CF835449
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835449 vs. ExPASy Swiss-Prot
Match: PR1A_HORVU (Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.434e-26 Identity = 73/203 (35.96%), Postives = 93/203 (45.81%), Query Frame = -3 Query: 73 AAKFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYK*GFCP 678 AA F+I NNC T+W A +P GGG +L GQT +I GT+A RIWART C F+ G G C+TGDC G L C G P TLAE+ + + DF D+S IDGFN+ M+FS C+ D C +C P P Y +P D +T C +Y+ FCP Sbjct: 20 AATFNIKNNCGSTIWPAGIPVGGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGQPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFS-----------CSTG------------------------DALQCRDPSCPP-----------PQAYQHPND--VATHACSGNNNYQITFCP 173
BLAST of CF835449 vs. ExPASy Swiss-Prot
Match: PRR3_JUNVI (Pathogenesis-related protein (Fragment) OS=Juniperus virginiana PE=1 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.873e-26 Identity = 53/85 (62.35%), Postives = 60/85 (70.59%), Query Frame = -3 Query: 424 AAKFDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEY 678 A KFDI N C TVWAA +PGGG++LD+GQTWT+ GT +AR W RT C FDASGKG C+TGDC L C GA P TLAEY Sbjct: 19 AVKFDIKNQCGYTVWAAGLPGGGKRLDQGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGRQLSCTVSGAVPATLAEY 103
BLAST of CF835449 vs. ExPASy Swiss-Prot
Match: TLP_WHEAT (Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26 Identity = 74/203 (36.45%), Postives = 92/203 (45.32%), Query Frame = -3 Query: 73 AAKFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYK*GFCP 678 AA F+I NNC T+W A +P GGG L GQT +I GT+A RIWART C F+ G G C+TGDC G L C G P TLAEY + + DF D+S IDGFN+ M+FS C+ D C +C P P Y +P D +T C +Y+ FCP Sbjct: 20 AATFNIKNNCGFTIWPAGIPVGGGFALGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGRPPATLAEYTIGGGSTQDFYDISVIDGFNLAMDFS-----------CSTG------------------------DALQCRDPSCPP-----------PQAYQHPND--VATHACSGNNNYQITFCP 173
BLAST of CF835449 vs. ExPASy Swiss-Prot
Match: RST4_AVESA (Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa GN=RASTL-4 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26 Identity = 74/203 (36.45%), Postives = 97/203 (47.78%), Query Frame = -3 Query: 73 AAKFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYK*GFCP 678 AA F ITNNC TVW AA+P GGG+QLD+GQTWT+ GT + RIW RT C F+ G G C+TGDC G L C G P TLAE+++ + D+ D+S ID +N+ M+FS C+ +C + CPD Y P D T +C T ++Y+ FCP Sbjct: 21 AATFTITNNCGYTVWPAAIPVGGGQQLDQGQTWTLNVPAGTNSGRIWGRTGCSFN-GGSGSCQTGDCAGALSCTLSG-QPATLAEFSIG--GEHDYYDISVIDVYNLAMDFS-----------CSTGDALQCRD-------------------------------------SSCPDAYHQPDD--PKTHSCNTNSNYQITFCP 169
BLAST of CF835449 vs. ExPASy Swiss-Prot
Match: RST1_AVESA (Thaumatin-like pathogenesis-related protein 1 OS=Avena sativa GN=RASTL-1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24 Identity = 73/203 (35.96%), Postives = 92/203 (45.32%), Query Frame = -3 Query: 73 AAKFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYK*GFCP 678 AA F ITNNC TVW A +P GGG QL+ Q+ I GT A RIW RT C F+ +G+G C TGDC G L C G P TLAEY + DF D+S IDGFN+ M+FS C+ + +C + CPD Y +P D +T C ++Y+ FCP Sbjct: 21 AATFRITNNCGFTVWPAGIPVGGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG-QPATLAEYTIG--GSQDFYDISVIDGFNLAMDFS-----------CSTGVALKCRDA-------------------------------------NCPDAYHHPND--VATHACNGNSNYQITFCP 169
BLAST of CF835449 vs. ExPASy Swiss-Prot
Match: RST3_AVESA (Thaumatin-like pathogenesis-related protein 3 OS=Avena sativa GN=RASTL-3 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.484e-23 Identity = 76/203 (37.44%), Postives = 95/203 (46.80%), Query Frame = -3 Query: 73 AAKFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYK*GFCP 678 AA F ITNNC TVW A +P GGG QL+ Q+ I GT A RIW RT C F+ +G+G C TGDC G L C G P TLAEY + DF D+S IDG+N+ M+FS C+ + LK C +SG CPD Y +P D +T C ++Y+ FCP Sbjct: 21 AATFRITNNCGFTVWPAGIPVGGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG-QPATLAEYTIG--GSQDFYDISVIDGYNLAMDFS-----------CSTGV------ALK-----------------CRDSG--------------CPDAYHHPND--VATHACNGNSNYQITFCP 169
BLAST of CF835449 vs. ExPASy Swiss-Prot
Match: RST2_AVESA (Thaumatin-like pathogenesis-related protein 2 OS=Avena sativa GN=RASTL-2 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.484e-23 Identity = 72/203 (35.47%), Postives = 92/203 (45.32%), Query Frame = -3 Query: 73 AAKFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYK*GFCP 678 AA F ITNNC TVW A +P GGG QL+ Q+ I GT A RIW RT C F+ +G+G C TGDC G L C G P TLAEY + DF D+S IDG+N+ M+FS C+ + +C + CPD Y +P D +T C ++Y+ FCP Sbjct: 21 AATFRITNNCGFTVWPAGIPVGGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG-QPATLAEYTIG--GSQDFYDISVIDGYNLAMDFS-----------CSTGVALKCRDA-------------------------------------NCPDAYHHPND--VATHACNGNSNYQITFCP 169 The following BLAST results are available for this feature:
BLAST of CF835449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835449 ID=CF835449; Name=CF835449; organism=Citrus sinensis; type=EST; length=701bpback to top |