CF835467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 4.109e-23 Identity = 55/136 (40.44%), Postives = 86/136 (63.24%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSLK 472 MGRG++ ++R++N +R+VTF++RRNG+ KA EL++LCDAE L++FS G+LYE+ SS + ++RY + P E + +E L+ + LQ + R L+GE L L+ EL+ LE+QLE SL+ Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEY-SSTSMKSVIDRYGKSKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLR 135
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 9.153e-23 Identity = 60/137 (43.80%), Postives = 88/137 (64.23%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKT-LERYHRCSCGAHEGNRPPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSLK 472 MGRG++ ++R++N +R+VTF++RRNGLL KA ELS+LCDAE L++FS G+LYEF S+ MKT ++RY GN E + +E L+ + LQ S + L+GE L L +L+ LE++LE SL+ Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTN--MKTVIDRYTNAKEELLGGNATS-EIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLR 134
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 1.561e-22 Identity = 55/136 (40.44%), Postives = 85/136 (62.50%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSLK 472 MGRG++ ++++++ +R+VTF++RR GL+ KA EL++LCDAE LI+FS KLY+F SS + T+ER++ E P E + +E L+ + LQ + R L G L+ LS EL+ +E QLE SL+ Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSS-VKSTIERFNTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLR 135
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.039e-22 Identity = 63/135 (46.67%), Postives = 88/135 (65.19%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSL 469 MGRG++E+KR+EN +R+VTF++RR+GLL KA ELSVLCDAE A+I+FSK GKL+E+ SS + +TL RY G H+ + + + E LK + LQ L G+ L+PL+ EL+ LE QL +L Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEY-SSTGMKQTLSRY-----GNHQSSSAS-KAEEDCAEVDILKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHAL 128
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.663e-22 Identity = 55/137 (40.15%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAH--EGNRPPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSL 469 MGRG++E+KR+EN NR+VTF++RR GLL KA+EL+VLCDA +++FS GK++E+CS ++ L ++ + +H E N Q E R+K +E L+ R G+ L L+ +++ LE QLE S+ Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHATNSHFEEIN----HDQQILLEMTRMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSV 133
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.933e-22 Identity = 60/139 (43.17%), Postives = 84/139 (60.43%), Query Frame = 2 Query: 62 IMGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAH---EGNRPPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSL 469 IMGRG++E+KR+EN +R+VTF++RR GLL K ELSVLCDA+ LI+FS +GKL+E+CS P M + + + GA E NR + Y E +++ LQ S + G+ L EL +LE QLE +L Sbjct: 3 IMGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTTGASLPVEDNRVQL-----YDEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHAL 136
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.012e-21 Identity = 54/137 (39.42%), Postives = 83/137 (60.58%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAH--EGNRPPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSL 469 MGRG++E+KR+EN NR+VTF++RR GLL KA+EL+VLCDA +++FS GK++E+CS ++ L +++ H E N Q + E R++ +E L R G+ L L+ ++ LE QLE S+ Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQTVTNTHFEEIN----HDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSV 133
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 1.012e-21 Identity = 54/135 (40.00%), Postives = 84/135 (62.22%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSL 469 MGRG++ +KR++N +NR+VTF++RR GL+ KA EL++LCDA+ LI+FS G+LY+F SS + +ERY P E + +E L+ V+ L + R LLGE + + +L+ L++Q+E SL Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSSS-MKSIIERYQEAGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSL 134
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.726e-21 Identity = 56/136 (41.18%), Postives = 85/136 (62.50%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQST-YQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSL 469 M R ++++++++N R+VTF++RR GL KA+ELSVLCDA+ ALI+FS GKL+EFCSS + + LER++ S + ++P +E Q ++ R+ + R + GE L L EL+QLE LET L Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSS-MKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGL 135
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.022e-21 Identity = 58/139 (41.73%), Postives = 86/139 (61.87%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMK-TLERYHRCSCGAHE-GNR--PPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSL 469 MGRG++E+KR+EN+ +R+VTF++RR+GL+ K ELSVLCDA+ LI+FS +GKL E+C+ P MK ++RY + E NR P + +E R+K LQ + + G+ L + EL +LE L+ SL Sbjct: 1 MGRGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGILPEMENRAGPHADNDQVIKELTRMKEETLNLQLNLQRYKGDDLSTVRFEELTELEKLLDQSL 139 The following BLAST results are available for this feature:
BLAST of CF835467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835467 ID=CF835467; Name=CF835467; organism=Citrus sinensis; type=EST; length=472bpback to top |