CF835452

Overview
NameCF835452
Unique NameCF835452
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length784
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10948 contig Csv1_Contig10948:102..885. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835452 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.026e-55
Identity = 108/249 (43.37%), Postives = 141/249 (56.63%), Query Frame = 2
Query:   35 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDPLQGAMGTLDGIIDTVSAVHPILP 781
            GWAARD SG LSP+ ++ R TG EDV +KVLYCG+CHTDL  +KN+ G S +P+VPGHE+ GEV E                     +C +C  C  D+E YC K I   + + TDG  T GG++  MV +++++V+ P+ M  + AAPLLCAGITVYSPL +FG  +                              IS+S  K+ EALEHLGAD +L S D D +Q A  +LD IIDTV   HP+ P
Sbjct:   12 GWAARDPSGVLSPYTYTLRNTGPEDVEVKVLYCGLCHTDLHQVKNDLGMSNYPLVPGHEVVGEVVEVGPDVSKFKVGDTVGVGLLVGSCRNCGPCKRDIEQYCNKKIWNCNDVYTDGKPTQGGFAKSMVVDQKFVVKIPEGMAPEQAAPLLCAGITVYSPLNHFGFKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEASDSLDYIIDTVPVGHPLEP 260          
BLAST of CF835452 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.741e-55
Identity = 108/249 (43.37%), Postives = 141/249 (56.63%), Query Frame = 2
Query:   35 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDPLQGAMGTLDGIIDTVSAVHPILP 781
            GWAARD SG LSP+ +S R TG ED+ +KVL CGICH+D+  IKN+ G S +PMVPGHE+ GEV E                      C SC  C +D E YC K I  Y+ + TDG  T GG++  +V  ER++V+ PD +  + AAPL+CAG+TVYSPL  FGL +                              IS+S  K+TEALEHLGAD++L S D + ++ A  +LD I DT+  VHP+ P
Sbjct:   12 GWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEP 260          
BLAST of CF835452 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.804e-55
Identity = 107/249 (42.97%), Postives = 141/249 (56.63%), Query Frame = 2
Query:   35 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDPLQGAMGTLDGIIDTVSAVHPILP 781
            GWAARD SG LSP+ +S R TG ED+ +KVL CG+CH+D+  IKN+ G S +PMVPGHE+ GEV E                      C SC  C +D E YC K I  Y+ + TDG  T GG++  +V  ER++V+ PD +  + AAPL+CAG+TVYSPL  FGL +                              IS+S  K+TEALEHLGAD++L S D + ++ A  +LD I DT+  VHP+ P
Sbjct:   12 GWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGVCHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEP 260          
BLAST of CF835452 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.150e-54
Identity = 106/252 (42.06%), Postives = 142/252 (56.35%), Query Frame = 2
Query:   26 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDPLQGAMGTLDGIIDTVSAVHPILP 781
            K  GWAARD++GHLSP++++ R TG EDV +KVLYCGICHTD+   KN  G S +PMVPGHE+ GEV E                      C  C  C  ++E YC K I +Y+ + TDG  T GG++  MV +++++V+ P  +  + AAPLLCAG+TVYSPLK+FGL                                IS+S  K+ EA++HLGAD++L S D   +  A  +LD IIDTV   HP+ P
Sbjct:    9 KVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVAKYGVGDVVGVGVIVGCCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNPGLRGGILGLGGVGHMGVKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVSSDAAAMAAAADSLDYIIDTVPVHHPLEP 260          
BLAST of CF835452 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.345e-54
Identity = 106/249 (42.57%), Postives = 140/249 (56.22%), Query Frame = 2
Query:   35 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDPLQGAMGTLDGIIDTVSAVHPILP 781
            GWAARD SG LSP+ +S R TG ED+ +KVL CGICH+D+  IKN+ G S +PMVPGHE+ GEV E                      C SC  C +D E YC K I  Y+ + TDG  T GG++  +V  ER++V+ PD +  + AAPL+CAG+TVY PL  FGL +                              IS+S  K+TEALEHLGAD++L S D + ++ A  +LD + DT+  VHP+ P
Sbjct:   12 GWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYRPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYVFDTIPVVHPLEP 260          
BLAST of CF835452 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.707e-54
Identity = 107/249 (42.97%), Postives = 139/249 (55.82%), Query Frame = 2
Query:   35 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDPLQGAMGTLDGIIDTVSAVHPILP 781
            GWAARD++GHLSP+ ++ R TG EDV LKVLYCGICHTDL   KN  G S +PMVPGHE+ GEV E                      C  C  C  ++E YC K I +Y+ + TDG  T GG++  MV +++++V+ P  +  + AAPLLCAG+TVYSPLK+FGL                                IS+S  K+ EA++ LGAD +L S D   +  AM +LD IIDTV   HP+ P
Sbjct:   13 GWAARDATGHLSPYTYNLRRTGAEDVVLKVLYCGICHTDLHQTKNHLGASKYPMVPGHEVVGEVVEVGPEVSKYSVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGKPTQGGFAGSMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLMTPGLRGGILGLGGVGHMGVKVAKSMGHHVTVISSSDKKRAEAMDDLGADDYLVSSDEAQMAAAMDSLDYIIDTVPVKHPLEP 261          
BLAST of CF835452 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.707e-54
Identity = 106/252 (42.06%), Postives = 143/252 (56.75%), Query Frame = 2
Query:   26 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDPLQGAMGTLDGIIDTVSAVHPILP 781
            K  GWAARD SG LSP+ ++ R TG +DV ++V+ CGICHTD+  IKN+ G S +PMVPGHE+ GEV E                     +C +C  C +D+E YC K I +Y+ +  DG  T GG++  MV +++++V+ PD M  + AAPLLCAG+TVYSPL +FGL +                              IS+S  K+ EAL+HLGAD +L S D   +Q A  +LD IIDTV   HP+ P
Sbjct:    9 KTVGWAARDPSGVLSPYEYTLRNTGPQDVYVEVMCCGICHTDVHQIKNDLGMSNYPMVPGHEVVGEVVEVGSEVTKFRAGDVVGVGCIVGSCGNCRPCNSDIEQYCNKKIWSYNDVYPDGKPTQGGFAGAMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLNHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRAEALDHLGADDYLVSSDAARMQEAADSLDYIIDTVPVFHPLEP 260          
BLAST of CF835452 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.168e-53
Identity = 104/252 (41.27%), Postives = 141/252 (55.95%), Query Frame = 2
Query:   26 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDPLQGAMGTLDGIIDTVSAVHPILP 781
            K  GWAARD++GHL+P+ ++ R TG EDV +KVLYCGICHTD+   KN  G S +PMVPGHE+ GEV E                      C  C+ C  ++E YC K I +Y+ + TDG  T GG++  MV +++++++ P  +  + AAPLLCAG+TVYSPLK FGL                                IS+S  K+ EA++HLGAD++L S D   +  A  +LD IIDTV   HP+ P
Sbjct:    9 KVVGWAARDATGHLAPYTYTLRSTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYGVGDVVGVGVIVGCCRECKPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVMKIPAGLAPEQAAPLLCAGVTVYSPLKAFGLTTPGLRGAILGLGGVGHMGVKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVSSDAAAMAAAADSLDYIIDTVPVHHPLEP 260          
BLAST of CF835452 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.168e-53
Identity = 104/249 (41.77%), Postives = 141/249 (56.63%), Query Frame = 2
Query:   29 AFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDPLQGAMGTLDGIIDTVSAVHPI 775
            A GWAARD SG LSP+ ++ R TG EDV++KVLYCG+CH+DL  +KN+ G S +P+VPGHE+ G+V E                     +C +C  C  ++E YC K I   + + TDG  T GG+++ MV ++ ++V+ P+ M  + AAPLLCAGITVYSP  +FG  +                              IS+S  K+ EALEHLGAD +L S D D +Q A  +LD IIDTV   HP+
Sbjct:   10 AIGWAARDPSGLLSPYTYTLRNTGPEDVQVKVLYCGLCHSDLHQVKNDLGMSNYPLVPGHEVVGKVVEVGADVSKFKVGDTVGVGLLVGSCRNCGPCKREIEQYCNKKIWNCNDVYTDGKPTQGGFANSMVVDQNFVVKIPEGMAPEQAAPLLCAGITVYSPFNHFGFNQSGFRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEAADSLDYIIDTVPVGHPL 258          
BLAST of CF835452 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.831e-53
Identity = 105/249 (42.17%), Postives = 141/249 (56.63%), Query Frame = 2
Query:   35 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDPLQGAMGTLDGIIDTVSAVHPILP 781
            GWAARD+SGHL+P+N++ R+TG EDV +KVLYCGICHTD+   KN  G S +PMVPGHE+ GEV E                      C  C  C  ++E YC K I +Y+ + TDG  T GG++  MV +++++V+ P  +  + AAPLLCAG+TVYSPLK+FGL                                IS+S  K+ EA++ LGAD++L S D   +  A  +LD IIDTV   HP+ P
Sbjct:   12 GWAARDASGHLTPYNYTLRKTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYSAGDVVGVGVIVGCCRECHPCKANVEQYCNKRIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGLTVYSPLKHFGLMSPGLRGGVLGLGGVGHMGVKVAKSMGHHVTVISSSARKRGEAMDDLGADAYLVSSDAAAMAAAGDSLDYIIDTVPVHHPLEP 260          
The following BLAST results are available for this feature:
BLAST of CF835452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
CADH1_TOBAC3.026e-5543.37Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH_EUCGL6.741e-5543.37Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_EUCGU8.804e-5542.97Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH_MAIZE1.150e-5442.06Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]
CADH1_EUCGU3.345e-5442.57Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CADH_LOLPR5.707e-5442.97Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
CADH1_OCIBA5.707e-5442.06Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH_SACOF2.168e-5341.27Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
CADH2_TOBAC2.168e-5341.77Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH2_ORYSJ4.831e-5342.17Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01E03_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835452 ID=CF835452; Name=CF835452; organism=Citrus sinensis; type=EST; length=784bp
GTCACCAGAACATTAACATCCAGTAAAGGCCTTCGGGTGGGCAGCCCGAG
ACAGCTCCGGCCATCTCTCCCCATTCAACTTCTCCAGAAGGGAAACGGGT
GATGAGGATGTGAGGCTGAAGGTATTGTATTGTGGGATCTGCCATACTGA
TCTCGCCAACATCAAGAATGAATGGGGCTTCTCTCTCTTCCCTATGGTTC
CTGGGCATGAAATTGCAGGGGAAGTGACAGAAGTTGGTAGCAAAGTAAGA
AAGGTTAAAGTGGGAGATAAAGTTGGAGTTGGATGCATGGTTGGTGCATG
CCACAGCTGCGAGAGCTGTGCCAATGACCTTGAAAATTACTGTCCGAAAA
TGATACTCACCTACAGTTCCATTAACACTGACGGAACAATCACATTCGGA
GGCTACTCTGATCACATGGTTGCCAATGAGCGCTACATTGTTCGATTCCC
TGATAGCATGCCCCTTGATGCTGCTGCTCCTCTGCTTTGCGCCGGGATTA
CCGTGTACAGTCCATTGAAATACTTTGGACTAGCAGAACAAGGAAAGCAT
GTAGGCATCGTTGGCCTTGGCGGGCTTGGTCATGTCGCTGTCAAATTTGC
CAAGGCTTTTGGGGCCAAAGTGACAGTAATTAGCACCTCTCCAAGCAAGA
AGACTGAAGCTCTTGAACATCTTGGCGCTGATTCATTTTTGAATAGCCGT
GACCCTGACCCATTGCAGGGTGCCATGGGCACATTGGATGGTATTATTGA
CACGGTGTCCGCTGTGCACCCCATTTTGCCATTG
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