CF835467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 5.746e-17 Identity = 49/111 (44.14%), Postives = 70/111 (63.06%), Query Frame = 2 Query: 143 GLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMK-TLERYHRCSCGAHEGNRPPI-ETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSL 469 GLL KA EL++LCDA+ +I+FS GK++EF S PI M+ ++RY + S GN P+ + Q Y E R+K ++ LQ + R+ GE L L+ NE+ QLE QLE S+ Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQKLS-----GNCAPVYDNQQVYCEITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISV 107
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 9.802e-17 Identity = 52/136 (38.24%), Postives = 75/136 (55.15%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSLK 472 MGRGR E+KR+EN R+ TF +RR+GL KA EL+VLCDA+ L++FS GKLY F SP + E R H I Q E ++ + +LL++ R + + + + LE LEH LE +++ Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFL-SPTVPSVREFVERYEATTHTKVWADIR-QERRAELEKVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNLEAAMR 134
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 9.802e-17 Identity = 51/137 (37.23%), Postives = 78/137 (56.93%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTYQEYL-RLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSLK 472 M RG++++KR+EN NR+VT+++RRNGL KA ELSVLCDA+ ++IM S KL+E+ S K L ++ + G + QE+L +L L+R R +GE L+ L ++ L ++ SLK Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKAVGVDLWS----SHYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQIVNLIEDMDNSLK 133
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.280e-16 Identity = 46/135 (34.07%), Postives = 82/135 (60.74%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQSTYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSL 469 MGRG++E++++EN NR+VTF++RRNG++ KA EL+VLCDA+ +L+M S KL+ + S + +K + ++ G + Q +++ L L + LL+R +G L+ L+ EL L+ ++E ++ Sbjct: 1 MGRGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSPGVSLKKMYDEYQKIEGVDLWRKQWERMQEQHRKVLELNS---LLRREISRRMGGDLEGLTLVELSALQQEMEEAI 132
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 4.865e-16 Identity = 48/134 (35.82%), Postives = 77/134 (57.46%), Query Frame = 2 Query: 71 RGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPPIETQ-STYQEYLRLKTAVELLQRSQRNLLGEHLDPLSTNELEQLEHQLETSL 469 R R+ ++R++N R+VTF++RR GL KA+ELS+LCDAE L++FS GKL++F S+ + + ++RY+ S ++ Q RLK + R + GE L L+ +L++LE LE+ L Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTS-MEQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGL 154
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.415e-15 Identity = 54/159 (33.96%), Postives = 85/159 (53.46%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERYHRCSCGAHEGNRPP-----------IETQSTYQEYLRLKTAVELLQRSQ------------RNLLGEHLDPLSTNELEQLEHQLETSLK 472 M R R E++R+E+ R+VTF++RR GL KA+EL+VLCDA+ AL++FS GKL +F SS + + +++Y S + ++ P + T + Y+ L +E + S R + GE L+ LS EL+Q+E LE L+ Sbjct: 1 MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSN-MNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQ 158
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: SRFC_DICDI (Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.566e-12 Identity = 33/70 (47.14%), Postives = 51/70 (72.86%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSSPIIMKTLERY 274 MGR ++ ++++ N+ NR+ TF +R+NGL+ KA ELS+LCD E A+I+FS KL+++ SS + K L RY Sbjct: 3 MGRNKITIEKISNERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFSSNNKLFQY-SSRDMDKLLIRY 71
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: MEF2_DROME (Myocyte-specific enhancer factor 2 OS=Drosophila melanogaster GN=Mef2 PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 4.712e-11 Identity = 30/60 (50.00%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSS 244 MGR ++++ R+ ++ NR+VTF +R+ G++ KA ELSVLCD E ALI+FS KLY++ S+ Sbjct: 1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYAST 60
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: MEF2D_XENLA (Myocyte-specific enhancer factor 2D homolog OS=Xenopus laevis GN=mef2d PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.037e-11 Identity = 29/60 (48.33%), Postives = 47/60 (78.33%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSS 244 MGR +++++R+ ++ NR+VTF +R+ GL+ KA ELSVLCD E ALI+F+ KL+++ S+ Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST 60
BLAST of CF835467 vs. ExPASy Swiss-Prot
Match: MEF2D_RAT (Myocyte-specific enhancer factor 2D OS=Rattus norvegicus GN=Mef2d PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.037e-11 Identity = 29/60 (48.33%), Postives = 47/60 (78.33%), Query Frame = 2 Query: 65 MGRGRVELKRVENDINREVTFAERRNGLLNKADELSVLCDAEDALIMFSKRGKLYEFCSS 244 MGR +++++R+ ++ NR+VTF +R+ GL+ KA ELSVLCD E ALI+F+ KL+++ S+ Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST 60 The following BLAST results are available for this feature:
BLAST of CF835467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835467 ID=CF835467; Name=CF835467; organism=Citrus sinensis; type=EST; length=472bpback to top |