CF835492

Overview
NameCF835492
Unique NameCF835492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:9..762. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.430e-32
Identity = 77/190 (40.53%), Postives = 106/190 (55.79%), Query Frame = 2
Query:  122 NEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSR-AEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 685
            ++ +  L  +FYK++CP    ++R  VK    R      S LR  FHDC V  CD SLLLD T   L EK    S   +R F  I+ IK  VE+ CPG+VSCADIL ++ RD V+ LGGP   +K GRRD   +  A      +P    ++S ++ RF A G+    +VAL G+H++GR  CV   +R+Y
Sbjct:   15 SQSEAQLNRDFYKESCPSLFLVVRRVVKRAVAREPRMGASLLRLFFHDCFVNGCDGSLLLDDTPSFLGEKTSGPSNNSVRGFEVIDKIKFKVEKMCPGIVSCADILAITARDSVLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTRDMVALSGAHTIGRAQCVTFRNRIY 204          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.785e-32
Identity = 75/206 (36.41%), Postives = 113/206 (54.85%), Query Frame = 2
Query:  149 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 745
            +FY  TCPQ  DI    +K   +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K AVE+ CP  VSCAD+L ++ +  VV  GGP   + +GRRD  +   ++    LP  + ++ V+ ++F  +G+D P  LVAL G H+ G+  C  ++ RLY      + DP L+  ++  +  +CP
Sbjct:   29 SFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYLSTLRKQCP 234          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.556e-32
Identity = 69/182 (37.91%), Postives = 103/182 (56.59%), Query Frame = 2
Query:  137 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL 682
            GL M +Y  +CP AE I++  V    +     A   +R +FHDC ++ CDAS+LLDST+   +EK+   +  +R +  I++ KE +E  CPGVVSCADI+ ++ RD V   GGPY  +  GR DG++S+ E     LP    + S +++ F   G     +VAL G+H++G   C     RL
Sbjct:   25 GLSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDSPANLSLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRSKIEDTRN-LPSPFLNASQLIQTFGQRGFTPQDVVALSGAHTLGVARCSSFKARL 205          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.556e-32
Identity = 79/212 (37.26%), Postives = 118/212 (55.66%), Query Frame = 2
Query:  140 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHR--LYPE-----VDPALNPDHVPHMLHKCPDAI 754
            L  NFY  +CP AE I+R  V+       +     LR IFHDC VQ CD S+L+   R   +E+    +  +  F  IE++K  +E  CPG VSCADILVL+ RD V ALGGP +P+ TGRRDGR S A  +   + D + ++  ++  F++ G+    LV L G+H++G  HC     R  L P+     +D +L+  +   +++KC  ++
Sbjct:   31 LSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLI---RGNGTERSDPGNASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAAHCNTFNSRFKLDPKGNLELIDASLDNSYAQTLVNKCSSSL 239          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.868e-32
Identity = 77/207 (37.20%), Postives = 111/207 (53.62%), Query Frame = 2
Query:  137 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY----PEVDPALNPDHVPHMLHKCP 745
            G  + FY  TCP+AE I+R  V   +      A   LR  FHDC VQ CD S+L+       +E+    +  ++ F  I+N K  +E  CPGVVSCADIL L+ RD V+   G    + TGRRDGR S A      LP   DS++V  ++F+A+G++   LV L+G H++G   C    +RL+       DP ++P  +  +  +CP
Sbjct:   34 GTRIGFYLTTCPRAETIVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILISGAN---TERTAGPNLNLQGFEVIDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQVPTGRRDGRVSLASNANN-LPGPRDSVAVQQQKFSALGLNTRDLVVLVGGHTIGTAGCGVFRNRLFNTTGQTADPTIDPTFLAQLQTQCP 236          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.289e-31
Identity = 79/208 (37.98%), Postives = 112/208 (53.85%), Query Frame = 2
Query:  137 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRK-SRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDA 751
            GL  NFY+  CP+ E+IIR+++K ++KR    A + LR  FHDC VQ C+AS+LL  +     E+    +  +R   F  I N++  V+++C  VVSC+DIL L+ RD VV  GGP   +  GRRD    +  E     LP    + S ++  FA   ++   LVAL G H++G  HC     RLYP  DP +N      +   CP A
Sbjct:   43 GLSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLLAGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHCPSFTDRLYPNQDPTMNQFFANSLKRTCPTA 250          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.871e-31
Identity = 70/182 (38.46%), Postives = 105/182 (57.69%), Query Frame = 2
Query:  140 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL 682
            L+  FYK++CP AE+I++  +++   +    A S LR  FHDC V  CDAS+LLD+    LSEK+   +   +R F  I+ IK  +E  CP  VSC+DIL L+ RD V   GGP+  +  GRRD  K+      Q++P  N S+  ++  F   G++   L+AL G+H++G+  CV    R+
Sbjct:   30 LLKGFYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQDLIALSGAHTIGKARCVSFKQRI 211          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 3.750e-31
Identity = 71/186 (38.17%), Postives = 103/186 (55.38%), Query Frame = 2
Query:  140 LVMNF--YKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP 688
            LV++F  Y+++CP+AE I+   V+         A S LR  FHDC V  CDAS+LLD T   + EK    +   +R F  I++IK  +E  CP  VSCADIL ++ RD VV  GGP   ++ GR+D R +  +     LP  N ++S ++  F  +G+    +VAL G H++G+  C     RL P
Sbjct:   48 LVLDFGLYRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLSQTDMVALSGGHTLGKARCTSFTARLQP 233          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.898e-31
Identity = 75/207 (36.23%), Postives = 115/207 (55.56%), Query Frame = 2
Query:  140 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHM-LHKC 742
            L MNFY  +CP AE II + ++       + A   +R  FHDC V+ CD S+L++ST    +E++   +  +R F ++E IK  +E+ CP  VSCADI+ L+ RD VVA GGP   + TGRRDGR S        +P    + + +   F   G++   LV L G+H++G +HC  +  RLY      + DP+L+  +  ++  +KC
Sbjct:   29 LQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTSGN-AERDAPPNLTLRGFGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPSWSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLNLKDLVLLSGAHTIGVSHCSSMNTRLYNFSTTVKQDPSLDSQYAANLKANKC 234          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 4.898e-31
Identity = 80/211 (37.91%), Postives = 115/211 (54.50%), Query Frame = 2
Query:  140 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM--DRSFGMRNFRYIENIKEAVERE--CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 745
            L  NFY+ +CP  E I+R  V+  +++   TA + LR  FHDC V+ CDAS+LL S     SEK+   D+S     F  +   K+A++R+  C   VSCADIL L+ RD VV  GGP  P++ GRRDGR S    ++  LP  +  +  +   FA  G+    ++AL G+H++G  HC K   R+Y       +DP LN  +   +   CP
Sbjct:   25 LQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASP----SEKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGKFSKRIYNFSPKRPIDPTLNIRYALQLRQMCP 231          
The following BLAST results are available for this feature:
BLAST of CF835492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER67_ARATH4.430e-3240.53Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER2_ARMRU5.785e-3236.41Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER47_ARATH7.556e-3237.91Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER18_ARATH7.556e-3237.26Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER71_ARATH9.868e-3237.20Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER12_ARATH1.289e-3137.98Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER20_ARATH2.871e-3138.46Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER40_ARATH3.750e-3138.17Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER30_ARATH4.898e-3136.23Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER16_ARATH4.898e-3137.91Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01F08_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835492 ID=CF835492; Name=CF835492; organism=Citrus sinensis; type=EST; length=754bp
CCGTAGGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAGAAAATGGGTA
CGAAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCT
CTGAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAA
TTTTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAGGGAACAAG
TTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCTTAGA
AACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCT
GGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGAGCTTTG
GTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAGA
GAGTGCCCTGGTGTTGTTTCCTGTGCTGATATCCTTGTCCTGTCCGGTAG
AGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAA
GAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCA
GATCACAATGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGG
CATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCA
GAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCT
GCACTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCCTGATGC
AATC
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