CF835468

Overview
NameCF835468
Unique NameCF835468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1217 contig Csv1_Contig1217:213..900. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: APX5_ARATH (L-ascorbate peroxidase 5, peroxisomal OS=Arabidopsis thaliana GN=APX5 PE=2 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 6.395e-48
Identity = 108/196 (55.10%), Postives = 124/196 (63.27%), Query Frame = -1
Query:  161 KTGGPFGTMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGF 688
            KTGG  G++R   E     N GL+ AV   E  K + P +SY DLYQLAGVV VEVTGGP IPF PGR D A+   +G LP+  +G  HLR +F ++MGL D+DIVALSGGHTLGR HKER                    ELL GE  GLLQL +DKALLDDP F P V+ YA DED FF  YA +H KLSELGF
Sbjct:   49 KTGGANGSIRFKEELNRPHNKGLEKAVAFCEEVKAKHPRVSYADLYQLAGVVAVEVTGGPAIPFTPGRKD-ADSADDGELPNPNEGASHLRTLF-SRMGLLDRDIVALSGGHTLGRAHKERSDFEGPWTQDPLKFDNSYFVELLKGETPGLLQLKTDKALLDDPKFHPFVKLYAKDEDMFFKAYAISHKKLSELGF 242          
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: APXT_ARATH (L-ascorbate peroxidase T, chloroplastic OS=Arabidopsis thaliana GN=APXT PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 7.835e-38
Identity = 95/214 (44.39%), Postives = 116/214 (54.21%), Query Frame = -1
Query:  164 GGPFGTMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP---PQEGRLPDAKQGN--DHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER------------------------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELG 682
            GG  G++R   E  H+AN GL  A++L +P K+++P ISY DL+QLA    +E  GGPDIP   GR D   P   P+EGRLPDA   +  DHLR VF  +MGL DK+IVALSG HTLGR   +R                                    ++     D LL LP+D AL +DP F+   EKYA D  AFF DYAEAH KLS LG
Sbjct:  128 GGANGSLRFEAELKHAANAGLLNALKLIQPLKDKYPNISYADLFQLASATAIEEAGGPDIPMKYGRVDVVAPEQCPEEGRLPDAGPPSPADHLRDVF-YRMGLDDKEIVALSGAHTLGRARPDRSGWGKPETKYTKTGPGEAGGQSWTVKWLKFDNSYFKDIKEKRDDDLLVLPTDAALFEDPSFKNYAEKYAEDVAAFFKDYAEAHAKLSNLG 340          
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: CCPR_GIBZE (Cytochrome c peroxidase, mitochondrial OS=Gibberella zeae GN=CCP1 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36
Identity = 94/213 (44.13%), Postives = 118/213 (55.40%), Query Frame = -1
Query:  164 TGGPFG-TMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDDK--AEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER-------------------ELLTGEK-----------------DGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELG 685
            TGG  G TMR A E  H AN GL  A    +P KE+FP I+Y DL+ LAGV  ++   GP IP+ PGR D+  +    +GRLPDA +  DHLR +FG +MG +D++IVALSG H LGRCH +R                    LL  EK                   L+ LPSD AL++D  F+P VEKYA D DAFF D++   L+L ELG
Sbjct:  127 TGGSNGATMRFAPESDHGANAGLAAARDFLQPVKEKFPWITYSDLWILAGVCAIQEMLGPAIPYRPGRSDRDVSGCTPDGRLPDASKRQDHLRGIFG-RMGFNDQEIVALSGAHALGRCHTDRSGYSGPWTFSPTVLTNDYFRLLVEEKWQWKKWNGPAQYEDKSTKSLMMLPSDIALIEDKKFKPWVEKYAKDNDAFFKDFSNVVLRLFELG 338          
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: APX7_ORYSJ (Probable L-ascorbate peroxidase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=APX7 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.292e-36
Identity = 93/214 (43.46%), Postives = 113/214 (52.80%), Query Frame = -1
Query:  164 GGPFGTMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP---PQEGRLPDA--KQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER------------------------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELG 682
            GG  G++R  VE  H AN GL  A++L +P K+++P ISY DL+QLA    +E  GGP IP   GR D   P   P EG+LPDA      DHLR+VF  +MGL DK+IV LSG HTLGR   ER                                    E+       LL LP+D AL +DP F+   EKYA D++AFF DYA AH KLS LG
Sbjct:  134 GGANGSLRFDVELKHGANAGLVNALKLVQPIKDKYPNISYADLFQLASATAIEEAGGPKIPMTYGRIDVTGPEQCPPEGKLPDAGPSAPADHLRKVF-YRMGLDDKEIVVLSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTAEWLKFDNSYFKEIKEKRDQDLLVLPTDAALFEDPTFKVYAEKYAEDQEAFFKDYAGAHAKLSNLG 346          
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: APX8_ORYSJ (Probable L-ascorbate peroxidase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=APX8 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 5.615e-36
Identity = 91/214 (42.52%), Postives = 117/214 (54.67%), Query Frame = -1
Query:  164 GGPFGTMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDD---KAEPPQEGRLPDA--KQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER------------------------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELG 682
            GG  G++R   E +H AN GL  A++L +P K+++P I+Y DL+QLA    +E  GGP IP   GR D     + P EGRLPDA  +   DHLR+VF  +MGL DK+IVALSG HTLGR   +R                                    ++       LL LP+D AL +DP F+   EKYA D++AFF DYAEAH KLS+LG
Sbjct:  133 GGADGSLRFDAELSHGANAGLINALKLIQPIKDKYPGITYADLFQLASATAIEEAGGPKIPMKYGRVDVTAAEQCPPEGRLPDAGPRVPADHLREVF-YRMGLDDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGEPGGQSWTVEWLKFDNSYFKDIKEQRDQDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSDLG 345          
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: CCPR_CRYNE (Cytochrome c peroxidase, mitochondrial OS=Cryptococcus neoformans GN=CCP1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.334e-36
Identity = 89/214 (41.59%), Postives = 114/214 (53.27%), Query Frame = -1
Query:  155 GGPFGTMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDD--KAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERELLTG------------------------------------EKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAE 682
            G  F TMR   E  HSANNGL +A    E  K++FP ISY DL+ L GV  V+ +GGP IP+ PGR D  +A+   +GRLPDA Q  DHLR +F  +MG +D++IVALSG H +GRCH  R    G                                        L+ LP+D ALL D  F+  V+ YA +E+ FF+D+A+A  KL ELG  E
Sbjct:  151 GSNFATMRFKPEAEHSANNGLHVAREHMEKIKQEFPWISYGDLWTLGGVCAVQESGGPTIPWRPGRIDGFEAQVTPDGRLPDASQAQDHLRFIFN-RMGFNDQEIVALSGAHAMGRCHTNRSGFEGPWTFSPVTFSNQYFALLRDEPWQWKKWTGPAQYEDKNTKTLMMLPTDMALLKDKSFKKYVDIYADNEEKFFSDFAKAFSKLIELGVPE 363          
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: APXS_ARATH (L-ascorbate peroxidase S, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=APXS PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.134e-35
Identity = 93/214 (43.46%), Postives = 115/214 (53.74%), Query Frame = -1
Query:  164 GGPFGTMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP---PQEGRLPDAKQGN--DHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER------------------------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELG 682
            GG  G++R  +E  H+AN GL  A+ L +  KE++  ISY DL+QLA    +E  GGP IP   GR D + P   P+EGRLPDA   +   HLR+VF  +MGL DKDIVALSG HTLGR   ER                                    E+     + LL LP+D A+ +D  F+   EKYAAD+DAFF DYA AH KLS LG
Sbjct:  149 GGANGSLRFDIELKHAANAGLVNALNLIKDIKEKYSGISYADLFQLASATAIEEAGGPKIPMKYGRVDASGPEDCPEEGRLPDAGPPSPATHLREVF-YRMGLDDKDIVALSGAHTLGRSRPERSGWGKPETKYTKEGPGAPGGQSWTPEWLKFDNSYFKEIKEKRDEDLLVLPTDAAIFEDSSFKVYAEKYAADQDAFFKDYAVAHAKLSNLG 361          
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: CCPR2_YARLI (Putative cytochrome c peroxidase, mitochondrial OS=Yarrowia lipolytica GN=YALI0D04268g PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.787e-35
Identity = 87/214 (40.65%), Postives = 113/214 (52.80%), Query Frame = -1
Query:  164 TGGPFG-TMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRD---DKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERELLTG------------------------------------EKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELG 685
            TGG  G TMR   E    ANNGL+ A +  EP K +FP I+Y DL+ LAGVV +E   GP +P+ PGR    D+   P  GRLPD  QG DHLR +F  +MG +D++IVAL G H +GRCH +R    G                                    E + L+ LP+D +L+ DP F   VE YAAD++ FF D+++   KL ELG
Sbjct:   48 TGGSNGATMRYMKEAKDEANNGLENARQFLEPIKAKFPWITYADLWTLAGVVAIEEMDGPKVPWKPGRQDYVDETNVPPNGRLPDGAQGQDHLRDIF-YRMGFNDQEIVALCGAHNMGRCHMDRSGFEGAWVPNPIRFANTYFKLLMNEEWKLTTLKNGVKQYFNEDEELMMLPADYSLMQDPEFHKWVEIYAADKEKFFEDFSKVFAKLIELG 260          
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: APX6_ORYSJ (Probable L-ascorbate peroxidase 6, chloroplastic OS=Oryza sativa subsp. japonica GN=APX6 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.787e-35
Identity = 92/216 (42.59%), Postives = 117/216 (54.17%), Query Frame = -1
Query:  164 KTGGPFGTMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP---PQEGRLPDAKQGN--DHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER------------------------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELG 688
            K GG  G++R  +E  H+AN GL  A++L +P K++   ++Y DL+QLA    +E  GGP IP   GR D A P   P EGRLP A   +  +HLR+VF  +MGLSDK+IVALSG HTLGR   ER                                    ++     + LL LP+D  L +D  F+   EKYAAD+DAFF DYAEAH KLS LG
Sbjct:   83 KCGGANGSLRFEIELKHAANAGLVNALKLIQPIKDKHAGVTYADLFQLASATAIEEAGGPKIPMIYGRVDVAAPEQCPPEGRLPAAGPPSPAEHLREVF-YRMGLSDKEIVALSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTSQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDSSFKIYAEKYAADQDAFFEDYAEAHAKLSNLG 297          
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: CCPR_CRYNV (Cytochrome c peroxidase, mitochondrial OS=Cryptococcus neoformans var. grubii GN=CCP1 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.640e-35
Identity = 87/214 (40.65%), Postives = 114/214 (53.27%), Query Frame = -1
Query:  155 GGPFGTMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDD--KAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERELLTG------------------------------------EKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAE 682
            G  F TMR   E  HSANNGL +A    E  K++FP ISY DL+ L GV  ++ +GGP IP+ PGR D   A+   +GRLPDA Q  DHLR +F  +MG +D++IVALSG H +GRCH  R    G                                    +   L+ LP+D AL+ D  F+  V+ YA +E+ FF+D+A+A  KL ELG  E
Sbjct:  151 GSNFATMRFKPEAEHSANNGLHVAREHMEKIKQEFPWISYGDLWTLGGVCAIQESGGPTIPWRPGRIDGYAAQVTPDGRLPDATQAQDHLRFIFN-RMGFNDQEIVALSGAHAMGRCHPNRSGFDGPWTFSPVTFSNQYFALLRDEPWQWKKWTGPAQFEDKKTKTLMMLPTDMALVKDKSFKKYVDIYADNEEKFFSDFAKAFSKLIELGVPE 363          
The following BLAST results are available for this feature:
BLAST of CF835468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
APX5_ARATH6.395e-4855.10L-ascorbate peroxidase 5, peroxisomal OS=Arabidops... [more]
APXT_ARATH7.835e-3844.39L-ascorbate peroxidase T, chloroplastic OS=Arabido... [more]
CCPR_GIBZE1.930e-3644.13Cytochrome c peroxidase, mitochondrial OS=Gibberel... [more]
APX7_ORYSJ3.292e-3643.46Probable L-ascorbate peroxidase 7, chloroplastic O... [more]
APX8_ORYSJ5.615e-3642.52Probable L-ascorbate peroxidase 8, chloroplastic O... [more]
CCPR_CRYNE7.334e-3641.59Cytochrome c peroxidase, mitochondrial OS=Cryptoco... [more]
APXS_ARATH2.134e-3543.46L-ascorbate peroxidase S, chloroplastic/mitochondr... [more]
CCPR2_YARLI2.787e-3540.65Putative cytochrome c peroxidase, mitochondrial OS... [more]
APX6_ORYSJ2.787e-3542.59Probable L-ascorbate peroxidase 6, chloroplastic O... [more]
CCPR_CRYNV3.640e-3540.65Cytochrome c peroxidase, mitochondrial OS=Cryptoco... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01E12_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835468 ID=CF835468; Name=CF835468; organism=Citrus sinensis; type=EST; length=688bp
ATTTCCTAAACACCCTGTGCAATAAAACAAAACCACAAAATTCAACCAAC
AACATCTTGAAATTCGAATTTTCTGACAATTCAAAAAACATAAAATAGAG
GCACACTGTTGTTGGCATCATTCCAACCATTTATTTACTCAGGTAACTTT
AGGCTTCGGCAAATCCTAGCTCAGAGAGCTTGAGATGAGCCTCAGCATAA
TCAGTGAAGAAAGCGTCCTCATCCGCAGCATATTTCTCAACAAGAGGGCG
GAAAACAGGGTCATCCAGAAGGGCCTTGTCAGATGGCAATTGCAAAAGAC
CATCCTTCTCACCAGTCAAGAGCTCCCTCTCCTTGTGGCACCTTCCCAGG
GTGTGGCCACCAGAGAGAGCAACAATATCCTTGTCGCTGAGGCCCATCTG
AGCACCGAAGACTTGCCTCAAGTGATCATTACCCTGTTTAGCATCAGGAA
GCCGGCCTTCTTGAGGTGGCTCAGCCTTGTCATCTCTTCCAGGGTGGAAG
GGGATATCGGGCCCACCGGTAACCTCAACGCCAACAACACCAGCAAGCTG
ATAAAGGTCAACGTACGAGATGGTAGGGAACTGCTCCTTGAACGGCTCCC
AAAGCCTAACGGCAATATCGAGGCCGTTGTTGGCTGAGTGTGCCTGCTCA
ACAGCGAGCCTCATGGTTCCGAACGGACCTCCGGTCTT
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