CF835501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835501 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSJ (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. japonica GN=HOX2 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.257e-39 Identity = 89/143 (62.24%), Postives = 103/143 (72.03%), Query Frame = 1 Query: 190 ELEMERACSRGISDDE--DGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKL--SPQFYMQMTPPT----TLTMCPSCER 594 E E+ER+ S G+ DD+ DG RKKLRLSKDQ+A+LEE FK H+TLNP GLRPRQVEVWFQNRRARTKLKQTEVDCE+LKR CE L +EN+RL+KE+ +LRALK SP M P + TLTMCPSC R Sbjct: 92 ERELERSGS-GVDDDDGADGAGGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRLEKELADLRALKAAPSPASASAMQPSSSAAATLTMCPSCRR 233
BLAST of CF835501 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSI (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. indica GN=HOX2 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.257e-39 Identity = 89/143 (62.24%), Postives = 103/143 (72.03%), Query Frame = 1 Query: 190 ELEMERACSRGISDDE--DGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKL--SPQFYMQMTPPT----TLTMCPSCER 594 E E+ER+ S G+ DD+ DG RKKLRLSKDQ+A+LEE FK H+TLNP GLRPRQVEVWFQNRRARTKLKQTEVDCE+LKR CE L +EN+RL+KE+ +LRALK SP M P + TLTMCPSC R Sbjct: 92 ERELERSGS-GVDDDDGADGAGGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRLEKELADLRALKAAPSPASASAMQPSSSAAATLTMCPSCRR 233
BLAST of CF835501 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSJ (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. japonica GN=HOX28 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.618e-37 Identity = 84/146 (57.53%), Postives = 98/146 (67.12%), Query Frame = 1 Query: 157 GKRSEREPNGDELEMERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCER 594 GKR +GDE++ + C G G +RKKLRLSKDQ+A+LEE FK H+TL P LRPRQVEVWFQNRRARTKLKQTEVDCE LKR C+ L ++NRRL KE+ ELRALK +P P TTLTMC SC+R Sbjct: 68 GKRGSGSGSGDEVD-DAGCDVG------GGGARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADDNRRLHKELAELRALKATPTPPAAAPPLTTLTMCLSCKR 206
BLAST of CF835501 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSI (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. indica GN=HOX28 PE=2 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.618e-37 Identity = 84/146 (57.53%), Postives = 98/146 (67.12%), Query Frame = 1 Query: 157 GKRSEREPNGDELEMERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCER 594 GKR +GDE++ + C G G +RKKLRLSKDQ+A+LEE FK H+TL P LRPRQVEVWFQNRRARTKLKQTEVDCE LKR C+ L ++NRRL KE+ ELRALK +P P TTLTMC SC+R Sbjct: 68 GKRGSGSGSGDEVD-DAGCDVG------GGGARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADDNRRLHKELAELRALKATPTPPAAAPPLTTLTMCLSCKR 206
BLAST of CF835501 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSI (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. indica GN=HOX7 PE=1 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.789e-36 Identity = 92/206 (44.66%), Postives = 112/206 (54.37%), Query Frame = 1 Query: 7 FPL*IQTLSLVAPRPASFLRGIDVNRLPSHADNEEEXXXXXXXXXXXXXXGKRSEREPNGDELEMERACSRGISDDED--GDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR-ALKLSPQFY--------MQMTPPTTLTMCPSCE 591 FPL + + + RG DVN P+ E G+ S + ++ + +DDED G +RKKLRLSK+QS+ LE+SFKEH+TL P LRPRQVEVWFQNRRARTKLKQTEVDCE LKRCCE LT ENRRLQ+EV ELR AL+ + Y + T +CPSCE Sbjct: 83 FPLFVSSAETGSANSEMCTRGFDVNTRPADGGAEA---------------GRPSSPSSMQEASTRQQVADQEAADDEDNGGGGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGALRTTTSSYPPLYGLHHLPAAAGTVFRVCPSCE 273
BLAST of CF835501 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSJ (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. japonica GN=HOX7 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.204e-36 Identity = 91/206 (44.17%), Postives = 111/206 (53.88%), Query Frame = 1 Query: 7 FPL*IQTLSLVAPRPASFLRGIDVNRLPSHADNEEEXXXXXXXXXXXXXXGKRSEREPNGDELEMERACSRGISDDED--GDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR-ALKLSPQFY--------MQMTPPTTLTMCPSCE 591 FPL + + + RG DVN P+ E G+ S + ++ + +DDED G +RKKLRLSK+QS+ LE+SFKEH+TL P LRPRQVEVWFQNRRARTKLKQTEVDCE LKRCCE LT ENRRLQ+EV ELR L+ + Y + T +CPSCE Sbjct: 83 FPLFVSSAETGSANSEMCTRGFDVNTRPADGGAEA---------------GRPSSPSSMQEASTRQQVADQEAADDEDNGGGGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGTLRTTTSSYPPLYGLHHLPAAAGTVFRVCPSCE 273
BLAST of CF835501 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSJ (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.729e-34 Identity = 81/151 (53.64%), Postives = 99/151 (65.56%), Query Frame = 1 Query: 157 GKRSEREPNGDELEMERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYM-----QMTPPTTLTMCPSCER 594 G E P G E E RG+ G KKLRLSK+QS +LEESF+ ++TL P LRPRQVEVWFQNRRARTKLKQTE++CE+LKRC +LTEENRRLQ+EV+ELRA++++P + Q P + LTMCP CER Sbjct: 51 GGEEEEFPMGSVEEDEE--ERGVG----GPHRPKKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRAMRVAPPTVLSPHTRQPLPASALTMCPRCER 195
BLAST of CF835501 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSI (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.729e-34 Identity = 81/151 (53.64%), Postives = 99/151 (65.56%), Query Frame = 1 Query: 157 GKRSEREPNGDELEMERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYM-----QMTPPTTLTMCPSCER 594 G E P G E E RG+ G KKLRLSK+QS +LEESF+ ++TL P LRPRQVEVWFQNRRARTKLKQTE++CE+LKRC +LTEENRRLQ+EV+ELRA++++P + Q P + LTMCP CER Sbjct: 51 GGEEEEFPMGSVEEDEE--ERGVG----GPHRPKKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRAMRVAPPTVLSPHTRQPLPASALTMCPRCER 195
BLAST of CF835501 vs. ExPASy Swiss-Prot
Match: ATB17_ARATH (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.954e-32 Identity = 74/140 (52.86%), Postives = 97/140 (69.29%), Query Frame = 1 Query: 193 LEMERACSRGISDDE-----DGDTS-RKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCER 594 L+M R S DDE DG RKKLRL+++QS +LE+SF++++TLNP LRPRQ+EVWFQNRRAR+KLKQTE++CE+LKR +LTEEN RL +EV+ELRA+K+ P + ++LTMCP CER Sbjct: 112 LDMNRLPSSEDGDDEEFSHDDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEENHRLHREVEELRAMKVGP---TTVNSASSLTMCPRCER 248
BLAST of CF835501 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSI (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. indica GN=HOX18 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.467e-30 Identity = 71/134 (52.99%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 220 GISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR------ALKLSPQFYMQMTPPTTLTM---CPSCER 594 G S G +RKKL+L+K+QS +LE+SF+ HN L+ L+PRQVEVWFQNRRARTKLKQTEVDCEFLKRCCE+LTEEN++L+ E+ ELR A Q Y+Q M CPSCE+ Sbjct: 103 GGSGSGGGGGTRKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCESLTEENKQLKHELMELRRLASAAAAAAGSQLYVQFPRAAAAAMVNVCPSCEK 236 The following BLAST results are available for this feature:
BLAST of CF835501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835501 ID=CF835501; Name=CF835501; organism=Citrus sinensis; type=EST; length=767bpback to top |