CF835406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP2_SORBI (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.464e-21 Identity = 48/85 (56.47%), Postives = 57/85 (67.06%), Query Frame = -1 Query: 190 TGSLAPCIVYLRSGGPIP-VPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKV 441 + ++ PC+ Y R G P CC+GVRSLN+AARTT DR+ ACNCLK AA I LN A +P CGVSIPY IS STDC +V Sbjct: 37 SSAIGPCLSYARGQGSGPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTDCSRV 121 HSP 2 Score: 22.7126 bits (47), Expect = 3.464e-21 Identity = 12/41 (29.27%), Postives = 19/41 (46.34%), Query Frame = -3 Query: 428 LRRKSQMAALKLVSALVLCMLVIGPLSGQAITCGQGDWLIG 550 + R ++A V A +++ S A+TCGQ IG Sbjct: 1 MARSMKLAVAIAVVAAAAAVVLAATTSEAAVTCGQVSSAIG 41
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP4_ARATH (Non-specific lipid-transfer protein 4 OS=Arabidopsis thaliana GN=LTP4 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.479e-21 Identity = 47/83 (56.63%), Postives = 58/83 (69.88%), Query Frame = -1 Query: 187 SLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 435 SL+PC+ YL GG +P PCC GV+ LN A+TTPDRQ AC CL+ AA + NP+ A GLP CGVSIPY IS ST+C ++ Sbjct: 33 SLSPCLGYLSKGGVVPPPCCAGVKKLNGMAQTTPDRQQACRCLQSAAKGV---NPSLASGLPGKCGVSIPYPISTSTNCATIK 112
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP1_SORBI (Non-specific lipid-transfer protein 1 OS=Sorghum bicolor GN=LTP1 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.303e-20 Identity = 48/85 (56.47%), Postives = 58/85 (68.24%), Query Frame = -1 Query: 190 TGSLAPCIVYLRSGGPIP-VPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKV 441 + ++A C+ Y R G P CC+GVRSLN+AARTT DR+ ACNCLK AA I LN NA +P CGVS+PY IS STDC +V Sbjct: 33 SSAIALCLSYARGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGISGLNAGNAASIPSKCGVSVPYTISTSTDCSRV 117
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.223e-20 Identity = 49/85 (57.65%), Postives = 57/85 (67.06%), Query Frame = -1 Query: 187 GSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSI-PNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 438 G+LA CI YL G P+ CCNGV +L A TTPDRQ AC CL+ AA ++ P LN A GLP AC V+IPYKIS ST+C VR Sbjct: 34 GNLAGCIAYLTRGAPLTQGCCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP3_VITSX (Non-specific lipid-transfer protein P3 OS=Vitis sp. PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 3.792e-20 Identity = 46/81 (56.79%), Postives = 57/81 (70.37%), Query Frame = -1 Query: 190 LAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKV 432 +A CI YLR GP+P CCNGV++L +A TT DR+TAC CL A+ +I +N A GLP CGVSIPYKIS ST+C +V Sbjct: 10 MASCINYLRGAGPLPAACCNGVKNLKNSATTTQDRRTACKCLISASKTISGVNFGLAAGLPAKCGVSIPYKISPSTNCDQV 90
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: SCA_LILLO (Stigma/stylar cysteine-rich adhesin OS=Lilium longiflorum GN=SCA PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.468e-20 Identity = 46/82 (56.10%), Postives = 52/82 (63.41%), Query Frame = -1 Query: 187 LAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 432 L C+ Y R GG IP CC GVR+LN A+TTPDRQTACNCLK LN G+P CGV+IPY I + TDC KVR Sbjct: 32 LTSCLGYARKGGVIPPGCCAGVRTLNNLAKTTPDRQTACNCLKSLVNPSLGLNAAIVAGIPGKCGVNIPYPIRMQTDCNKVR 113
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLLC (Non-specific lipid-transfer protein 2 OS=Solanum lycopersicum GN=LE16 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.447e-20 Identity = 47/85 (55.29%), Postives = 56/85 (65.88%), Query Frame = -1 Query: 187 TGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 441 T LAPC+ YL GP+ CC GV+ L AA+T DR+TAC CLK AA SI ++ A GLP CGV+IPYKIS STDC V+ Sbjct: 31 TSGLAPCLPYLEGRGPLG-GCCGGVKGLLGAAKTPEDRKTACTCLKSAANSIKGIDTGKAAGLPGVCGVNIPYKISPSTDCSTVQ 114
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.103e-19 Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = -1 Query: 187 LAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 432 LAPC+ YL+ GP+ CC GV+ L AA++ DR+TAC CLK AA +I ++ A GLP ACGV+IPYKIS STDC KV+ Sbjct: 34 LAPCLPYLQGRGPLG-SCCGGVKGLLGAAKSLSDRKTACTCLKSAANAIKGIDMGKAAGLPGACGVNIPYKISPSTDCSKVQ 114
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.882e-19 Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = -1 Query: 187 TGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 441 T LAPC+ YL+ GP+ CC GV++L +A+TT DR+TAC CLK AA +I ++ N A G+P C V+IPYKIS STDC V+ Sbjct: 31 TAGLAPCLPYLQGRGPLG-GCCGGVKNLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.458e-19 Identity = 45/85 (52.94%), Postives = 58/85 (68.24%), Query Frame = -1 Query: 187 TGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 441 T LAPC+ YL+ GP+ CC GV+ L +A+TT DR+TAC CLK AA +I ++ N A G+P C V+IPYKIS STDC V+ Sbjct: 31 TAGLAPCLPYLQGRGPLG-GCCGGVKGLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114 The following BLAST results are available for this feature:
BLAST of CF835406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835406 ID=CF835406; Name=CF835406; organism=Citrus sinensis; type=EST; length=561bpback to top |