CF835492

Overview
NameCF835492
Unique NameCF835492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.819e-29
Identity = 71/211 (33.65%), Postives = 114/211 (54.03%), Query Frame = 2
Query:  140 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTR--KTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 745
            L  ++Y   CPQ E ++       +K    +A + +R  FHDC V+ CD S+L+++ +  K L+E+E   +  +R   F  I   K  VE  CP +VSC+DIL ++ RD +   GGPY  +K GR DG++S A+ +   +P  N ++  +++ FA+ G+    LV L GSH++G  HC   + RLY        DP+L+   +  +   CP
Sbjct:   42 LSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVEELVVLSGSHTIGFAHCKNFLGRLYDYKGTKRPDPSLDQRLLKELRMSCP 252          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.021e-28
Identity = 71/205 (34.63%), Postives = 113/205 (55.12%), Query Frame = 2
Query:  152 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERE--CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 745
            FY+++CP  E I+R  V+  +++   TA + LR  FHDC V+ CDAS+++ S  +   +   D S     F  +   K+AV+    C   VSCADIL L+ R+ VV  GGP  P++ GRRDGR S    ++  LP    +++ +   F+  G+    ++AL G+H++G  HC K+  R+Y       +DP++N  +V  +   CP
Sbjct:   31 FYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMIASPSER--DHPDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLSQTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSINRGYVVQLKQMCP 233          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.021e-28
Identity = 73/206 (35.44%), Postives = 112/206 (54.37%), Query Frame = 2
Query:  149 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 745
            +FY  TCP   +II + +    +     A S LR  FHDC V+ CDAS+LLD++    +EK+       +R F  I+ +K A+ER CP  VSCADI+ ++ +  V+  GGP+ P+  GRRD  ++   +    LP    +++ +   FA +G++ P  LVAL G H+ G+  C  +  RLY        DP+LNP ++  +   CP
Sbjct:   34 DFYFRTCPPIFNIIGDTIVNELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNKNSVRGFDVIDRMKAAIERACPRTVSCADIITIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLYNFNGTNRPDPSLNPTYLVELRRLCP 239          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.334e-28
Identity = 68/193 (35.23%), Postives = 101/193 (52.33%), Query Frame = 2
Query:  122 NEEDPGLVMN----FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 685
            N    GL  N    FY  +CP+ + I++  V   +K     A S LR  FHDC V  CD S+LL+ +     EK    +   +R F  IE+IK  +E  CP  VSCADI+ L+ R+ VV  GGP+ P+  GRRD   +  +     LP   +++  +  +F  +G+D   +V L G+H++G   C  + HRL+
Sbjct:   38 NGHGHGLTSNLNYRFYDRSCPRLQTIVKSGVWRAFKDDSRIAASLLRLHFHDCFVNGCDGSILLNDSEDFKGEKNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQCFVIKHRLF 230          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.742e-28
Identity = 75/208 (36.06%), Postives = 106/208 (50.96%), Query Frame = 2
Query:  137 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL-GSHSVGRTHCVKLVHRLYPE----VDPALNPDHVPHMLHKCP 745
            G  + FY  TCP AE I+R  V   +      A   LR   HDC VQ CD S+LL       SE+    +  +  F  I++ K  +E  CPGVVSCADIL L+ RD V    G    + TGRRDGR S A  +   LP  +DS+++   +F+A  ++   LV L+ G H++G   C  + +R++       DP ++   VP +   CP
Sbjct:   24 GTRIGFYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSVLLSGPN---SERTAGANVNLHGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQVPTGRRDGRVSLASNVNN-LPSPSDSLAIQQRKFSAFRLNTRDLVTLVGGGHTIGTAACGFITNRIFNSSGNTADPTMDQTFVPQLQRLCP 227          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28
Identity = 73/211 (34.60%), Postives = 109/211 (51.66%), Query Frame = 2
Query:  140 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRK--TLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY------PEVDPALNPDHVPHMLHKCP 745
            L  +FY  TCP    I R  ++   +         +R  FHDC V  CD S+LLD+        EKE  ++ G +  F  I++IK A+E  CPGVVSCADIL ++    V   GGP + +  GRRDGR +        LP   DS+ ++  +F+   +D   LVAL G+H+ GR  C  + +RL+       + DP++ P+ +  +  +CP
Sbjct:   25 LTSDFYSTTCPNVTAIARGLIERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKFSVHNLDTTDLVALSGAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRRQCP 235          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28
Identity = 74/212 (34.91%), Postives = 111/212 (52.36%), Query Frame = 2
Query:  131 DPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 745
            D  L   FY  +CP   +I+R+ +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+ +  +   R F  I+ +K AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD  ++  ++    LP    ++  +   F  +G+D P  LVAL G+H+ G+  C  ++ RLY        DP LN  ++  +  +CP
Sbjct:   30 DAQLTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVNGCDASILLDNTTSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCP 241          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28
Identity = 76/206 (36.89%), Postives = 111/206 (53.88%), Query Frame = 2
Query:  149 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 745
            +FY  TCP   DII   +    +     A S LR  FHDC V+ CDAS+LLD++    +EK+    +   R F  I+ +K A+ER CPG VSCADIL ++ +  V+  GGP+ P+  GRRD  ++   +    LP    +++ +   FA +G++    LVAL G H+ GR  C  +  RLY        DP+LNP ++  +   CP
Sbjct:   34 DFYFGTCPFVFDIIGNIIVDELQTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFNVIDRMKVALERACPGRVSCADILTIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFFNLTQLKTAFADVGLNRTSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNSPDPSLNPTYLVELRRLCP 239          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.068e-28
Identity = 69/183 (37.70%), Postives = 96/183 (52.46%), Query Frame = 2
Query:  140 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 685
            L   FY+ +CPQA++I+   ++    +    A S LR  FHDC VQ CDAS+LLD +    SEK        +R F+ I+ IK  +E+ CP  VSCADIL L+ R   +  GGP   L  GRRD R +        +P  N ++  +L  F   G++   LV+L G H++G   C     RLY
Sbjct:   45 LYPQFYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTFKQRLY 227          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.619e-28
Identity = 75/209 (35.89%), Postives = 107/209 (51.20%), Query Frame = 2
Query:  140 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 745
            L   FY  +CP   +I+RE +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD  ++  E+    LP    ++  +   F  +G+D P  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +   CP
Sbjct:   32 LTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLNTTYLQTLRGLCP 240          
The following BLAST results are available for this feature:
BLAST of CF835492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER19_ARATH7.819e-2933.65Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER45_ARATH1.021e-2834.63Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER23_ARATH1.021e-2835.44Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER10_ARATH1.334e-2835.23Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER62_ARATH1.742e-2836.06Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER58_ARATH2.971e-2834.60Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER33_ARATH2.971e-2834.91Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER22_ARATH2.971e-2836.89Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]
PER9_ARATH5.068e-2837.70Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER34_ARATH6.619e-2835.89Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_01F08_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835492 ID=CF835492; Name=CF835492; organism=Citrus sinensis; type=EST; length=754bp
CCGTAGGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAGAAAATGGGTA
CGAAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCT
CTGAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAA
TTTTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAGGGAACAAG
TTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCTTAGA
AACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCT
GGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGAGCTTTG
GTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAGA
GAGTGCCCTGGTGTTGTTTCCTGTGCTGATATCCTTGTCCTGTCCGGTAG
AGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAA
GAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCA
GATCACAATGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGG
CATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCA
GAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCT
GCACTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCCTGATGC
AATC
back to top