CF835435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835435 vs. ExPASy Swiss-Prot
Match: PGRC1_HUMAN (Membrane-associated progesterone receptor component 1 OS=Homo sapiens GN=PGRMC1 PE=1 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 1.846e-16 Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 3 Query: 48 EFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPGGAYAMFAGKDASRALAKMSKNDD---DVTPSLDGLTEKEMGVLSDWEKKFEAKYPVVGRVV 341 +FTPA+L +++G + I +AI G+VFDVT G+ FYGP G Y +FAG+DASR LA + + D L LT + LSDWE +F KY VG+++ Sbjct: 72 DFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQQETLSDWESQFTFKYHHVGKLL 171
BLAST of CF835435 vs. ExPASy Swiss-Prot
Match: PGRC1_RAT (Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus GN=Pgrmc1 PE=1 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 3.149e-16 Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = 3 Query: 48 EFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPGGAYAMFAGKDASRALAKMSKNDD---DVTPSLDGLTEKEMGVLSDWEKKFEAKYPVVGRVV 341 +FTPA+L +Y+G + I +AI G+VFDVT G+ FYGP G Y +FAG+DASR LA + + D L LT + L+DW+ +F KY VG+++ Sbjct: 72 DFTPAELRRYDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKLL 171
BLAST of CF835435 vs. ExPASy Swiss-Prot
Match: PGRC1_MOUSE (Membrane-associated progesterone receptor component 1 OS=Mus musculus GN=Pgrmc1 PE=1 SV=4) HSP 1 Score: 84.3445 bits (207), Expect = 4.113e-16 Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = 3 Query: 48 EFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPGGAYAMFAGKDASRALAKMSKNDD---DVTPSLDGLTEKEMGVLSDWEKKFEAKYPVVGRVV 341 +FTPA+L +++G + I +AI G+VFDVT G+ FYGP G Y +FAG+DASR LA + + D L LT + LSDW+ +F KY VG+++ Sbjct: 72 DFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKLL 171
BLAST of CF835435 vs. ExPASy Swiss-Prot
Match: PGRC1_BOVIN (Membrane-associated progesterone receptor component 1 OS=Bos taurus GN=PGRMC1 PE=2 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 4.113e-16 Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = 3 Query: 48 EFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPGGAYAMFAGKDASRALAKMSKNDD---DVTPSLDGLTEKEMGVLSDWEKKFEAKYPVVGRVV 341 +FTPA+L +++G + I +AI G+VFDVT G+ FYGP G Y +FAG+DASR LA + + D L LT + LSDW+ +F KY VG+++ Sbjct: 71 DFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKLL 170
BLAST of CF835435 vs. ExPASy Swiss-Prot
Match: CB5D2_CAEBR (Cytochrome b5 domain-containing protein 2 homolog OS=Caenorhabditis briggsae GN=tag-131 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.372e-16 Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 3 Query: 51 FTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPGGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTEKEMGVLSDWEKKFEAKYPVVGRV 338 FTP QL ++G+ SKP Y+AI GRV+DV K +YGPG +Y FAG+DA+RA ++ + S GL+ E+ + DW ++ +YP+VG V Sbjct: 101 FTPEQLHFFDGSRDSKPCYLAILGRVYDVDGKKEYYGPGKSYHHFAGRDATRAFTTGDFTENGLVASTHGLSHDELLSIRDWVSFYDKEYPLVGVV 196
BLAST of CF835435 vs. ExPASy Swiss-Prot
Match: CB5D2_CAEEL (Cytochrome b5 domain-containing protein 2 homolog OS=Caenorhabditis elegans GN=tag-131 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.015e-16 Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 3 Query: 51 FTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPGGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTEKEMGVLSDWEKKFEAKYPVVGRV 338 FTP QL ++GT SKPIY+AI GRV++V K +YGPG +Y FAG+DA+RA + + + GL+ E+ + DW ++ +YP+VG V Sbjct: 101 FTPEQLHFFDGTRDSKPIYLAILGRVYNVDGKKEYYGPGKSYHHFAGRDATRAFTTGDFQESGLIATTHGLSHDELLSIRDWVSFYDKEYPLVGVV 196
BLAST of CF835435 vs. ExPASy Swiss-Prot
Match: PGRC1_PIG (Membrane-associated progesterone receptor component 1 OS=Sus scrofa GN=PGRMC1 PE=1 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 9.162e-16 Identity = 43/101 (42.57%), Postives = 63/101 (62.38%), Query Frame = 3 Query: 48 EFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPGGAYAMFAGKDASRALAKMSKNDD---DVTPSLDGLTEKEMGVLSDWEKKFEAKYPVVGRVV 341 +FTPA+L +++G + I +AI G+VFDVT G+ FYGP G Y +FAG+DASR LA + + D L LT + L+DW+ +F KY VG+++ Sbjct: 71 DFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKLL 170
BLAST of CF835435 vs. ExPASy Swiss-Prot
Match: PGRC2_RAT (Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus GN=Pgrmc2 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.939e-15 Identity = 42/101 (41.58%), Postives = 62/101 (61.39%), Query Frame = 3 Query: 48 EFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPGGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTE---KEMGVLSDWEKKFEAKYPVVGRVV 341 +F+ QL QY+G + I +A+ G+VFDVT G FYGP G Y +FAG+DASR LA + D + D L++ +M + +WE +F+ KY VGR++ Sbjct: 96 DFSLEQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLL 195
BLAST of CF835435 vs. ExPASy Swiss-Prot
Match: PGRC2_MOUSE (Membrane-associated progesterone receptor component 2 OS=Mus musculus GN=Pgrmc2 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 5.939e-15 Identity = 42/101 (41.58%), Postives = 62/101 (61.39%), Query Frame = 3 Query: 48 EFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPGGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTE---KEMGVLSDWEKKFEAKYPVVGRVV 341 +F+ QL QY+G + I +A+ G+VFDVT G FYGP G Y +FAG+DASR LA + D + D L++ +M + +WE +F+ KY VGR++ Sbjct: 96 DFSLEQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLL 195
BLAST of CF835435 vs. ExPASy Swiss-Prot
Match: PGRC2_HUMAN (Membrane-associated progesterone receptor component 2 OS=Homo sapiens GN=PGRMC2 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.939e-15 Identity = 42/101 (41.58%), Postives = 63/101 (62.38%), Query Frame = 3 Query: 48 EFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPGGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTE---KEMGVLSDWEKKFEAKYPVVGRVV 341 +F+ QL QY+G+ + I +A+ G+VFDVT G FYGP G Y +FAG+DASR LA + D + D L++ +M + +WE +F+ KY VGR++ Sbjct: 102 DFSLEQLRQYDGSRNPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLL 201 The following BLAST results are available for this feature:
BLAST of CF835435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835435 ID=CF835435; Name=CF835435; organism=Citrus sinensis; type=EST; length=552bpback to top |