CF835481

Overview
NameCF835481
Unique NameCF835481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.203e-14
Identity = 54/184 (29.35%), Postives = 88/184 (47.83%), Query Frame = -1
Query:  254 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQL--PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 799
            +++ +++    F  +DVL+NNAG+       +   E+EWD  I TNL G      + CI+                     G +  PG   Y ++KAG+  +TK  A EL    I VN+++PG  +S++T+ L  +  L    L  +PL  FG  D  + + V +L  D +KY++G    V+ G
Sbjct:   69 VKAMIKEVVSQFGSLDVLVNNAGITRD-NLLMRMKEQEWDDVIDTNLKGV-----FNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDE--LKEQMLTQIPLARFG-QDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.203e-14
Identity = 54/184 (29.35%), Postives = 88/184 (47.83%), Query Frame = -1
Query:  254 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQL--PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 799
            +++ +++    F  +DVL+NNAG+       +   E+EWD  I TNL G      + CI+                     G +  PG   Y ++KAG+  +TK  A EL    I VN+++PG  +S++T+ L  +  L    L  +PL  FG  D  + + V +L  D +KY++G    V+ G
Sbjct:   69 VKAMIKEVVSQFGSLDVLVNNAGITRD-NLLMRMKEQEWDDVIDTNLKGV-----FNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDE--LKEQMLTQIPLARFG-QDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.203e-14
Identity = 54/184 (29.35%), Postives = 88/184 (47.83%), Query Frame = -1
Query:  254 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQL--PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 799
            +++ +++    F  +DVL+NNAG+       +   E+EWD  I TNL G      + CI+                     G +  PG   Y ++KAG+  +TK  A EL    I VN+++PG  +S++T+ L  +  L    L  +PL  FG  D  + + V +L  D +KY++G    V+ G
Sbjct:   69 VKAMIKEVVSQFGSLDVLVNNAGITRD-NLLMRMKEQEWDDVIDTNLKGV-----FNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDE--LKEQMLTQIPLARFG-QDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.203e-14
Identity = 54/184 (29.35%), Postives = 88/184 (47.83%), Query Frame = -1
Query:  254 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQL--PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 799
            +++ +++    F  +DVL+NNAG+       +   E+EWD  I TNL G      + CI+                     G +  PG   Y ++KAG+  +TK  A EL    I VN+++PG  +S++T+ L  +  L    L  +PL  FG  D  + + V +L  D +KY++G    V+ G
Sbjct:   69 VKAMIKEVVSQFGSLDVLVNNAGITRD-NLLMRMKEQEWDDVIDTNLKGV-----FNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDE--LKEQMLTQIPLARFG-QDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain COL) GN=fabG PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.203e-14
Identity = 54/184 (29.35%), Postives = 88/184 (47.83%), Query Frame = -1
Query:  254 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQL--PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 799
            +++ +++    F  +DVL+NNAG+       +   E+EWD  I TNL G      + CI+                     G +  PG   Y ++KAG+  +TK  A EL    I VN+++PG  +S++T+ L  +  L    L  +PL  FG  D  + + V +L  D +KY++G    V+ G
Sbjct:   69 VKAMIKEVVSQFGSLDVLVNNAGITRD-NLLMRMKEQEWDDVIDTNLKGV-----FNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDE--LKEQMLTQIPLARFG-QDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.203e-14
Identity = 56/187 (29.95%), Postives = 96/187 (51.34%), Query Frame = -1
Query:  245 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVC-IRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYL-IHDSSKYVSGNMFIVDAGATL 799
            +E+ ++ A +A+  +D+L+NNAG+       +   + +W   I  NLTG +L ++    I M+                 N GQ      Y+++KAG+   TK +A E    NI VN+++PG   S++T  L     +N   L+T+PL  +G  +  +  LV +L I+ +S YV+G +F +D G T+
Sbjct:  142 VEAMIKTAVDAWGTVDILVNNAGITRDGLL-MRMKKSQWQEVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNAGQ----ANYSAAKAGVIGFTKTVAREYASRNINVNAVAPGFISSDMTSKLGDD--INKKILETIPLGRYGQPE-EVAGLVEFLAINPASSYVTGQVFTIDGGMTM 320          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 1.203e-14
Identity = 53/185 (28.65%), Postives = 91/185 (49.19%), Query Frame = -1
Query:  245 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 799
            +++ +++    F  ID+L+NNAG+       +   E+EWD  I  NL G +  +K V  +M                       PG   Y ++KAG+  +TK  A EL   NI VN+I+PG   +++T+ L   K + +  LK +PL  FG     ++S+V +L  + ++Y++G    +D G  +
Sbjct:   69 VQNMIKETLSVFSTIDILVNNAGITRD-NLIMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGN---PGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTDKL--AKDVQDEMLKQIPLARFGEPSD-VSSVVTFLASEGARYMTGQTLHIDGGMVM 246          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: IDNO_ECOLI (Gluconate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=idnO PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.052e-14
Identity = 54/183 (29.51%), Postives = 93/183 (50.82%), Query Frame = -1
Query:  254 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 799
            I+++V+   +    IDVL+NNAG++   + P  ++ E+EW+  I  N T  +LVS+ V   M +                 R  +     YA+SK  +  +T+ M +EL  HNI+VN I+PG F +E+T+ L++ +       K  P   +G     + + V +L   +S +V+G++  VD G
Sbjct:   73 IDAAVEHIEKDIGPIDVLVNNAGIQR--RHPFTEFPEQEWNDVIAVNQTAVFLVSQAVTRHMVERKAGKVINICSMQSELGRDTI---TPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAV-FLSSKASDFVNGHLLFVDGG 249          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: IDNO_ECOL6 (Gluconate 5-dehydrogenase OS=Escherichia coli O6 GN=idnO PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.052e-14
Identity = 54/183 (29.51%), Postives = 93/183 (50.82%), Query Frame = -1
Query:  254 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 799
            I+++V+   +    IDVL+NNAG++   + P  ++ E+EW+  I  N T  +LVS+ V   M +                 R  +     YA+SK  +  +T+ M +EL  HNI+VN I+PG F +E+T+ L++ +       K  P   +G     + + V +L   +S +V+G++  VD G
Sbjct:   73 IDAAVEHIEKDIGPIDVLVNNAGIQR--RHPFTEFPEQEWNDVIAVNQTAVFLVSQAVTRHMVERKAGKVINICSMQSELGRDTI---TPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAV-FLSSKASDFVNGHLLFVDGG 249          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: FABG_CHLTR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia trachomatis GN=fabG PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 4.572e-14
Identity = 58/182 (31.87%), Postives = 85/182 (46.70%), Query Frame = -1
Query:  254 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 799
            + + VQ     +  IDV++NNAG+       +  +EEEW   I TNL   + V   V   M                   RG  PG   YA++KAG+   +K ++ E+G  NIRVN I+PG   +++T+ L     L N  LK VPL   G  +  +     +L  D S Y++G +  VD G
Sbjct:   72 VSAQVQNFLAEYNTIDVIVNNAGITRDALL-MRMSEEEWSSVINTNLGSIYNVCSAVIRPM--IKARSGAIINISSIVGLRGS-PGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTKSLNDN--LKNEWLKGVPLGRVGMPE-EIAKAALFLASDGSSYITGQVLSVDGG 246          
The following BLAST results are available for this feature:
BLAST of CF835481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
FABG_STAAS1.203e-1429.353-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAR1.203e-1429.353-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAN1.203e-1429.353-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAM1.203e-1429.353-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAC1.203e-1429.353-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_CUPLA1.203e-1429.953-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
FABG_BACSU1.203e-1428.653-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]
IDNO_ECOLI2.052e-1429.51Gluconate 5-dehydrogenase OS=Escherichia coli (str... [more]
IDNO_ECOL62.052e-1429.51Gluconate 5-dehydrogenase OS=Escherichia coli O6 G... [more]
FABG_CHLTR4.572e-1431.873-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01E22_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835481 ID=CF835481; Name=CF835481; organism=Citrus sinensis; type=EST; length=799bp
TTTTTTTTTTTTTTTTTATAAAATCGACAATAGTCGTAAGTTTTTTCAAT
ACAACATTTTAAACAAACTACAATGGTCATAAGTTTTTCCAATACTGCAG
TTTATCAAAATTCGATTGTCATAAGTTTTTCCAATACAATGTTTAAACAA
ACTTCAGCCAGAACCCTAGCAACAGAATGAGGAATACTACACTAACTCAC
ATTTTTCTAGGAACTCAAAGGGAAGAGAAAATAGGGACACCAGGAAGTGT
AGCCCCTGCATCCACAATGAACATGTTTCCTGAAACATATTTGGAAGAGT
CATGAATTAAATACCTAACAAGTGATGTCAATGCTGGATCTGAGGTGCCA
AATTCTCTTAAAGGGACGGTTTTCAAGGCAACATTATTTAGCCATTTTTT
TTGCATAAGACCTTCAGTAATCTCAGATATGAAAAGTCCAGGTGATATTG
AGTTAACTCTGATGTTGTGCACCCCCAGTTCCAATGCCATGACCTTAGTC
ATGGAATTAAGGCCTGCCTTGGAAGAAGCATAGGCAACACCTCCAGGTAA
CTGTCCACGATTAATACCAGCAATAGAAGATATGTTAATTATTGATCCTC
CCAGATTTGCATCACGCATTCGAATGCATACATACTTGGAAACCAACCAA
GATCCTGTTAAATTCGTTTTGATATTGTGATCCCACTCCTCCTCGGTCCA
ATCCAACGGACTCTTCACACTGCCTCTAACACCGGCATTATTAATCAAAA
CATCGATTCGCCAGAAGGCTTCCCAAGCCTTCTGTACGGAACTCTCAAT
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