CF835381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.407e-18 Identity = 44/94 (46.81%), Postives = 60/94 (63.83%), Query Frame = 3 Query: 93 AITCGQVSGSLPPCIGFLRSGGPIPMP--CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 A+TC V+ +L PC+ +L+ G P P CC GVRSL AAA+T DR+ ACNC+K AA+ SLN AA L CGV + Y +S + +C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.674e-18 Identity = 47/106 (44.34%), Postives = 65/106 (61.32%), Query Frame = 3 Query: 51 LLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGG-PIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 L++ +L+ +AI C QV+ L C+ +L++GG P PM CCNG+ SL AAA DRQ ACNCLK A +IP +N + A LP CGV+I S + DC+ + Sbjct: 14 LVITILLGIAYHGEAIACPQVNMYLAQCLPYLKAGGNPSPM-CCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 6.933e-16 Identity = 43/107 (40.19%), Postives = 61/107 (57.01%), Query Frame = 3 Query: 54 LLCMLVTGPLSAQ---AITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 +L M+V L AITC V+G+L PC+ +LRSGG CC G + L A RT DR+TAC C K AA + + + A+ LPG CG+S I+ + +C+ + Sbjct: 10 ILAMIVMAQLMVHPSVAITCNDVTGNLTPCLPYLRSGGKPTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQL-KVRPDMASSLPGKCGISTSIPINPNVNCNTI 115
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTPA_RICCO (Non-specific lipid-transfer protein A OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.708e-14 Identity = 39/91 (42.86%), Postives = 53/91 (58.24%), Query Frame = 3 Query: 96 ITCGQVSGSLPPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 + CGQV+ SL CI FL G P CC GV++L A T+ DR+ AC C+K AA P++ + A+ LP CGV I IS +T+C + Sbjct: 1 VDCGQVNSSLASCIPFLTGGVASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTNCQAI 91
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP_PINTA (Non-specific lipid-transfer protein OS=Pinus taeda PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.913e-14 Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = 3 Query: 24 MAALKLVSALLLCMLVTGPLSAQ-------AITCGQVSGSLPPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVS-IPYKISTSTDCSKV 365 MA K+V A+ + LV ++ AI+C QV ++ PC +L P CC +R L++ + TPDRQ CNCLK A+S + L AA LPG C V+ + IS + DCSKV Sbjct: 1 MAVKKMVEAVFVVGLVVTMMNVWGAVPVEGAISCNQVVSAMTPCATYLIGNAATPAATCCPSIRGLDSQVKATPDRQAVCNCLKTQAKSY-GVKLGKAANLPGLCKVTDLNVPISPNVDCSKV 122
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP8_ARATH (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana GN=LTP8 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.466e-13 Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = 3 Query: 84 SAQAITCGQVSGSLPPCIGFLRSG-GPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 S AI+C V L PC+ +L SG G P CC+GV+SL AA T+ D++ AC C+K A S+ ++ A L CG S+P S + DC+ V Sbjct: 22 SESAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKKAACQCIKSVANSV-TVKPELAQALASNCGASLPVDASPTVDCTTV 115
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTPB_RICCO (Non-specific lipid-transfer protein B OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.073e-12 Identity = 35/91 (38.46%), Postives = 51/91 (56.04%), Query Frame = 3 Query: 96 ITCGQVSGSLPPCIGFLRSGGPIP-MPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 + CGQV+ +L C+ FL P + CC GV L A T D++ AC C+K AA P++ + A+ LP CGV I IS +T+C ++ Sbjct: 1 VNCGQVNKALSSCVPFLTGFDTTPSLTCCAGVMELKRLAPTVKDKRIACECVKTAAARYPNIREDAASSLPYKCGVVINVPISKTTNCHEI 91 The following BLAST results are available for this feature:
BLAST of CF835381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835381 ID=CF835381; Name=CF835381; organism=Citrus sinensis; type=EST; length=623bpback to top |