CF835381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.141e-29 Identity = 61/114 (53.51%), Postives = 80/114 (70.18%), Query Frame = 3 Query: 33 LKLVSALLLCMLVTGPLSAQAI-TCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSI-PSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 +KL +L CM+V GP++A A+ +CG V+G+L CI +L G P+ CCNGV +L A TTPDRQ AC CL+ AA+++ P LN AAGLP AC V+IPYKIS ST+C+ VR Sbjct: 5 MKLACMVLACMIVAGPITANALMSCGTVNGNLAGCIAYLTRGAPLTQGCCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP2_SORBI (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.591e-28 Identity = 62/116 (53.45%), Postives = 78/116 (67.24%), Query Frame = 3 Query: 21 QMAALKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 ++A V A +++ S A+TCGQVS ++ PC+ + R G P CC+GVRSLN+AARTT DR+ ACNCLK AAR I LN+ AA +P CGVSIPY ISTSTDCS+V Sbjct: 6 KLAVAIAVVAAAAAVVLAATTSEAAVTCGQVSSAIGPCLSYARGQGSGPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTDCSRV 121
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.714e-28 Identity = 59/111 (53.15%), Postives = 80/111 (72.07%), Query Frame = 3 Query: 36 KLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 K+ ++LCM+V P A+A++CGQV L PC+ +L+ GP+ CC GV+ L AA++ DR+TAC CLK AA +I +++ AAGLPGACGV+IPYKIS STDCSKV+ Sbjct: 6 KIACFVVLCMVVVAP-HAEALSCGQVQSGLAPCLPYLQGRGPLGS-CCGGVKGLLGAAKSLSDRKTACTCLKSAANAIKGIDMGKAAGLPGACGVNIPYKISPSTDCSKVQ 114
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: SCA_LILLO (Stigma/stylar cysteine-rich adhesin OS=Lilium longiflorum GN=SCA PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.544e-28 Identity = 67/117 (57.26%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 24 MAALKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNA--AGLPGACGVSIPYKISTSTDCSKVR 368 MA V LLL + G +A AITCGQV L C+G+ R GG IP CC GVR+LN A+TTPDRQTACNCLK PSL LN A AG+PG CGV+IPY I TDC+KVR Sbjct: 1 MARSSAVCFLLLLAFLIG--TASAITCGQVDSDLTSCLGYARKGGVIPPGCCAGVRTLNNLAKTTPDRQTACNCLKSLVN--PSLGLNAAIVAGIPGKCGVNIPYPIRMQTDCNKVR 113
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.629e-28 Identity = 60/110 (54.55%), Postives = 76/110 (69.09%), Query Frame = 3 Query: 39 LVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 + +A++ +L+ S AI+CGQV+ ++ PCI + R G P CC+GVRSLN AARTT DR+ ACNCLK AA + LN NAA +P CGVSIPY ISTSTDCS+V Sbjct: 10 VATAVVALVLLAAATSEAAISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV 119
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP3_LENCU (Non-specific lipid-transfer protein 3 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.629e-28 Identity = 58/107 (54.21%), Postives = 76/107 (71.03%), Query Frame = 3 Query: 48 ALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 AL++CM+V P++ A++CG V+G L PCI +L G CC GV+ L AAA TT DRQ ACNCLK AA +I +LN NAA LPG C V+IPYKIST+T+C+ ++ Sbjct: 11 ALVMCMVVIAPMAEAAVSCGTVTGDLAPCIPYLTGGAGPTDSCCAGVKKLLAAAPTTADRQAACNCLKTAAGNINNLNPGNAAALPGKCNVNIPYKISTTTNCNTIK 117
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP4_ARATH (Non-specific lipid-transfer protein 4 OS=Arabidopsis thaliana GN=LTP4 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.045e-28 Identity = 60/114 (52.63%), Postives = 80/114 (70.18%), Query Frame = 3 Query: 30 ALKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSI-PSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 AL+ + +L + + + A AITCG V+ SL PC+G+L GG +P PCC GV+ LN A+TTPDRQ AC CL+ AA+ + PSL A+GLPG CGVSIPY ISTST+C+ ++ Sbjct: 4 ALRFFTCFVLTVFIVASVDA-AITCGTVASSLSPCLGYLSKGGVVPPPCCAGVKKLNGMAQTTPDRQQACRCLQSAAKGVNPSL----ASGLPGKCGVSIPYPISTSTNCATIK 112
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP1_SORBI (Non-specific lipid-transfer protein 1 OS=Sorghum bicolor GN=LTP1 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.045e-28 Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 3 Query: 30 ALKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 A+ +V+A+++ + T S AI+CGQVS ++ C+ + R G P CC+GVRSLN+AARTT DR+ ACNCLK AAR I LN NAA +P CGVS+PY ISTSTDCS+V Sbjct: 7 AIAVVAAVVVVLAAT--TSEAAISCGQVSSAIALCLSYARGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGISGLNAGNAASIPSKCGVSVPYTISTSTDCSRV 117
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.045e-28 Identity = 59/111 (53.15%), Postives = 80/111 (72.07%), Query Frame = 3 Query: 36 KLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 K+ +LLCM+V P A+A+TCGQV+ L PC+ +L+ GP+ CC GV++L +A+TT DR+TAC CLK AA +I ++LN AAG+P C V+IPYKIS STDCS V+ Sbjct: 6 KIACFVLLCMVVVAP-HAEALTCGQVTAGLAPCLPYLQGRGPLG-GCCGGVKNLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP1_LENCU (Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.045e-28 Identity = 62/118 (52.54%), Postives = 85/118 (72.03%), Query Frame = 3 Query: 24 MAALKL--VSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 MA+L++ + AL+ ++++ P++ AI+CG VSG+L PC+ +L+ GGP P P CC GV+ LN AARTT DR+ ACNCLK +A SI L N A LPG CGV +PY ISTST+C+ +R Sbjct: 1 MASLRVSCLVALMCMVVISAPMAEAAISCGTVSGALVPCLTYLK-GGPGPSPQCCGGVKRLNGAARTTIDRRAACNCLKSSAGSISGLKPGNVATLPGKCGVRLPYTISTSTNCNTIR 117 The following BLAST results are available for this feature:
BLAST of CF835381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835381 ID=CF835381; Name=CF835381; organism=Citrus sinensis; type=EST; length=623bpback to top |