CF835467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 8.259e-32 Identity = 69/137 (50.36%), Postives = 99/137 (72.26%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHE-GNRPPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSLK 472 MGRGRV+LKR+EN INR+VTF++RR+GLL KA E+SVLCDAE AL++FS +GKL+E+ + + K LERY R + R ++++ E+ +LK VE+L++++RN +GE LD LS EL+ LEHQL ++K Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIK 137
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 5.354e-31 Identity = 71/139 (51.08%), Postives = 99/139 (71.22%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTYQ---EYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSLK 472 MGRGRV+LKR+EN INR+VTF++RR+GLL KA E+SVLCDAE LI+FS +GKL+E+ + + + LERY R S E P + S E+ +LK +E+LQR+Q++ +GE L+ LS EL+ LEHQL+++LK Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYERYSFA--EKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALK 137
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.193e-30 Identity = 70/141 (49.65%), Postives = 99/141 (70.21%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTYQ-----EYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSLK 472 MGRGRV+LKR+EN INR+VTF++RR+GLL KA E+SVLCDAE LI+FS +GKL+E+ + + + LERY R S R + T T E+ +LK +E+LQR+Q++ +GE L+ L+ EL+ LEHQL+++LK Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERLLERYERYSF----AERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALK 137
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.319e-29 Identity = 67/136 (49.26%), Postives = 94/136 (69.12%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHR-CSCGAHEGNRPPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSL 469 MGRG++E+KR+EN NR+VTF +RRNGLL KA ELSVLCDAE ALI+FS RG+LYE+ ++ I T+ERY + CS + I QE +L+ ++ +Q S RNL+G+ L LS EL+Q+E++LE ++ Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNN-IRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAI 135
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 1.722e-29 Identity = 72/135 (53.33%), Postives = 96/135 (71.11%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSL 469 MGRG+VE+KR+EN I R+VTF++R++GLL KA ELSVLCDAE +LI+FS GKLYEF S+ + +T+ERY+RC + N +TQ QE +LK E L R+ RNL+GE L+ +S EL+ LE QLE +L Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEF-SNVGVGRTIERYYRCKDNLLD-NDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGAL 133
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 5.011e-29 Identity = 70/138 (50.72%), Postives = 97/138 (70.29%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQ--STYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSLK 472 MGRGRV+LKR+EN INR+VTF++RR+GLL KA E+SVLCDAE LI+FS +GKL+E+ + + + LERY R S A + P T S E +LK +E+LQR+++ +GE L+ L+ EL+ LEHQL ++LK Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYERYSF-AEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALK 137
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica GN=MADS13 PE=1 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 6.544e-29 Identity = 67/139 (48.20%), Postives = 99/139 (71.22%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRC-SCGAHEGNRPPIET---QSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSL 469 MGRGR+E+KR+EN +R+VTF +RRNGLL KA ELSVLCDAE ALI+FS RG+LYE+ ++ + T++RY + +CG+ G P IE Q QE +L+ +++LQ + ++L+G+++ LS EL+QLE +LE + Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNNVKATIDRYKKAHACGSTSG-APLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGI 138
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 8.547e-29 Identity = 70/135 (51.85%), Postives = 91/135 (67.41%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSL 469 M RG+ E+KR+EN +R+VTF++RRNGLL KA ELSVLCDAE ALI+FS RGKLYEF SS I KT+ERY + ++ +Q + E L +E L+ S R ++GE LD S EL+QLE+QL+ SL Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPKTVERYQKRIQDLGSNHKRNDNSQQSKDETYGLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSL 135
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 3.248e-28 Identity = 65/136 (47.79%), Postives = 92/136 (67.65%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHR-CSCGAHEGNRPPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSL 469 +GRG++E+KR+EN NR+VTF +RRNGLL KA ELSVLCDAE ALI+FS RG+LYE+ ++ + T+ERY + CS ++ G+ Q QE +L+ + LQ RN+LGE L LS +L+ LE ++E + Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VKATIERYKKACSDSSNTGSISEANAQYYQQEASKLRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGI 151
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 4.242e-28 Identity = 68/135 (50.37%), Postives = 88/135 (65.19%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSL 469 M RGR ELKR+EN +R+VTF++RRNGLL KA ELSVLCDAE ALI+FS RG+LYEF S+P + KT++RY + + Q + L L +E L S+R +LGE+L+ S EL LE +LE SL Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGLEMKLEKSL 135 The following BLAST results are available for this feature:
BLAST of CF835467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835467 ID=CF835467; Name=CF835467; organism=Citrus sinensis; type=EST; length=472bpback to top |