CF835406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.630e-25 Identity = 52/87 (59.77%), Postives = 60/87 (68.97%), Query Frame = -1 Query: 187 TGSLAPCIVYLRSGGPIPVP--CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 441 T SLAPCI YLR G VP CC G++SLN+AA+TTP RQ AC C+K AA I +N A GLP CGV+IPYKIS STDC V+ Sbjct: 30 TNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 116 HSP 2 Score: 30.4166 bits (67), Expect = 7.630e-25 Identity = 14/27 (51.85%), Postives = 19/27 (70.37%), Query Frame = -3 Query: 446 ALKLVSALVLCMLVIGPLSGQAITCGQ 526 +LKL +VLCM+V PL+ A+T GQ Sbjct: 2 SLKLACVVVLCMVVGAPLAQGAVTSGQ 28
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 9.931e-25 Identity = 49/81 (60.49%), Postives = 59/81 (72.84%), Query Frame = -1 Query: 199 TGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDC 441 + LAPCI YL+ GGP+ CC G+++LNAAA TTPDR+TACNCLK AA +I +N A GLP CGV IPY IS ST+C Sbjct: 34 SSKLAPCIGYLK-GGPLGGGCCGGIKALNAAAATTPDRKTACNCLKSAANAIKGINYGKAAGLPGMCGVHIPYAISPSTNC 113 HSP 2 Score: 30.0314 bits (66), Expect = 9.931e-25 Identity = 12/27 (44.44%), Postives = 18/27 (66.67%), Query Frame = -3 Query: 449 AALKLVSALVLCMLVIGPLSGQAITCG 529 A +KL A++LC++V P + ITCG Sbjct: 5 AVIKLACAVLLCIVVAAPYAEAGITCG 31
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP5_LENCU (Non-specific lipid-transfer protein 5 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.943e-24 Identity = 55/86 (63.95%), Postives = 63/86 (73.26%), Query Frame = -1 Query: 187 TGSLAPCIVYLRSGGPIPVP-CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 441 TG L+PC+ YL +GGP P P CC GV+ L AAA TTPDRQ ACNC+K AA SI LN NNA LP CGV+IPYKIS ST+C V+ Sbjct: 32 TGDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCMKSAASSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 116
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTPA_BRAOT (Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.253e-24 Identity = 46/84 (54.76%), Postives = 61/84 (72.62%), Query Frame = -1 Query: 187 SLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSI-PNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 435 ++APCI Y+ GG +P CC GV LN+ ARTTPDRQ AC CL+ AA ++ PNLN A G+P+ACGVS+P+ IS +T+C V+ Sbjct: 35 NVAPCIGYITQGGTLPGACCTGVSKLNSMARTTPDRQQACRCLETAARALGPNLNAGRAAGIPKACGVSVPFPISTNTNCNNVK 118 HSP 2 Score: 27.7202 bits (60), Expect = 6.253e-24 Identity = 11/26 (42.31%), Postives = 19/26 (73.08%), Query Frame = -3 Query: 449 LKLVSALVLCMLVIGPL-SGQAITCG 523 +KL ++ CM+V GP+ + +A+TCG Sbjct: 5 MKLACLVLACMIVAGPITANRALTCG 30
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTPD_BRAOT (Non-specific lipid-transfer protein D OS=Brassica oleracea var. italica GN=WAX9D PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.138e-24 Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = -1 Query: 187 TGSLAPCIVYLRSGGP-IPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 441 +G +APCI YL P +P CC+GV SLN ARTTPDRQ AC CL AA ++P +N A GLP+ACGV+IPYKIS +T+C V+ Sbjct: 33 SGYVAPCIGYLAQNAPAVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 118 HSP 2 Score: 26.1794 bits (56), Expect = 8.138e-24 Identity = 11/26 (42.31%), Postives = 17/26 (65.38%), Query Frame = -3 Query: 449 LKLVSALVLCMLVIGPL-SGQAITCG 523 +KL + CM+V GP+ S A++CG Sbjct: 5 MKLACLIFACMIVAGPITSNAALSCG 30
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 8.138e-24 Identity = 48/84 (57.14%), Postives = 63/84 (75.00%), Query Frame = -1 Query: 187 SLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSI-PNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 435 +LA CI Y+ GG IP CC+GV++LN+ A+TTPDRQ ACNC++ AA ++ LN A G+P+ACGV+IPYKIS ST+C VR Sbjct: 35 NLAACIGYVLQGGVIPPACCSGVKNLNSIAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118 HSP 2 Score: 27.7202 bits (60), Expect = 8.138e-24 Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = -3 Query: 449 LKLVSALVLCMLVIGPL-SGQAITCG 523 +KL L+ CM+V GP+ S A++CG Sbjct: 5 MKLACLLLACMIVAGPITSNAALSCG 30
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 9.642e-24 Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = -1 Query: 190 TGSLAPCIVYLRSGGPIPVP--CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKV 441 TG+LAPC+ YLRS +PVP CCN VR LN AARTT D++TAC CLKQ A ++ LN N A GLP CGV+IPYKIS +TDC +V Sbjct: 34 TGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP3_ARATH (Non-specific lipid-transfer protein 3 OS=Arabidopsis thaliana GN=LTP3 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.645e-23 Identity = 49/84 (58.33%), Postives = 61/84 (72.62%), Query Frame = -1 Query: 187 GSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 438 GSLAPC YL GG +P CC GV++LN+ A+TTPDRQ AC C++ A SI LNP+ A GLP CGVSIPY IS+ST+C ++ Sbjct: 32 GSLAPCATYLSKGGLVPPSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNIK 115
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.734e-23 Identity = 46/82 (56.10%), Postives = 54/82 (65.85%), Query Frame = -1 Query: 190 SLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKV 435 ++ PC+ Y R G CC+GVRSL AAA TT DR+TACNCLK AA I LN NA +P CGVS+PY IS S DC +V Sbjct: 34 AVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115 HSP 2 Score: 26.9498 bits (58), Expect = 6.734e-23 Identity = 16/36 (44.44%), Postives = 22/36 (61.11%), Query Frame = -3 Query: 428 MAALKLVS-ALVLCMLVIGPLSGQAITCGQGDWLIG 532 MA +LV ALV +L+ P + AITCGQ + +G Sbjct: 1 MARAQLVLVALVAALLLAAPHAAVAITCGQVNSAVG 36
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.734e-23 Identity = 46/82 (56.10%), Postives = 54/82 (65.85%), Query Frame = -1 Query: 190 SLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKV 435 ++ PC+ Y R G CC+GVRSL AAA TT DR+TACNCLK AA I LN NA +P CGVS+PY IS S DC +V Sbjct: 34 AVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115 HSP 2 Score: 26.9498 bits (58), Expect = 6.734e-23 Identity = 16/36 (44.44%), Postives = 22/36 (61.11%), Query Frame = -3 Query: 428 MAALKLVS-ALVLCMLVIGPLSGQAITCGQGDWLIG 532 MA +LV ALV +L+ P + AITCGQ + +G Sbjct: 1 MARAQLVLVALVAALLLAAPHAAVAITCGQVNSAVG 36 The following BLAST results are available for this feature:
BLAST of CF835406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835406 ID=CF835406; Name=CF835406; organism=Citrus sinensis; type=EST; length=561bpback to top |