CF835467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 2.743e-35 Identity = 81/135 (60.00%), Postives = 97/135 (71.85%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSL 469 MGRGRVE+KR+EN INR+VTF++RRNGLL KA ELSVLCDAE ALI+FS RGKLYEF S I T+ERY+RC + N+P TQS QE +LK+ E L R+ RNLLGE L + EL+ LE QLE +L Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GSVGIESTIERYNRCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAAL 134
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 4.679e-35 Identity = 77/139 (55.40%), Postives = 101/139 (72.66%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPP--IETQSTY-QEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSLK 472 MGRGRVELKR+EN INR+VTF++RR GLL KA E+SVLCDAE +LI+FS +GKL+E+ S + K LERY R S + P + Q+ + EY RLK +ELL+R+QR+ LGE L+P+S +L+ LE QLET+LK Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALK 139
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 3.033e-34 Identity = 79/137 (57.66%), Postives = 97/137 (70.80%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTY-QEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSLK 472 MGRG V+L+R+EN INR+VTF++RRNGLL KA E+SVLCDA+ ALI+FS +GKLYEF S + LERY R S P E Q + EY LK+ ++ LQ+SQR LLGE LD L+ EL+QLEHQLE SLK Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLK 137
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 3.033e-34 Identity = 79/137 (57.66%), Postives = 97/137 (70.80%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTY-QEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSLK 472 MGRG V+L+R+EN INR+VTF++RRNGLL KA E+SVLCDA+ ALI+FS +GKLYEF S + LERY R S P E Q + EY LK+ ++ LQ+SQR LLGE LD L+ EL+QLEHQLE SLK Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLK 137
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.505e-33 Identity = 73/137 (53.28%), Postives = 99/137 (72.26%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTY-QEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSLK 472 MGRGRV+LKR+EN INR+VTF++RR GLL KA E+SVLCDAE AL++FS +GKL+E+ + + K LERY R S + P + + + EY RLK +ELL+R+QR+ LGE L +S+ EL+ LE QL+T+LK Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALK 137
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 2.568e-33 Identity = 74/137 (54.01%), Postives = 99/137 (72.26%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTY-QEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSLK 472 MGRG+V+LKR+EN INR+VTF++RR+GLL KA+E+SVLCDAE ALI+FS +GKLYE+ + + K LERY R S +TQ + EY +LK VE +Q+ Q++L+GE L+ L+ EL+QLE QLE SLK Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLK 137
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 2.568e-33 Identity = 73/137 (53.28%), Postives = 98/137 (71.53%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTY-QEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSLK 472 MGRGRV+LKR+EN INR+VTF++RR GLL KA E+SVLCDAE AL++FS +GKL+E+ + + K LERY R S + P + + + EY RLK +ELL+R+QR+ LGE L +S EL+ LE QL+T+LK Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALK 137
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 7.470e-33 Identity = 73/137 (53.28%), Postives = 99/137 (72.26%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTY-QEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSLK 472 MGRG+V+LKR+EN INR+VTF++RR+GLL KA+E+SVLCDAE ALI+FS +GKLY++ + + K LERY R S +TQ + EY +LK VE +Q+ Q++L+GE L+ L+ EL+QLE QLE SLK Sbjct: 1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLK 137
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 6.324e-32 Identity = 71/137 (51.82%), Postives = 97/137 (70.80%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTY-QEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSLK 472 MGRG+V+LKR+EN INR+VTF++RRNGLL KA E+SVLCDAE A I+FS +GKLYE+ + + K LERY R S E++ + EY +LK +E +Q+ ++L+GE L+ L+ EL+QLE QLE+SLK Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLK 137
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 6.324e-32 Identity = 69/137 (50.36%), Postives = 100/137 (72.99%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHE-GNRPPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSLK 472 MGRGRV+LKR+EN INR+VTF++RR+GLL KA E+SVLCDAE ALI+FS +GKL+E+ + + + LERY R + R ++++ E+ +LK VE+L++++RN +GE LD LS EL+ LEHQL+ ++K Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIK 137 The following BLAST results are available for this feature:
BLAST of CF835467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835467 ID=CF835467; Name=CF835467; organism=Citrus sinensis; type=EST; length=472bpback to top |