Postives = 99/194 (51.03%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLTISE--------------FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISF---SKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-FV-----NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            +G  QFG+  G  +  +  I   +  T+++              +S+  ++ +VG M+G+ + G      GR+ S++I  +  + G   +     +K    L +GRL+ G   G+ +  VP+YI EI+P  +RG+ G++NQL + +GI++A + GL F+      W +L    +LP  L    L F PESPR+L
Sbjct:   19 IGSFQFGYNTGVINAPEKIIKEFINKTLTDKGNAPPSEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFMGLCKVAKSVEMLILGRLVIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVVGILVAQIFGLEFILGSEELWPLLLGFTILPAILQSAALPFCPESPRFL 212          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: STP10_ARATH (Sugar transport protein 10 OS=Arabidopsis thaliana GN=STP10 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.181e-17
Identity = 49/142 (34.51%), Postives = 82/142 (57.75%), Query Frame = 1
Query:  349 IFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVN------WRVLAVLGVLPCTLLIPGLFFIPESP 756
            +F S   + A+V +  +  I    GRK S+ I  +  +IG L  +F+ + S L +GRLL G GVG  + + PVY++E+AP  +RG+L    Q+++TIGI++A L+    +      WRV   L  +P  +++ G F +P++P
Sbjct:   86 LFTSSLYLAALVASFMASVITRKHGRKVSMFIGGLAFLIGALFNAFAVNVSMLIIGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILVANLINYGTSKMAQHGWRVSLGLAAVPAVVMVIGSFILPDTP 227          
The following BLAST results are available for this feature:
BLAST of CF835377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
STP4_ARATH1.428e-1730.61Sugar transport protein 4 OS=Arabidopsis thaliana ... [more]
GTR2_HUMAN1.428e-1732.32Solute carrier family 2, facilitated glucose trans... [more]
MSSP1_ARATH1.865e-1734.59Monosaccharide-sensing protein 1 OS=Arabidopsis th... [more]
KHT2_KLULA1.865e-1736.30Hexose transporter 2 OS=Kluyveromyces lactis GN=KH... [more]
HXT7_YEAST1.865e-1736.30High-affinity hexose transporter HXT6 OS=Saccharom... [more]
HXT6_YEAST1.865e-1736.30High-affinity hexose transporter HXT6 OS=Saccharom... [more]
GTR5_RAT1.865e-1735.19Solute carrier family 2, facilitated glucose trans... [more]
GTR3_PONAB1.865e-1729.38Solute carrier family 2, facilitated glucose trans... [more]
GTR3_HUMAN1.865e-1729.38Solute carrier family 2, facilitated glucose trans... [more]
STP10_ARATH3.181e-1734.51Sugar transport protein 10 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835377 ID=CF835377; Name=CF835377; organism=Citrus sinensis; type=EST; length=771bp
ACGATCTCTTTGAAGCATTCCATCAAATCAATAATCATCCAAACACCAAC
ACCGTCTCCGTCGATCGTAAAGTAACGAGAGGCAATGAGTTTTAGAGACG
ATAATGAAGAAGCGGCTAATCTCCGTAAGCCGTTTCTCCACACGGGGAGT
TGGTACAAAATGGGCTCCAGACAGTCGAGTATCATGTCGTCATCGGCTCA
GATGCTTCGTGACGGCTCCGTCTCCGTTGTCTTTTGCGTCCTCGTCGTCG
CCCTCGGCCCCATCCAATTCGGTTTCACTTGTGGCTACTCTTCACCTACG
CAAGCCGAAATCATCAGCGATCTTAAACTTACAATTTCGGAGTTCTCTAT
ATTTGGCTCTTTAGCCAATGTGGGTGCTATGGTTGGTGCAATAGCTAGCG
GTCAGATAGCAGAGTACATTGGCCGAAAAGGGTCCCTAATGATTGCTGCT
GTTCCTAATATTATAGGATGGCTCATCATATCTTTCTCCAAAGATTCCTC
GTTTTTATTTATGGGAAGGTTGTTGGAAGGATTTGGTGTTGGTGTAATCT
CTTACACGGTGCCCGTGTACATAGCTGAGATAGCACCTCAAAATATGAGA
GGAAGTCTTGGATCTGTCAATCAGCTCTCAGTTACGATTGGAATTATGCT
GGCGTATCTATTGGGGCTTTTTGTCAATTGGAGAGTGCTTGCGGTTTTAG
GAGTTCTGCCATGTACATTGTTGATACCTGGATTGTTTTTCATACCAGAA
TCTCCTCGATGGCTGGCCAAA
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