CF835451

Overview
NameCF835451
Unique NameCF835451
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10948 contig Csv1_Contig10948:613..1390. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 6.455e-42
Identity = 86/141 (60.99%), Postives = 109/141 (77.30%), Query Frame = -1
Query:  239 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDI 661
            ISTSP+K+ EA E+L AD+F+ S D  Q+Q    +LD IIDTV+A H + P+L LLK  GKLVLVGAP+KP+ELP   LI G++TVSGS TGGMKETQEM+D   +HNIT DIE++S D +N A+ RLA+ DVRYRFVI++
Sbjct:  214 ISTSPAKEREARENLKADNFVVSTDQKQMQAMTRSLDYIIDTVAATHSLGPILELLKVNGKLVLVGAPEKPVELPSFPLIFGKRTVSGSMTGGMKETQEMMDICGEHNITCDIEIVSTDRINDALARLARNDVRYRFVINV 354          
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.430e-42
Identity = 85/145 (58.62%), Postives = 109/145 (75.17%), Query Frame = -1
Query:  227 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 661
            ISTSP K+ EALE LGAD F+ S +  +++ AMGT+ GII+T SA   +   L LLK +GK++LVG P+KPL++P  +L+ G K ++GS  G + ETQEMIDFAA+H + ADIE+I  D VNTAMERLAK DVRYRFV+DI NTL
Sbjct:  232 ISTSPVKRQEALERLGADGFIVSTNASEMKAAMGTMHGIINTASASTSMHSYLALLKPKGKMILVGLPEKPLQIPTFALVGGGKILAGSCMGSISETQEMIDFAAEHGVAADIELIGADEVNTAMERLAKGDVRYRFVVDIGNTL 376          
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.878e-41
Identity = 82/147 (55.78%), Postives = 112/147 (76.19%), Query Frame = -1
Query:  221 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 661
            IS+SP+K+ EAL  LGAD+FL+SRD + +  A  T+DGIIDTVSA HP++PLL LLK +G++V+VGAP  PL+LP  ++I G K V+G+  G + E Q M+DFA +H I AD+EV++MD VN A+ RL + DVRYRFV+D+A T+ A
Sbjct:  208 ISSSPAKRGEALGRLGADAFLSSRDGEGMAAAAATMDGIIDTVSAGHPLVPLLSLLKPKGQMVVVGAPAMPLQLPAYAIIEGGKRVAGNGVGSVAECQAMLDFAGEHGIAADVEVVAMDAVNAALGRLERNDVRYRFVVDVAGTMHA 354          
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.645e-37
Identity = 76/141 (53.90%), Postives = 103/141 (73.05%), Query Frame = -1
Query:  239 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDI 661
            IS+S  K+ EALEHLGAD +L S D D++Q A  +LD IIDTV   HP+ P L LLK  GKL+L+G  + PL+     +++GRK+++GS  G MKET+EM+DF  +  +T+ IE++ MDY+NTAMERL K DVRYRFV+D+
Sbjct:  210 ISSSNKKRQEALEHLGADDYLVSSDTDKMQEASDSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERLEKNDVRYRFVVDV 350          
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.806e-37
Identity = 77/144 (53.47%), Postives = 103/144 (71.53%), Query Frame = -1
Query:  230 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 661
            IS+S  KK EA++HLGAD++L S D  Q+Q A  +LD IIDTV   HP+ P L LLK  GKL+L+G  + PL+     +++GRK ++GS  G MKET+EM+DF  +  IT+ IEV+ MDY+NTA ERL K DVRYRFV+D+A +
Sbjct:  211 ISSSDKKKEEAIDHLGADAYLVSSDATQMQEAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFISPMVMLGRKAITGSFIGSMKETEEMLDFCNEKGITSTIEVVKMDYINTAFERLEKNDVRYRFVVDVAGS 354          
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 3.665e-37
Identity = 82/183 (44.81%), Postives = 111/183 (60.66%), Query Frame = -1
Query:  230 PLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 778
            PLK+FGL +                             VIS+S  K+ EA+EHLGAD +L S D + +Q A   LD IIDTV  VHP+ P L LLK  GKL+L+G  + PL+     +++GRK+++GS  G MKET+EM++F  +  + + IEVI MDY+NTA ERL K DVRYRFV+D+A +
Sbjct:  171 PLKHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEAMEHLGADEYLVSSDVESMQKAADQLDYIIDTVPVVHPLEPYLSLLKLDGKLILMGVINAPLQFVTPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGVASMIEVIKMDYINTAFERLEKNDVRYRFVVDVAGS 353          
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.665e-37
Identity = 76/144 (52.78%), Postives = 105/144 (72.92%), Query Frame = -1
Query:  230 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 661
            IS+S  K+TEALEHLGAD++L S D + ++ A  +LD I DT+  VHP+ P L LLK  GKL+L G  + PL+     +++GRK+++GS  G MKET+EM++F  +  +T+ IEVI MDYVNTA+ERL K DVRYRFV+D+A +
Sbjct:  209 ISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVAGS 352          
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.665e-37
Identity = 80/183 (43.72%), Postives = 115/183 (62.84%), Query Frame = -1
Query:  230 PLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 778
            P+K+FG+ E                             VIS+S  KK EALE LGAD++L S+D +++Q A  +LD I+DT+   HP+ P L LLK+ GKLV++G   +PL      LI+GR++++GS  G M+ETQE +DF A+  +++ IEV+ +DY+NTAMERL K DVRYRFV+D+A +
Sbjct:  171 PMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKDAEKMQEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLVKNDVRYRFVVDVARS 353          
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.787e-37
Identity = 80/181 (44.20%), Postives = 114/181 (62.98%), Query Frame = -1
Query:  236 PLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIA 778
            P+K+FG+ E                             VIS+S  KK EALE LGAD++L S+D +++Q A  +LD I+DT+   HP+ P L LLK+ GKLV++G   +PL      LI+GR++++GS  G M+ETQE +DF A+  +++ IEV+ +DY+NTAMERL K DVRYRFV+D+A
Sbjct:  171 PMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKDAEKMQEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLVKNDVRYRFVVDVA 351          
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.066e-36
Identity = 75/144 (52.08%), Postives = 104/144 (72.22%), Query Frame = -1
Query:  230 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 661
            IS+S  K+TEALEHLGAD++L S D + ++ A  +LD I DT+  VHP+ P L LLK  GKL+L G  + PL+     +++GRK+++GS  G MKET+EM++F  +  +T+ IEVI MDYVNTA+ERL K DVRYRFV+D+  +
Sbjct:  210 ISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGS 353          
The following BLAST results are available for this feature:
BLAST of CF835451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
CADH6_ORYSJ6.455e-4260.99Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]
CADH7_ORYSJ8.430e-4258.62Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
CAD8D_ORYSJ1.878e-4155.78Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]
CADH1_TOBAC1.645e-3753.90Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH1_ARACO2.806e-3753.47Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH_POPDE3.665e-3744.81Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH_EUCBO3.665e-3752.78Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_PICAB3.665e-3743.72Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]
CADH7_PICAB4.787e-3744.20Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH_EUCGL1.066e-3652.08Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01E03_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835451 ID=CF835451; Name=CF835451; organism=Citrus sinensis; type=EST; length=778bp
TTTTTTTTTTTATATGAACAATGTTTTATTCCATTAACATTTATAGTTTT
TTGGCAATCACGACATAATTAGGGCGATGTAACTGGAAATTAAAAGTAAT
TTAAGCGCTAAAAGAGTGTAATGATCGAGGGAGCATTACATATAGCCAAG
TGGATCATGGAACAAAGTTGTGAATTGAAGACACCAATCTGATTCTGATT
CTGATTCTTCAAGGTTTGGTGGCGGCCAAGGTGTTTGCAATATCAATGAC
AAATCGATACCGAACATCAGCCTTGGCGAGCCGCTCCATTGCCGTATTGA
CATAATCCATCGAAATAACCTCAATGTCAGCTGTTATATTGTGTTTTGCT
GCAAAATCAATCATCTCTTGCGTCTCTTTCATTCCCCCAGTGCTGCTCCC
TGACACCGTCTTCCTCCCCATAATTAAGGAAATCACAGGTAGCTCGAGTG
GCTTGTCCGGAGCACCAACCAAAACAAGCTTGCCCTGGGACTTTAATAGA
CCGAGCAATGGCAAAATGGGGTGCACAGCGGACACCGTGTCAATAATACC
ATCCAATGTGCCCATGGCACCCTGCAATTGGTCAGGGTCACGGCTATTCA
AAAATGAATCAGCGCCAAGATGTTCAAGAGCTTCAGTCTTCTTGCTTGGA
GAGGTGCTAATTACTGTCACTTTGGCCCCAAAAGCCTTGGCAAATTTGAC
AGCGACATGACCAAGCCCGCCAAGGCCAACGATGCCTACATGCTTTCCTT
GTTCTGCTAGTCCAAAGTATTTCAATGG
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