CF835382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_MOUSE (Eukaryotic translation initiation factor 6 OS=Mus musculus GN=Eif6 PE=1 SV=2) HSP 1 Score: 343.584 bits (880), Expect = 5.699e-94 Identity = 168/223 (75.34%), Postives = 193/223 (86.55%), Query Frame = 2 Query: 2 SCEVAFFSKLTNAFCLVAIGGSESFYSTFQAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAI 670 +CEV F+KLTNA+CLVAIGGSE+FYS F+ EL+D IPVV SI G RIIGR+CVGN++GLL+P+ TTDQELQH+RNSLPD V ++R+EERLSALGN CND+VAL H LDRETEEI+ADVL VEVFRQTVA +LVGSYC FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVI AG+ VNDW AFCG DTT+TELSV+ESVFKL EA+P+ I Sbjct: 10 NCEVGCFAKLTNAYCLVAIGGSENFYSVFEGELSDAIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQELQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTI 232
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_HUMAN (Eukaryotic translation initiation factor 6 OS=Homo sapiens GN=EIF6 PE=1 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 9.721e-94 Identity = 167/223 (74.89%), Postives = 192/223 (86.10%), Query Frame = 2 Query: 2 SCEVAFFSKLTNAFCLVAIGGSESFYSTFQAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAI 670 +CE+ F+KLTN +CLVAIGGSE+FYS F+ EL+D IPVV SI G RIIGR+CVGN++GLL+P+ TTDQELQH+RNSLPD V ++R+EERLSALGN CND+VAL H LDRETEEI+ADVL VEVFRQTVA +LVGSYC FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVI AG+ VNDW AFCG DTT+TELSV+ESVFKL EAQP+ I Sbjct: 10 NCEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQELQHIRNSLPDTVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTI 232
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_BOVIN (Eukaryotic translation initiation factor 6 OS=Bos taurus GN=EIF6 PE=2 SV=2) HSP 1 Score: 340.117 bits (871), Expect = 6.301e-93 Identity = 166/223 (74.44%), Postives = 191/223 (85.65%), Query Frame = 2 Query: 2 SCEVAFFSKLTNAFCLVAIGGSESFYSTFQAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAI 670 +CE+ F+KLTN++CLVAIGGSE+FYS F+ ELA IPVV SI G RIIGR+CVGN++GLL+P+ TTDQELQH+RN LPD V ++R+EERLSALGN CND+VAL H LDRETEEI+ADVL VEVFRQTVA +LVGSYC FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVI AG+ VNDW AFCG DTT+TELSV+ESVFKL EAQP+ I Sbjct: 10 NCEIGCFAKLTNSYCLVAIGGSENFYSVFEGELAGTIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQELQHIRNCLPDSVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTI 232
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_SCHPO (Eukaryotic translation initiation factor 6 OS=Schizosaccharomyces pombe GN=tif6 PE=2 SV=1) HSP 1 Score: 332.798 bits (852), Expect = 1.006e-90 Identity = 161/224 (71.88%), Postives = 193/224 (86.16%), Query Frame = 2 Query: 2 SCEVAFFSKLTNAFCLVAIGGSESFYSTFQAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAIV 673 S E+ FS LTN++ LVA+GGSE+FYS F+AEL DV+PVV T+IGG RIIGRL GN+ GLL+P +TTD ELQHLRNSLPD V +QR++ERLSALGN +ACND+VAL H ++RETEEIIADVL VEVFRQTVAGN+L GSYC+ SN+G LVHP TSI++ DELS+LLQVPLVAGT+NRGS+VIGAGL VNDW AF G DTTATEL+V ES+FKL++AQP+AI+ Sbjct: 10 SNEIGVFSNLTNSYALVALGGSENFYSVFEAELGDVVPVVHTTIGGTRIIGRLTCGNRKGLLVPSSTTDNELQHLRNSLPDPVKIQRVDERLSALGNIVACNDYVALVHPDIERETEEIIADVLDVEVFRQTVAGNVLTGSYCALSNQGALVHPRTSIQEQDELSSLLQVPLVAGTINRGSDVIGAGLVVNDWCAFAGLDTTATELAVCESIFKLQDAQPSAII 233
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_YEAST (Eukaryotic translation initiation factor 6 OS=Saccharomyces cerevisiae GN=TIF6 PE=1 SV=1) HSP 1 Score: 329.717 bits (844), Expect = 8.516e-90 Identity = 159/223 (71.30%), Postives = 190/223 (85.20%), Query Frame = 2 Query: 2 SCEVAFFSKLTNAFCLVAIGGSESFYSTFQAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAI 670 S E+ FSKLTN +CLVA+GGSE+FYS F+AEL D IP+V T+I G RIIGR+ GN+ GLL+P TTDQELQHLRNSLPD V +QR+EERLSALGN I CND+VAL H +DRETEE+I+DVLGVEVFRQT++GNILVGSYCS SN+GGLVHP TS++D +ELS+LLQVPLVAGTVNRGS V+GAG+ VND+ A G DTTA ELSVIES+F+L++AQP +I Sbjct: 10 SNEIGVFSKLTNTYCLVAVGGSENFYSAFEAELGDAIPIVHTTIAGTRIIGRMTAGNRRGLLVPTQTTDQELQHLRNSLPDSVKIQRVEERLSALGNVICCNDYVALVHPDIDRETEELISDVLGVEVFRQTISGNILVGSYCSLSNQGGLVHPQTSVQDQEELSSLLQVPLVAGTVNRGSSVVGAGMVVNDYLAVTGLDTTAPELSVIESIFRLQDAQPESI 232
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_DROME (Probable eukaryotic translation initiation factor 6 OS=Drosophila melanogaster GN=eIF6 PE=2 SV=3) HSP 1 Score: 324.324 bits (830), Expect = 3.578e-88 Identity = 159/221 (71.95%), Postives = 188/221 (85.07%), Query Frame = 2 Query: 8 EVAFFSKLTNAFCLVAIGGSESFYSTFQAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAI 670 ++ F+KLTN +CLVAIGGSE+FYS F+AEL D IPVV ++GG RIIGRL VGN+NGLL+P++TTD+ELQHLRNSLPD V + R+EERLSALGN IACND+VAL H LD+ETEEIIADVL VEVFRQT+A N LVGSY SN+GG+VHP TSI+D DELS+LLQVPLVAGTVNRGSEV+ AG+ VNDW +F G +TTATE+SVIESVFKL +AQP + Sbjct: 12 DIGVFTKLTNTYCLVAIGGSETFYSAFEAELGDTIPVVHANVGGCRIIGRLTVGNRNGLLVPNSTTDEELQHLRNSLPDAVKIYRVEERLSALGNVIACNDYVALVHPDLDKETEEIIADVLKVEVFRQTIADNSLVGSYAVLSNQGGMVHPKTSIQDQDELSSLLQVPLVAGTVNRGSEVLAAGMVVNDWLSFVGMNTTATEISVIESVFKLNQAQPATV 232
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_ARATH (Eukaryotic translation initiation factor 6 OS=Arabidopsis thaliana GN=At2g39820 PE=2 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 2.835e-85 Identity = 152/224 (67.86%), Postives = 190/224 (84.82%), Query Frame = 2 Query: 2 SCEVAFFSKLTNAFCLV-AIGGSESFYSTFQAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAI 670 +CE+ FSKLTNA+CLV A S +F++ ++++L VIP+V TSIGG+ IG LCVGNKNGLLL HT TDQELQHLR+SLPD+VVVQRIEE + ALGN IACND+VAL H L+++TEEII+DVLGVEV+RQT+A N LVGSYCS SN GG+VH +T++E++ EL+ L+QVPLVAGTVNRGS+VI AGLTVNDWTAFCGSDTTA ELSV+ ++FKL ++QP+ + Sbjct: 11 NCEIGVFSKLTNAYCLVSATSASANFFTGYESKLKGVIPIVTTSIGGSGTIGSLCVGNKNGLLLSHTITDQELQHLRDSLPDEVVVQRIEEPICALGNAIACNDYVALVHPKLEKDTEEIISDVLGVEVYRQTIANNELVGSYCSLSNNGGMVHSNTNVEEMVELANLVQVPLVAGTVNRGSQVISAGLTVNDWTAFCGSDTTAVELSVVNNIFKLVQSQPDFV 234
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_DICDI (Probable eukaryotic translation initiation factor 6 OS=Dictyostelium discoideum GN=eif6 PE=3 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 3.703e-85 Identity = 156/225 (69.33%), Postives = 185/225 (82.22%), Query Frame = 2 Query: 2 SCEVAFFSKLTNAFCLVAIGGSESFYSTFQAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAIVD 676 SC+V F KLTN +CLV GS+ F T + LAD IPVV+TSI G RI+GRL GNKNGLLLP+T TDQELQ +RNSLPD VVVQRIEE+ SALGNCIA ND+VAL H +DRETEEIIADVLGVEVFRQTV+GN+LVG+YC+ +N+G LVHP TSI D DELS+LLQVPLVAGTVNRG+E + AG VNDWTA G+DTTATE+SVIES+F L+ ++P+ I++ Sbjct: 10 SCDVGVFLKLTNKYCLVGQCGSKQFLHTVENRLADHIPVVETSIAGTRIVGRLSAGNKNGLLLPNTCTDQELQQIRNSLPDDVVVQRIEEKFSALGNCIATNDYVALVHPDIDRETEEIIADVLGVEVFRQTVSGNVLVGTYCALTNQGALVHPMTSIADQDELSSLLQVPLVAGTVNRGNECVAAGCVVNDWTAIVGADTTATEISVIESIFALQGSKPSNIIN 234
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_BETVU (Eukaryotic translation initiation factor 6 (Fragment) OS=Beta vulgaris PE=2 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 6.983e-84 Identity = 154/184 (83.70%), Postives = 167/184 (90.76%), Query Frame = 2 Query: 2 SCEVAFFSKLTNAFCLVAIGGSESFYSTFQAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI 553 +CEV FSKLTNA+CLVAIGGSE+FYSTF+ ELAD IPVVKTSI G RIIG NKNGLL+PHTTTDQELQHLRN LPD VVVQRIEE+LSALGNCIACND+VAL HT LD+ETEE+IADVLGVEVF QT+AGNILVGSYC+ +N+GGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI Sbjct: 10 NCEVGVFSKLTNAYCLVAIGGSENFYSTFETELADYIPVVKTSIAGTRIIGPNVCRNKNGLLVPHTTTDQELQHLRNCLPDSVVVQRIEEKLSALGNCIACNDYVALTHTDLDKETEELIADVLGVEVFGQTIAGNILVGSYCAITNKGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI 193
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_CAEEL (Eukaryotic translation initiation factor 6 OS=Caenorhabditis elegans GN=eif-6 PE=2 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 1.724e-74 Identity = 134/217 (61.75%), Postives = 172/217 (79.26%), Query Frame = 2 Query: 2 SCEVAFFSKLTNAFCLVAIGGSESFYSTFQAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLRE 652 S +V F LTN++CLV +GG+++FYS +AEL+D+IPVV TSI RI+GRL VGN++GLL+P+ TTDQELQHLRNSLPD+V ++R++ERLSALGN IACNDHVA+ H + ETE+ + +VL VEVFR ++A N LVGSYC S+ G LV T E E++ LLQ+P+VAGT NRGSE+IGAG+ VNDW AFCG D+T+TELSV+ES+FKL E Sbjct: 10 SNDVGVFCTLTNSYCLVGVGGTQNFYSILEAELSDLIPVVHTSIASTRIVGRLTVGNRHGLLVPNATTDQELQHLRNSLPDEVAIRRVDERLSALGNVIACNDHVAIVHAEISAETEQALVEVLKVEVFRVSLAQNSLVGSYCILSSNGCLVAARTPPETQREIAALLQIPVVAGTCNRGSELIGAGMVVNDWVAFCGLDSTSTELSVVESIFKLGE 226 The following BLAST results are available for this feature:
BLAST of CF835382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835382 ID=CF835382; Name=CF835382; organism=Citrus sinensis; type=EST; length=676bpback to top |