CF835481

Overview
NameCF835481
Unique NameCF835481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: Y1385_MYCBO (Uncharacterized oxidoreductase Mb1385 OS=Mycobacterium bovis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.798e-14
Identity = 55/182 (30.22%), Postives = 89/182 (48.90%), Query Frame = -1
Query:  254 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 799
            ++  ++ A E F  +DV++NNAG+     +    TEE++D  I  +L G+W  ++     MR+                    + G   Y+++KAG+  MTK  A EL    IRVN+I+PGL  S +TE + Q+ W  +  L  VP+   G     + S+  +L  D S Y++G +  V  G
Sbjct:   70 VDILIRTAVERFGGLDVMVNNAGITRDA-TMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVG---MVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIW--DQKLAEVPMGRAG-EPSEVASVAVFLASDLSSYMTGTVLDVTGG 244          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: Y1350_MYCTU (Uncharacterized oxidoreductase Rv1350/MT1393 OS=Mycobacterium tuberculosis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.798e-14
Identity = 55/182 (30.22%), Postives = 89/182 (48.90%), Query Frame = -1
Query:  254 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 799
            ++  ++ A E F  +DV++NNAG+     +    TEE++D  I  +L G+W  ++     MR+                    + G   Y+++KAG+  MTK  A EL    IRVN+I+PGL  S +TE + Q+ W  +  L  VP+   G     + S+  +L  D S Y++G +  V  G
Sbjct:   70 VDILIRTAVERFGGLDVMVNNAGITRDA-TMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVG---MVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIW--DQKLAEVPMGRAG-EPSEVASVAVFLASDLSSYMTGTVLDVTGG 244          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: GNO_GLUOX (Gluconate 5-dehydrogenase OS=Gluconobacter oxydans GN=gno PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.330e-13
Identity = 48/172 (27.91%), Postives = 89/172 (51.74%), Query Frame = -1
Query:  245 IDVLINNAGVRGSVKSPLD-WTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 757
            ID+LINNAG++   ++PL+ ++ ++WD  + TN+   + V + V   M                   R   PG   Y ++K  + ++TK MA + G H +++N ++PG F +E+TE L+  +   +   K  P   +G  +  + + V +L   +S +V+G + +VD G T+
Sbjct:   89 IDILINNAGIQR--RAPLEEFSRKDWDDLMSTNVNAVFFVGQAVARHMIPRGRGKIVNICSVQSELAR---PGIAPYTATKGAVKNLTKGMATDWGRHGLQINGLAPGYFATEMTERLVADEEFTDWLCKRTPAGRWGQVEELVGAAV-FLSSRASSFVNGQVLMVDGGITV 254          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: CBR2_PIG (Carbonyl reductase [NADPH] 2 OS=Sus scrofa GN=CBR2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.330e-13
Identity = 56/182 (30.77%), Postives = 89/182 (48.90%), Query Frame = -1
Query:  254 WEAFWR-------IDVLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 775
            WEA  R       +D+L+NNA V  ++  P LD T+E +D +   NL   + VS+ V   M +                     PG  AY+S+K  +  +TK MA+ELG H IRVNS++P + ++ +   +     L     +  P+R+F   +  + S++ +L+ D S   SG+   VDAG
Sbjct:   64 WEATERALGGVGPVDLLVNNAAV--ALMQPFLDTTKEVFDRSFNVNLRSVFQVSQIVARSMIERGVPGSIVNVSSMVSHVT--YPGLAAYSSTKGAMTMLTKSMAMELGPHKIRVNSVNPTVVLTAMGRSVTSDPELARKLKERHPMRKFAEVEDVVNSIL-FLLSDRSASTSGSSIFVDAG 240          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: YOHF_ECOLI (Uncharacterized oxidoreductase yohF OS=Escherichia coli (strain K12) GN=yohF PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.737e-13
Identity = 57/183 (31.15%), Postives = 87/183 (47.54%), Query Frame = -1
Query:  245 SVQKAWEAFWRIDVLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 790
            +++K  +   RIDVL+NNAG     K+P LD   +EW      ++ G++L S+    +M                      LP   AY ++K  L  +TK MALEL  H I VN+++PG   + +    M    +   A  ++PLR FG +   + SLV +L  + + Y +G   IVD G  L
Sbjct:   70 ALEKLIQRLGRIDVLVNNAGAM--TKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQM--VKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRHKILVNAVAPGAIATPMNG--MDDSDVKPDAEPSIPLRRFGATH-EIASLVVWLCSEGANYTTGQSLIVDGGFML 245          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: YGCW_ECOLI (Uncharacterized oxidoreductase ygcW OS=Escherichia coli (strain K12) GN=ygcW PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 51/173 (29.48%), Postives = 83/173 (47.98%), Query Frame = -1
Query:  254 EAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 772
            E F  +D+L+NNAG+   +   LD+   +WD  I  NLT ++ +S Y   ++                    GQ     AY+++K  L   TK    ELG +NI+VN I+PG + ++IT         N   L  +P   +G +   + + V +L   +S YV+G++ +VD G
Sbjct:   90 ERFGTVDILVNNAGIC-KLNKVLDFGRADWDPMIDVNLTAAFELS-YEAAKIMIPQKSGKIINICSLFSYLGGQW--SPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAV-FLASPASNYVNGHLLVVDGG 257          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: Y4MP_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4mP OS=Rhizobium sp. (strain NGR234) GN=NGR_a02430 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.963e-13
Identity = 53/180 (29.44%), Postives = 91/180 (50.56%), Query Frame = -1
Query:  254 SSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 793
            S+  +   AF   ++LINNAG+   VK+ LD ++ +W   +  N+TG   +S+     MR                   G + GG  Y+++KAG+  + K MA E G  +IRVN ++PGL  ++IT   +  +   ++ +K +PL   G +   + ++  +L  D S YV+G +  V+ G
Sbjct:   74 SASDEVLSAFGVANILINNAGITQPVKT-LDISDADWQRIVAVNMTGVLNLSQVFIPNMRQNGGGSIACMSSVSAQRGGG-IFGGPHYSAAKAGVLGLAKAMAREFGPDSIRVNCVTPGLIQTDITGDKLSAEMRADI-VKGIPLSRLGDARD-VANIYLFLASDLSAYVTGAVIDVNGG 249          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: FABG1_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Synechocystis sp. (strain PCC 6803) GN=fabG1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.601e-13
Identity = 53/186 (28.49%), Postives = 88/186 (47.31%), Query Frame = -1
Query:  245 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD-SSKYVSGNMFIVDAGATL 799
            ++  ++   + F RIDVL+NNAG+       L    E+W   I  NLTG +L +K V   M                       PG   Y+++KAG+   TK +A EL    + VN+++PG   +++TE L  +       L+ +PL  +G  +  +   +R+L  D ++ Y++G  F VD G  +
Sbjct:   71 VDQLIKTTLDKFSRIDVLVNNAGITRDTLL-LRMKLEDWQAVIDLNLTGVFLCTKAVSKLMLKQKSGRIINITSVAGMMGN---PGQANYSAAKAGVIGFTKTVAKELASRGVTVNAVAPGFIATDMTENLNAEP-----ILQFIPLARYGQPE-EVAGTIRFLATDPAAAYITGQTFNVDGGMVM 246          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: FABG_AQUAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Aquifex aeolicus GN=fabG PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.126e-12
Identity = 54/185 (29.19%), Postives = 96/185 (51.89%), Query Frame = -1
Query:  254 ESSVQKAWEAFWR----IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 796
            E S+ KA+E  +     ID+L+NNAG+    K  L  +  +W+  +K NLTG++LV++    +M                    G + G V Y+++KAGL   TK +A EL   N+ VN+++PG   +++T  L ++  +     + +PL  FG S   + ++V +L  + + Y++G +  V+ G
Sbjct:   69 EESINKAFEEIYNLVDGIDILVNNAGITRD-KLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKM--IKQRWGRIVNISSVVGFTGNV-GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEE--IKQKYKEQIPLGRFG-SPEEVANVVLFLCSELASYITGEVIHVNGG 246          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: FABG_CHLPN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia pneumoniae GN=fabG PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.921e-12
Identity = 52/187 (27.81%), Postives = 89/187 (47.59%), Query Frame = -1
Query:  248 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL---MQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGAT 799
            ++  VQK  +   +ID+L+NNAG+       +  +E++W   I TNLT  +     V   +R                  +    G   YA++KAG+ + TK +A E+   NIRVN ++PG   +++T  L   ++ +W     LK++PL   GT +  +  +  +L    S Y++    +VD G T
Sbjct:   71 VKDCVQKFLDKHNKIDILVNNAGITRD-NLLMRMSEDDWQSVISTNLTSLYYTCSSV---IRHMIKARSGSIINVASIVAKIGSAGQTNYAAAKAGIIAFTKSLAKEVAARNIRVNCLAPGFIETDMTSVLNDNLKAEW-----LKSIPLGRAGTPED-VARVALFLASQLSSYMTAQTLVVDGGLT 247          
The following BLAST results are available for this feature:
BLAST of CF835481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
Y1385_MYCBO7.798e-1430.22Uncharacterized oxidoreductase Mb1385 OS=Mycobacte... [more]
Y1350_MYCTU7.798e-1430.22Uncharacterized oxidoreductase Rv1350/MT1393 OS=My... [more]
GNO_GLUOX1.330e-1327.91Gluconate 5-dehydrogenase OS=Gluconobacter oxydans... [more]
CBR2_PIG1.330e-1330.77Carbonyl reductase [NADPH] 2 OS=Sus scrofa GN=CBR2... [more]
YOHF_ECOLI1.737e-1331.15Uncharacterized oxidoreductase yohF OS=Escherichia... [more]
YGCW_ECOLI2.269e-1329.48Uncharacterized oxidoreductase ygcW OS=Escherichia... [more]
Y4MP_RHISN2.963e-1329.44Uncharacterized short-chain type dehydrogenase/red... [more]
FABG1_SYNY36.601e-1328.493-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Sy... [more]
FABG_AQUAE1.126e-1229.193-oxoacyl-[acyl-carrier-protein] reductase OS=Aqui... [more]
FABG_CHLPN1.921e-1227.813-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01E22_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835481 ID=CF835481; Name=CF835481; organism=Citrus sinensis; type=EST; length=799bp
TTTTTTTTTTTTTTTTTATAAAATCGACAATAGTCGTAAGTTTTTTCAAT
ACAACATTTTAAACAAACTACAATGGTCATAAGTTTTTCCAATACTGCAG
TTTATCAAAATTCGATTGTCATAAGTTTTTCCAATACAATGTTTAAACAA
ACTTCAGCCAGAACCCTAGCAACAGAATGAGGAATACTACACTAACTCAC
ATTTTTCTAGGAACTCAAAGGGAAGAGAAAATAGGGACACCAGGAAGTGT
AGCCCCTGCATCCACAATGAACATGTTTCCTGAAACATATTTGGAAGAGT
CATGAATTAAATACCTAACAAGTGATGTCAATGCTGGATCTGAGGTGCCA
AATTCTCTTAAAGGGACGGTTTTCAAGGCAACATTATTTAGCCATTTTTT
TTGCATAAGACCTTCAGTAATCTCAGATATGAAAAGTCCAGGTGATATTG
AGTTAACTCTGATGTTGTGCACCCCCAGTTCCAATGCCATGACCTTAGTC
ATGGAATTAAGGCCTGCCTTGGAAGAAGCATAGGCAACACCTCCAGGTAA
CTGTCCACGATTAATACCAGCAATAGAAGATATGTTAATTATTGATCCTC
CCAGATTTGCATCACGCATTCGAATGCATACATACTTGGAAACCAACCAA
GATCCTGTTAAATTCGTTTTGATATTGTGATCCCACTCCTCCTCGGTCCA
ATCCAACGGACTCTTCACACTGCCTCTAACACCGGCATTATTAATCAAAA
CATCGATTCGCCAGAAGGCTTCCCAAGCCTTCTGTACGGAACTCTCAAT
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