CF835514

Overview
NameCF835514
Unique NameCF835514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF835514 vs. ExPASy Swiss-Prot
Match: GSTA_RHILE (Protein gstA OS=Rhizobium leguminosarum GN=gstA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11
Identity = 44/145 (30.34%), Postives = 74/145 (51.03%), Query Frame = 3 
Query:   24 IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHN--YNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLS 452
            + +E V VDL  G  ++P++LKL PFG++PV+ D   ++ +S AI+ Y A KY    T+ L +       +++WL V A    Y P    L    +F + F    DE + +       + L + E  L   ++L GD  ++AD++
Sbjct:   24 VPYELVEVDLAAGAHKAPDFLKLNPFGQVPVLDDNGTVIADSSAILVYLARKYGR--TDWLPEEAVAAARIQKWLSVAAGEIAYGPCAARLV--TVFGADF--RTDEVIARAH-----RILALVEAELGARRFLLGDNATIADIA 157
The following BLAST results are available for this feature:
BLAST of CF835514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
GSTA_RHILE8.972e-1130.34Protein gstA OS=Rhizobium leguminosarum GN=gstA PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01G04_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835514 ID=CF835514; Name=CF835514; organism=Citrus sinensis; type=EST; length=730bp
TTTTGTGCTTGGTTGAGAAGGAAATCGAATTTGAAACTGTCCCCGTTGAT
CTCATCAAAGGAGAGCAGAGAAGTCCTGAGTACCTCAAATTACAGCCTTT
TGGAGAGCTTCCTGTCATTCAAGATGGAGATTTTATTTTATACGAGTCGC
GAGCTATCATGAGGTACTACGCTGAAAAGTACAGGTCTCAAGGAACCGAA
CTTCTGGGTAAAACAATTGAAGAAAGAGGCCTGGTGGAACAGTGGCTAGA
AGTAGAGGCACACAACTACAACCCAGCAATTTACGAGCTGACCATCCAAC
TTTTATTTTCCTCCAAGTTTGGACGTCCCGTTGATGAAAAATTGGTGAAG
GAGAGTGACGAAAAGCTTGGAAAAACGCTCGACGTTTACGAGGAGAGGCT
GTCGAAGAGCAAGTATTTGGCTGGTGATTTCTTCAGCCTGGCTGATCTGA
GTCACATTCCATTTACCCACTACTTGGTTGGGCCGATGGGGAGACAGCAT
ATGATTAGAGACAGGAAGCATGTGAGTGCCTGGTGGGATGATATTAGCAA
CAGGCCGTCCTGGAAGAAAGTCCTTGAGCTCTGTAAGACTCCTTTCGGCT
GAGCTTGATTGTATGTGTTTCAATTTTCGGGCTTGTGTTTTACTTCTCTA
CTACTTGGNTTGTTTCTGTCTGTGGGATATGTTTCTTGCATATGTGTGTT
TCAAATAAATAAATGTTTGGAGTTGGAGCT
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