CF835514

Overview
NameCF835514
Unique NameCF835514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF835514_ssr703 microsatellite CF835514_ssr703:703..714. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1117 contig Csv1_Contig1117:172..901. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835514 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 155.992 bits (393), Expect = 1.918e-37
Identity = 86/194 (44.33%), Postives = 118/194 (60.82%), Query Frame = 3
Query:    9 LVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGK-TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCK 587
            L E   ++E VP++    E +SPE+L   PFG++P +QDGD  L+ESRAI +Y A K +    ELL +  +EE  +V+ W+EVEA+ Y  A+  +  Q+L S   G   D+K+V E+ EKL K L+VYE RL+K KYLAGDF SLADL+H+  T  L        ++    HV AWW  +  RPS +KV  L K
Sbjct:   22 LEEAGSDYEIVPINFATAEHKSPEHLVRNPFGQVPALQDGDLYLFESRAICKYAARKNKP---ELLREGNLEEAAMVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFA-TPYASVLDAYPHVKAWWSGLMERPSVQKVAALMK 211          
BLAST of CF835514 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 153.295 bits (386), Expect = 1.243e-36
Identity = 79/193 (40.93%), Postives = 118/193 (61.14%), Query Frame = 3
Query:    3 LCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELL---GKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKV 572
            + L EK ++FE V V+L  GE +   +L   PFG++P  +DGD  L+ESRAI +Y A +Y +QGT LL    K I +  ++   ++VE H ++P   +L  + +F S +G   DE +V E + KL K LDVYE RL + KYLAG+ F+L DL HIP   YL+G   ++ +  +R  V+ W  +I+ RP+ +KV
Sbjct:   20 IALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLQTDSKNISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLLGTPTKK-LFTERPRVNEWVAEITKRPASEKV 211          
BLAST of CF835514 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.243e-36
Identity = 79/194 (40.72%), Postives = 119/194 (61.34%), Query Frame = 3
Query:    3 LCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELL---GKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 575
            + L EK ++FE V V+L  GE +   +L   PFG++P  +DGD  L+ESRAI +Y A +Y +QGT LL    K I +  ++   ++VEAH ++P   +L  + +F   +G   D+ +V E + KL K LDVYE RL + KYLAG+ F+L DL HIP   YL+G   ++ +  +R  V+ W  +I+ RP+ +KVL
Sbjct:   20 IALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLPADSKNIAQYAIMSIGIQVEAHQFDPVASKLAWEQVFKFNYGLNTDQAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPVIQYLLGTPTKK-LFTERPRVNEWVAEITKRPASEKVL 212          
BLAST of CF835514 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.724e-36
Identity = 77/191 (40.31%), Postives = 120/191 (62.83%), Query Frame = 3
Query:    3 LCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 575
            + L EK ++FE V V+L  GE +   ++   PFG++P  +DGDF ++ESRAI +Y A ++  +G  LL  T ++  ++   +E+E+H ++P   +L  + +    +G   D+ +V+E + KL K LDVYE RL +SKYLA D F+L DL  IP   YL+G   ++ +  +R HVSAW  DI++RPS +KVL
Sbjct:   20 IALHEKNVDFEFVHVELKDGEHKKEPFILRNPFGKVPAFEDGDFKIFESRAITQYIAHEFSDKGNNLLS-TGKDMAIIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKK-LFDERPHVSAWVADITSRPSAQKVL 208          
BLAST of CF835514 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 1.052e-35
Identity = 77/191 (40.31%), Postives = 118/191 (61.78%), Query Frame = 3
Query:    3 LCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 575
            + L EK ++FE V ++L  GE +   ++   PFG++P  +DGDF L+ESRAI +Y A  Y  +G +L+    ++   +   +E+E+H ++P   +L  + +    +G   D+ +V+E + KL K LDVYE RL +SKYLA D F+L DL  IP   YL+G   ++ +  +R HVSAW  DI++RPS KKVL
Sbjct:   20 IALHEKNLDFEFVHIELKDGEHKKEPFIFRNPFGKVPAFEDGDFKLFESRAITQYIAHFYSDKGNQLVSLGSKDIAGIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLLGTPTKK-LFDERPHVSAWVADITSRPSAKKVL 209          
BLAST of CF835514 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 3.062e-35
Identity = 80/193 (41.45%), Postives = 117/193 (60.62%), Query Frame = 3
Query:    3 LCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGK-TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLE 578
            L L E  +++E VP+    G+ R PE+L   PFG++PV++DGD  L+ESRAI R+   K++    ELLG   +E+  +V+ WLEVEAH  +P    + ++ +F+   GR  ++ +V E+ EKL K L+VYE RL+   YLAGDF SLADLS     H L+       ++    HVSAWW  ++ RP+  KV +
Sbjct:   22 LALEEAGVDYELVPMSRQDGDHRRPEHLARNPFGKVPVLEDGDLTLFESRAIARHVLRKHKP---ELLGGGRLEQTAMVDVWLEVEAHQLSPPAIAIVVECVFAPFLGRERNQAVVDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMA-TEYAALVHALPHVSAWWQGLAARPAANKVAQ 210          
BLAST of CF835514 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.520e-34
Identity = 85/206 (41.26%), Postives = 121/206 (58.74%), Query Frame = 3
Query:    3 LCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKY-RSQGTELLGKT--IEERGLVEQWLEVEAHNYNPAI----YELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHY-LVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCKTPF 596
            L L E   E+E VP+D + GE + P++++L PF ++P  QDGD +L+ESRAI +Y   KY  + G +LLG+   IEE  +V+ W EVEA  Y PAI    +E  I        G   ++ +V ES E+L   L +YE RL KS+YLAGD  + ADL+HIPFT Y +  P  +  +  D   V AWW+ +  RP+ ++V +   T F
Sbjct:   20 LFLEEVGAEYELVPMDFVAGEHKRPQHVQLNPFAKMPGFQDGDLVLFESRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAK--VFDDYPKVKAWWEMLMARPAVQRVCKHMPTEF 223          
BLAST of CF835514 vs. ExPASy Swiss-Prot
Match: GSTF2_WHEAT (Glutathione S-transferase 2 OS=Triticum aestivum GN=GSTA2 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.169e-32
Identity = 83/206 (40.29%), Postives = 119/206 (57.77%), Query Frame = 3
Query:    3 LCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYR-SQGTELLGKT--IEERGLVEQWLEVEAHNYNPAI----YELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHY-LVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCKTPF 596
            L L E   E+E VPVD + GE + P++++L PF ++P  QDG+ +  +SRAI +Y   KY  + G +LLG+   IEE  +V+ W EVEA  Y PAI    +E  I        G   ++ +V ES E+L   L +YE RL KS+YLAGD  S ADL+HIPFT Y +  P  +  +  +   V AWW+ +  RP+ ++V +   T F
Sbjct:   20 LFLEEVGAEYELVPVDFVAGEHKRPQHVQLNPFAKMPGFQDGESLHIKSRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSISFADLNHIPFTFYFMTTPYAK--VFDEYPKVKAWWEMLMARPAVQRVCKHMPTEF 223          
BLAST of CF835514 vs. ExPASy Swiss-Prot
Match: GSTF5_ARATH (Glutathione S-transferase PM239X14 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.873e-25
Identity = 71/178 (39.89%), Postives = 102/178 (57.30%), Query Frame = 3
Query:   24 IEFETVPVDLIKGEQRSPEYL-KLQPFGELPVIQDGDFI-LYESRAIMRYYAEKYRSQGTELLGKTIEER--GLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQ---HMIRDRKHVSAWW 536
            ++ + VPVDL+KGE + P YL    PFG +PV++D D   +YESRAI RY   KY  +G+ LL    + +  GL EQ   VE  +++P    L  + +F+   G   +E+L K+  + L   +D YE  LSK KYLAG+ F+LADL H+P+     G M  Q    ++  + HV AWW
Sbjct:   27 VDVKIVPVDLMKGEHKEPAYLDNYHPFGVIPVLEDEDGTKIYESRAISRYLVAKY-GKGSSLLPSPSDPKAYGLFEQAASVEYSSFDPPASSLAYERVFAGMRGLKTNEELAKKYVDTLNAKMDGYERILSKQKYLAGNDFTLADLFHLPY-----GAMVAQLEPTVLDSKPHVKAWW 198          
BLAST of CF835514 vs. ExPASy Swiss-Prot
Match: GST1C_ANOGA (Glutathione S-transferase 1, isoform C OS=Anopheles gambiae GN=GstD1 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13
Identity = 53/176 (30.11%), Postives = 89/176 (50.57%), Query Frame = 3
Query:   24 IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIP--FTHYLVGPMGRQHMIRDRKHVSAWWDDI 545
            +E      DL+KGE   PE+LK+ P   +P + D  F L+ESRAI  Y AEKY  +  +L  K  ++R +V Q +  +         +     +F+ +   P +E+ +K++   L   LD +       KY+AGD  ++ADLS +    T+ + G       +   +HV+AW+++I
Sbjct:   24 VELNLKLTDLMKGEHMKPEFLKINPQHCIPTLVDNGFALWESRAICTYLAEKY-GKDDKLYPKDPQKRAVVNQRMYFDMGTLYQRFADYYYPQIFAKQPANPENEQKMKDAVGFLNSFLDGH-------KYVAGDSLTIADLSILATISTYDVAG-----FDLAKYQHVAAWYENI 186          
The following BLAST results are available for this feature:
BLAST of CF835514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
GSTF1_MAIZE1.918e-3744.33Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GSTF4_ARATH1.243e-3640.93Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]
GST16_ARATH1.243e-3640.72Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF1_ARATH4.724e-3640.31Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GST11_ARATH1.052e-3540.31Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GSTF4_MAIZE3.062e-3541.45Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
GSTF1_WHEAT1.520e-3441.26Glutathione S-transferase 1 OS=Triticum aestivum G... [more]
GSTF2_WHEAT3.169e-3240.29Glutathione S-transferase 2 OS=Triticum aestivum G... [more]
GSTF5_ARATH2.873e-2539.89Glutathione S-transferase PM239X14 OS=Arabidopsis ... [more]
GST1C_ANOGA4.303e-1330.11Glutathione S-transferase 1, isoform C OS=Anophele... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01G04_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835514 ID=CF835514; Name=CF835514; organism=Citrus sinensis; type=EST; length=730bp
TTTTGTGCTTGGTTGAGAAGGAAATCGAATTTGAAACTGTCCCCGTTGAT
CTCATCAAAGGAGAGCAGAGAAGTCCTGAGTACCTCAAATTACAGCCTTT
TGGAGAGCTTCCTGTCATTCAAGATGGAGATTTTATTTTATACGAGTCGC
GAGCTATCATGAGGTACTACGCTGAAAAGTACAGGTCTCAAGGAACCGAA
CTTCTGGGTAAAACAATTGAAGAAAGAGGCCTGGTGGAACAGTGGCTAGA
AGTAGAGGCACACAACTACAACCCAGCAATTTACGAGCTGACCATCCAAC
TTTTATTTTCCTCCAAGTTTGGACGTCCCGTTGATGAAAAATTGGTGAAG
GAGAGTGACGAAAAGCTTGGAAAAACGCTCGACGTTTACGAGGAGAGGCT
GTCGAAGAGCAAGTATTTGGCTGGTGATTTCTTCAGCCTGGCTGATCTGA
GTCACATTCCATTTACCCACTACTTGGTTGGGCCGATGGGGAGACAGCAT
ATGATTAGAGACAGGAAGCATGTGAGTGCCTGGTGGGATGATATTAGCAA
CAGGCCGTCCTGGAAGAAAGTCCTTGAGCTCTGTAAGACTCCTTTCGGCT
GAGCTTGATTGTATGTGTTTCAATTTTCGGGCTTGTGTTTTACTTCTCTA
CTACTTGGNTTGTTTCTGTCTGTGGGATATGTTTCTTGCATATGTGTGTT
TCAAATAAATAAATGTTTGGAGTTGGAGCT
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